RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 VWFP04275 2813 aa0.35□□□□□ -2.35
NPHP3-207ENST00000476742 POLQO75417 2590 aa0.35□□□□□ -2.35
NPHP3-207ENST00000476742 CHD8Q9HCK8 2581 aa0.35□□□□□ -2.35
NPHP3-207ENST00000476742 CD52P31358 61 aa0.35□□□□□ -2.35
NPHP3-207ENST00000476742 DEFB136Q30KP8 78 aa0.35□□□□□ -2.35
NPHP3-207ENST00000476742 WNK1Q9H4A3 2382 aa0.35□□□□□ -2.35
NPHP3-207ENST00000476742 NAV2Q8IVL1 2488 aa0.35□□□□□ -2.35
NPHP3-207ENST00000476742 CHD7Q9P2D1 2997 aa0.34□□□□□ -2.35
NPHP3-207ENST00000476742 DMBT1Q9UGM3 2413 aaPredicted RBP0.34□□□□□ -2.35
NPHP3-207ENST00000476742 CHD6Q8TD26 2715 aa0.34□□□□□ -2.35
NPHP3-207ENST00000476742 UBR5O95071 2799 aaPredicted RBP0.34□□□□□ -2.36
NPHP3-207ENST00000476742 KRTAP2-3P0C7H8 128 aa0.34□□□□□ -2.36
NPHP3-207ENST00000476742 DEFB133Q30KQ1 61 aa0.34□□□□□ -2.36
NPHP3-207ENST00000476742 KRTAP21-1Q3LI58 79 aa0.34□□□□□ -2.36
NPHP3-207ENST00000476742 KRTAP2-4Q9BYR9 128 aa0.34□□□□□ -2.36
NPHP3-207ENST00000476742 KRTAP2-1Q9BYU5 128 aa0.34□□□□□ -2.36
NPHP3-207ENST00000476742 HECTD1Q9ULT8 2610 aa0.34□□□□□ -2.36
NPHP3-207ENST00000476742 TENM2Q9NT68 2774 aa0.34□□□□□ -2.36
NPHP3-207ENST00000476742 ATRQ13535 2644 aa0.34□□□□□ -2.36
NPHP3-207ENST00000476742 APC2O95996 2303 aa0.33□□□□□ -2.36
NPHP3-207ENST00000476742 AKAP13Q12802 2813 aa0.33□□□□□ -2.36
NPHP3-207ENST00000476742 NBASA2RRP1 2371 aa0.33□□□□□ -2.36
NPHP3-207ENST00000476742 STATHP02808 62 aa0.33□□□□□ -2.36
NPHP3-207ENST00000476742 DEFB1P60022 68 aa0.33□□□□□ -2.36
NPHP3-207ENST00000476742 DEFB124Q8NES8 71 aa0.33□□□□□ -2.36
NPHP3-207ENST00000476742 DEFB108BQ8NET1 73 aa0.33□□□□□ -2.36
NPHP3-207ENST00000476742 HIVEP3Q5T1R4 2406 aa0.33□□□□□ -2.36
NPHP3-207ENST00000476742 BDP1A6H8Y1 2624 aa0.33□□□□□ -2.36
NPHP3-207ENST00000476742 CCDC168Q8NDH2 2452 aa0.32□□□□□ -2.36
NPHP3-207ENST00000476742 MTORP42345 2549 aa0.32□□□□□ -2.36
NPHP3-207ENST00000476742 TNRC18O15417 2968 aaPredicted RBP0.32□□□□□ -2.36
NPHP3-207ENST00000476742 PRM1P04553 51 aa0.32□□□□□ -2.36
NPHP3-207ENST00000476742 APCP25054 2843 aa0.32□□□□□ -2.36
NPHP3-207ENST00000476742 PTPN13Q12923 2485 aa0.31□□□□□ -2.36
NPHP3-207ENST00000476742 NCOR2Q9Y618 2525 aa0.31□□□□□ -2.36
NPHP3-207ENST00000476742 A0A096LPF7 62 aa0.31□□□□□ -2.36
NPHP3-207ENST00000476742 PHGR1C9JFL3 82 aa0.31□□□□□ -2.36
NPHP3-207ENST00000476742 RPS29P62273 56 aaKnown RBP0.31□□□□□ -2.36
NPHP3-207ENST00000476742 COX14Q96I36 57 aa0.31□□□□□ -2.36
NPHP3-207ENST00000476742 OTOGQ6ZRI0 2925 aa0.31□□□□□ -2.36
NPHP3-207ENST00000476742 SPTBN4Q9H254 2564 aa0.31□□□□□ -2.36
NPHP3-207ENST00000476742 ACANP16112 2415 aa0.3□□□□□ -2.36
NPHP3-207ENST00000476742 PKD1L1Q8TDX9 2849 aa0.3□□□□□ -2.36
NPHP3-207ENST00000476742 BSNQ9UPA5 3926 aa0.3□□□□□ -2.36
NPHP3-207ENST00000476742 LINC01556Q5JQF7 62 aa0.3□□□□□ -2.36
NPHP3-207ENST00000476742 KRTAP8-1Q8IUC2 63 aa0.3□□□□□ -2.36
NPHP3-207ENST00000476742 FRYQ5TBA9 3013 aa0.3□□□□□ -2.36
NPHP3-207ENST00000476742 MGAQ8IWI9 3026 aa0.3□□□□□ -2.36
NPHP3-207ENST00000476742 NF1P21359 2839 aa0.3□□□□□ -2.36
NPHP3-207ENST00000476742 CSMD3Q7Z407 3707 aa0.3□□□□□ -2.36
NPHP3-207ENST00000476742 DCHS2Q6V1P9 2916 aa0.3□□□□□ -2.36
NPHP3-207ENST00000476742 FAM186AA6NE01 2351 aa0.3□□□□□ -2.36
NPHP3-207ENST00000476742 PIEZO1Q92508 2521 aa0.29□□□□□ -2.36
NPHP3-207ENST00000476742 UNC79Q9P2D8 2635 aa0.29□□□□□ -2.36
NPHP3-207ENST00000476742 SPRR2DP22532 72 aa0.29□□□□□ -2.36
NPHP3-207ENST00000476742 SPRR2BP35325 72 aa0.29□□□□□ -2.36
NPHP3-207ENST00000476742 RIF1Q5UIP0 2472 aaKnown RBP0.29□□□□□ -2.36
NPHP3-207ENST00000476742 LYSTQ99698 3801 aa0.29□□□□□ -2.36
NPHP3-207ENST00000476742 MAP1BP46821 2468 aaKnown RBP0.28□□□□□ -2.36
NPHP3-207ENST00000476742 MT1AP04731 61 aa0.28□□□□□ -2.36
NPHP3-207ENST00000476742 COL12A1Q99715 3063 aa0.28□□□□□ -2.36
NPHP3-207ENST00000476742 LRRK2Q5S007 2527 aa0.28□□□□□ -2.36
NPHP3-207ENST00000476742 SETD2Q9BYW2 2564 aaPredicted RBP0.28□□□□□ -2.37
NPHP3-207ENST00000476742 USP24Q9UPU5 2620 aa0.28□□□□□ -2.37
NPHP3-207ENST00000476742 FLNCQ14315 2725 aa0.28□□□□□ -2.37
NPHP3-207ENST00000476742 SPG11Q96JI7 2443 aa0.27□□□□□ -2.37
NPHP3-207ENST00000476742 SETXQ7Z333 2677 aaKnown RBP0.27□□□□□ -2.37
NPHP3-207ENST00000476742 GCN1Q92616 2671 aaKnown RBP0.27□□□□□ -2.37
NPHP3-207ENST00000476742 NBEAL2Q6ZNJ1 2754 aa0.27□□□□□ -2.37
NPHP3-207ENST00000476742 HTN3P15516 51 aa0.27□□□□□ -2.37
NPHP3-207ENST00000476742 SPRR2AP35326 72 aa0.27□□□□□ -2.37
NPHP3-207ENST00000476742 DMXL1Q9Y485 3027 aa0.27□□□□□ -2.37
NPHP3-207ENST00000476742 SONP18583 2426 aaKnown RBP0.27□□□□□ -2.37
NPHP3-207ENST00000476742 FLNBO75369 2602 aaKnown RBP0.27□□□□□ -2.37
NPHP3-207ENST00000476742 FRAS1Q86XX4 4008 aa0.27□□□□□ -2.37
NPHP3-207ENST00000476742 ACACBO00763 2458 aa0.26□□□□□ -2.37
NPHP3-207ENST00000476742 ZFYVE26Q68DK2 2539 aa0.26□□□□□ -2.37
NPHP3-207ENST00000476742 EPG5Q9HCE0 2579 aa0.26□□□□□ -2.37
NPHP3-207ENST00000476742 UTP20O75691 2785 aaKnown RBP0.26□□□□□ -2.37
NPHP3-207ENST00000476742 PDZD2O15018 2839 aa0.26□□□□□ -2.37
NPHP3-207ENST00000476742 NBEAQ8NFP9 2946 aa0.26□□□□□ -2.37
NPHP3-207ENST00000476742 ZZEF1O43149 2961 aa0.26□□□□□ -2.37
NPHP3-207ENST00000476742 SMR3BP02814 79 aaPredicted RBP0.26□□□□□ -2.37
NPHP3-207ENST00000476742 ANKRD11Q6UB99 2663 aaPredicted RBP0.26□□□□□ -2.37
NPHP3-207ENST00000476742 ANK2Q01484 3957 aa0.25□□□□□ -2.37
NPHP3-207ENST00000476742 CRYBG3Q68DQ2 2970 aa0.25□□□□□ -2.37
NPHP3-207ENST00000476742 ITPR3Q14573 2671 aa0.25□□□□□ -2.37
NPHP3-207ENST00000476742 CEP250Q9BV73 2442 aa0.25□□□□□ -2.37
NPHP3-207ENST00000476742 COL7A1Q02388 2944 aa0.25□□□□□ -2.37
NPHP3-207ENST00000476742 MAST4O15021 2626 aa0.25□□□□□ -2.37
NPHP3-207ENST00000476742 TNXBP22105 4242 aa0.24□□□□□ -2.37
NPHP3-207ENST00000476742 TACC2O95359 2948 aa0.24□□□□□ -2.37
NPHP3-207ENST00000476742 HRNRQ86YZ3 2850 aaPredicted RBP0.24□□□□□ -2.37
NPHP3-207ENST00000476742 STAB1Q9NY15 2570 aa0.24□□□□□ -2.37
NPHP3-207ENST00000476742 CACNA1AO00555 2505 aa0.24□□□□□ -2.37
NPHP3-207ENST00000476742 ANKHD1Q8IWZ3 2542 aaKnown RBP0.24□□□□□ -2.37
NPHP3-207ENST00000476742 CELSR3Q9NYQ7 3312 aa0.24□□□□□ -2.37
NPHP3-207ENST00000476742 SPRR2EP22531 72 aa0.24□□□□□ -2.37
NPHP3-207ENST00000476742 WDR87Q6ZQQ6 2873 aa0.24□□□□□ -2.37
NPHP3-207ENST00000476742 ZANQ9Y493 2812 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms