RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-231ENST00000477334 KRTAP2-4Q9BYR9 128 aa0.6□□□□□ -2.31
RBM39-231ENST00000477334 ST20Q9HBF5 79 aa0.6□□□□□ -2.31
RBM39-231ENST00000477334 CRIPTQ9P021 101 aa0.6□□□□□ -2.31
RBM39-231ENST00000477334 PARP4Q9UKK3 1724 aaKnown RBP0.6□□□□□ -2.31
RBM39-231ENST00000477334 CMYA5Q8N3K9 4069 aa0.6□□□□□ -2.31
RBM39-231ENST00000477334 MYH4Q9Y623 1939 aa0.6□□□□□ -2.31
RBM39-231ENST00000477334 PKHD1P08F94 4074 aa0.59□□□□□ -2.31
RBM39-231ENST00000477334 ERICH3Q5RHP9 1530 aa0.59□□□□□ -2.31
RBM39-231ENST00000477334 I3L3M4 83 aa0.59□□□□□ -2.31
RBM39-231ENST00000477334 RPL38P63173 70 aaKnown RBP0.59□□□□□ -2.31
RBM39-231ENST00000477334 TDRG1Q3Y452 100 aa0.59□□□□□ -2.31
RBM39-231ENST00000477334 SMIM5Q71RC9 77 aa0.59□□□□□ -2.31
RBM39-231ENST00000477334 SACSQ9NZJ4 4579 aa0.59□□□□□ -2.32
RBM39-231ENST00000477334 LMO7Q8WWI1 1683 aa0.59□□□□□ -2.32
RBM39-231ENST00000477334 ABCC6O95255 1503 aa0.59□□□□□ -2.32
RBM39-231ENST00000477334 ABCA10Q8WWZ4 1543 aa0.59□□□□□ -2.32
RBM39-231ENST00000477334 DNAH7Q8WXX0 4024 aa0.58□□□□□ -2.32
RBM39-231ENST00000477334 MUC12Q9UKN1 5478 aa0.58□□□□□ -2.32
RBM39-231ENST00000477334 KNL1Q8NG31 2342 aa0.58□□□□□ -2.32
RBM39-231ENST00000477334 KRTAP2-1Q9BYU5 128 aa0.58□□□□□ -2.32
RBM39-231ENST00000477334 SYCP2Q9BX26 1530 aa0.58□□□□□ -2.32
RBM39-231ENST00000477334 AKAP6Q13023 2319 aa0.58□□□□□ -2.32
RBM39-231ENST00000477334 PRXQ9BXM0 1461 aa0.57□□□□□ -2.32
RBM39-231ENST00000477334 LCE6AA0A183 80 aa0.57□□□□□ -2.32
RBM39-231ENST00000477334 SPRR1AP35321 89 aa0.57□□□□□ -2.32
RBM39-231ENST00000477334 MUC5BQ9HC84 5762 aaPredicted RBP0.57□□□□□ -2.32
RBM39-231ENST00000477334 WNK2Q9Y3S1 2297 aa0.57□□□□□ -2.32
RBM39-231ENST00000477334 PLCE1Q9P212 2302 aa0.56□□□□□ -2.32
RBM39-231ENST00000477334 TOGARAM1Q9Y4F4 1720 aa0.56□□□□□ -2.32
RBM39-231ENST00000477334 RGPD8O14715 1765 aaPredicted RBP0.56□□□□□ -2.32
RBM39-231ENST00000477334 RGPD5Q99666 1765 aa0.56□□□□□ -2.32
RBM39-231ENST00000477334 LOC730098B7Z3J9 87 aa0.56□□□□□ -2.32
RBM39-231ENST00000477334 NDUFB1O75438 58 aa0.56□□□□□ -2.32
RBM39-231ENST00000477334 LELP1Q5T871 98 aa0.56□□□□□ -2.32
RBM39-231ENST00000477334 GAFA1Q96PS6 74 aa0.56□□□□□ -2.32
RBM39-231ENST00000477334 DNAH1Q9P2D7 4330 aa0.56□□□□□ -2.32
RBM39-231ENST00000477334 C4AP0C0L4 1744 aa0.55□□□□□ -2.32
RBM39-231ENST00000477334 DDX60LQ5H9U9 1706 aaKnown RBP0.55□□□□□ -2.32
RBM39-231ENST00000477334 TRPM2O94759 1503 aa0.55□□□□□ -2.32
RBM39-231ENST00000477334 LRP2P98164 4655 aa0.55□□□□□ -2.32
RBM39-231ENST00000477334 CPSF4LA6NMK7 179 aaKnown RBP0.55□□□□□ -2.32
RBM39-231ENST00000477334 WFDC9Q8NEX5 89 aa0.55□□□□□ -2.32
RBM39-231ENST00000477334 KIF20BQ96Q89 1820 aa0.54□□□□□ -2.32
RBM39-231ENST00000477334 HSPG2P98160 4391 aa0.54□□□□□ -2.32
RBM39-231ENST00000477334 SPINK4O60575 86 aa0.54□□□□□ -2.32
RBM39-231ENST00000477334 SPRR1BP22528 89 aa0.54□□□□□ -2.32
RBM39-231ENST00000477334 COX7BP24311 80 aa0.54□□□□□ -2.32
RBM39-231ENST00000477334 ATP5EP2Q5VTU8 51 aa0.54□□□□□ -2.32
RBM39-231ENST00000477334 DEFB124Q8NES8 71 aa0.54□□□□□ -2.32
RBM39-231ENST00000477334 U3KQA8 63 aa0.54□□□□□ -2.32
RBM39-231ENST00000477334 MDN1Q9NU22 5596 aa0.54□□□□□ -2.32
RBM39-231ENST00000477334 USH2AO75445 5202 aa0.53□□□□□ -2.32
RBM39-231ENST00000477334 CDC42BPGQ6DT37 1551 aa0.53□□□□□ -2.32
RBM39-231ENST00000477334 DYNC2H1Q8NCM8 4307 aaKnown RBP0.53□□□□□ -2.32
RBM39-231ENST00000477334 KIF1AQ12756 1690 aa0.53□□□□□ -2.32
RBM39-231ENST00000477334 DDX60Q8IY21 1712 aaKnown RBP0.53□□□□□ -2.32
RBM39-231ENST00000477334 MYO5CQ9NQX4 1742 aa0.53□□□□□ -2.32
RBM39-231ENST00000477334 H3BUT2 72 aa0.53□□□□□ -2.32
RBM39-231ENST00000477334 CCL22O00626 93 aa0.53□□□□□ -2.32
RBM39-231ENST00000477334 DEFB105AQ8NG35 78 aa0.53□□□□□ -2.32
RBM39-231ENST00000477334 DNAH9Q9NYC9 4486 aa0.53□□□□□ -2.32
RBM39-231ENST00000477334 DYNC1H1Q14204 4646 aaKnown RBP0.53□□□□□ -2.32
RBM39-231ENST00000477334 MYCBP2O75592 4640 aa0.53□□□□□ -2.33
RBM39-231ENST00000477334 IQGAP2Q13576 1575 aa0.53□□□□□ -2.33
RBM39-231ENST00000477334 EIF2AK4Q9P2K8 1649 aaKnown RBP0.53□□□□□ -2.33
RBM39-231ENST00000477334 DOT1LQ8TEK3 1739 aa0.52□□□□□ -2.33
RBM39-231ENST00000477334 MUC5ACP98088 5654 aa0.52□□□□□ -2.33
RBM39-231ENST00000477334 TRAV21A0A0B4J279 112 aa0.52□□□□□ -2.33
RBM39-231ENST00000477334 NFAT5O94916 1531 aa0.52□□□□□ -2.33
RBM39-231ENST00000477334 FAM208AQ9UK61 1670 aaKnown RBP0.52□□□□□ -2.33
RBM39-231ENST00000477334 CDC42BPAQ5VT25 1732 aa0.52□□□□□ -2.33
RBM39-231ENST00000477334 ANKRD36A6QL64 1941 aa0.52□□□□□ -2.33
RBM39-231ENST00000477334 TNCP24821 2201 aa0.52□□□□□ -2.33
RBM39-231ENST00000477334 USF3Q68DE3 2245 aa0.52□□□□□ -2.33
RBM39-231ENST00000477334 A0A087WXM4 84 aa0.51□□□□□ -2.33
RBM39-231ENST00000477334 HEPN1Q6WQI6 88 aa0.51□□□□□ -2.33
RBM39-231ENST00000477334 HUWE1Q7Z6Z7 4374 aaKnown RBP0.51□□□□□ -2.33
RBM39-231ENST00000477334 MRPL34Q9BQ48 92 aaKnown RBP0.51□□□□□ -2.33
RBM39-231ENST00000477334 APLNQ9ULZ1 77 aa0.51□□□□□ -2.33
RBM39-231ENST00000477334 BCORQ6W2J9 1755 aa0.5□□□□□ -2.33
RBM39-231ENST00000477334 PIK3C2BO00750 1634 aa0.5□□□□□ -2.33
RBM39-231ENST00000477334 ANK3Q12955 4377 aaKnown RBP0.5□□□□□ -2.33
RBM39-231ENST00000477334 BVES-AS1Q5T3Y7 98 aa0.5□□□□□ -2.33
RBM39-231ENST00000477334 ALMS1Q8TCU4 4167 aa0.5□□□□□ -2.33
RBM39-231ENST00000477334 RGPD2P0DJD1 1756 aa0.5□□□□□ -2.33
RBM39-231ENST00000477334 FAT2Q9NYQ8 4349 aa0.5□□□□□ -2.33
RBM39-231ENST00000477334 DUOX1Q9NRD9 1551 aa0.49□□□□□ -2.33
RBM39-231ENST00000477334 PLECQ15149 4684 aaKnown RBP0.49□□□□□ -2.33
RBM39-231ENST00000477334 LRP1BQ9NZR2 4599 aa0.49□□□□□ -2.33
RBM39-231ENST00000477334 KRTAP21-1Q3LI58 79 aa0.49□□□□□ -2.33
RBM39-231ENST00000477334 UBR3Q6ZT12 1888 aa0.48□□□□□ -2.33
RBM39-231ENST00000477334 FAT3Q8TDW7 4589 aa0.48□□□□□ -2.33
RBM39-231ENST00000477334 C4BP0C0L5 1744 aa0.48□□□□□ -2.33
RBM39-231ENST00000477334 PLXNC1O60486 1568 aa0.48□□□□□ -2.33
RBM39-231ENST00000477334 PKD1P98161 4303 aa0.47□□□□□ -2.33
RBM39-231ENST00000477334 ANKARQ7Z5J8 1434 aa0.47□□□□□ -2.33
RBM39-231ENST00000477334 IFI27P40305 119 aaPredicted RBP0.47□□□□□ -2.33
RBM39-231ENST00000477334 KLK9Q2XQG4 91 aa0.47□□□□□ -2.33
RBM39-231ENST00000477334 VPS13BQ7Z7G8 4022 aa0.47□□□□□ -2.33
RBM39-231ENST00000477334 ANKRD50Q9ULJ7 1429 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms