RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 SIGMAR1Q99720 223 aa7.9□□□□□ -1.14
CCNL1-217ENST00000476367 A0A1B0GW54 56 aa7.89□□□□□ -1.15
CCNL1-217ENST00000476367 DEFB116Q30KQ4 102 aa7.89□□□□□ -1.15
CCNL1-217ENST00000476367 XP32Q5T750 250 aa7.89□□□□□ -1.15
CCNL1-217ENST00000476367 ACYP1P07311 99 aa7.86□□□□□ -1.15
CCNL1-217ENST00000476367 MUC2Q02817 5179 aa7.86□□□□□ -1.15
CCNL1-217ENST00000476367 SCGB1A1P11684 91 aa7.85□□□□□ -1.15
CCNL1-217ENST00000476367 IGKV4-1P06312 121 aa7.82□□□□□ -1.16
CCNL1-217ENST00000476367 PCP4P48539 62 aa7.82□□□□□ -1.16
CCNL1-217ENST00000476367 C21orf62-AS1Q17RA5 79 aa7.82□□□□□ -1.16
CCNL1-217ENST00000476367 LINC00846Q9NV44 126 aa7.82□□□□□ -1.16
CCNL1-217ENST00000476367 MUC17Q685J3 4493 aa7.82□□□□□ -1.16
CCNL1-217ENST00000476367 NOTCH2NLQ7Z3S9 236 aa7.81□□□□□ -1.16
CCNL1-217ENST00000476367 MT-ATP8P03928 68 aa7.8□□□□□ -1.16
CCNL1-217ENST00000476367 SEC61BP60468 96 aaKnown RBP7.8□□□□□ -1.16
CCNL1-217ENST00000476367 Q6ZVQ6 151 aa7.78□□□□□ -1.16
CCNL1-217ENST00000476367 NREPQ16612 68 aa7.78□□□□□ -1.16
CCNL1-217ENST00000476367 DSCR10P59022 87 aa7.76□□□□□ -1.17
CCNL1-217ENST00000476367 IGKV3D-7A0A0C4DH55 119 aa7.74□□□□□ -1.17
CCNL1-217ENST00000476367 KRTAP16-1A8MUX0 517 aa7.74□□□□□ -1.17
CCNL1-217ENST00000476367 J3KT08 172 aa7.74□□□□□ -1.17
CCNL1-217ENST00000476367 RPL37P61927 97 aaKnown RBP7.74□□□□□ -1.17
CCNL1-217ENST00000476367 PCOTHQ58A44 107 aa7.74□□□□□ -1.17
CCNL1-217ENST00000476367 A0A1B0GVX0 72 aa7.73□□□□□ -1.17
CCNL1-217ENST00000476367 LINC00643Q86TS7 51 aa7.73□□□□□ -1.17
CCNL1-217ENST00000476367 A8MWP4 228 aa7.72□□□□□ -1.17
CCNL1-217ENST00000476367 IGHV6-1A0A0B4J1U7 121 aa7.71□□□□□ -1.17
CCNL1-217ENST00000476367 KRTAP4-1Q9BYQ7 146 aa7.7□□□□□ -1.18
CCNL1-217ENST00000476367 K7EQZ3 153 aa7.69□□□□□ -1.18
CCNL1-217ENST00000476367 LINC00313P59037 77 aa7.69□□□□□ -1.18
CCNL1-217ENST00000476367 PRR15Q8IV56 129 aa7.69□□□□□ -1.18
CCNL1-217ENST00000476367 IMUPQ9GZP8 106 aa7.69□□□□□ -1.18
CCNL1-217ENST00000476367 UBL5Q9BZL1 73 aa7.68□□□□□ -1.18
CCNL1-217ENST00000476367 BPY2O14599 106 aa7.67□□□□□ -1.18
CCNL1-217ENST00000476367 Q8N9L7 120 aa7.67□□□□□ -1.18
CCNL1-217ENST00000476367 C20orf166-AS1Q96NR2 134 aa7.67□□□□□ -1.18
CCNL1-217ENST00000476367 Q75L30 129 aa7.67□□□□□ -1.18
CCNL1-217ENST00000476367 A8MUU9 505 aa7.66□□□□□ -1.18
CCNL1-217ENST00000476367 A0A0U1RQV1 116 aa7.64□□□□□ -1.19
CCNL1-217ENST00000476367 C8orf17Q9NRJ1 99 aa7.64□□□□□ -1.19
CCNL1-217ENST00000476367 MMP24-AS1A0A0U1RRL7 71 aa7.63□□□□□ -1.19
CCNL1-217ENST00000476367 C8orf87E5RJ46 101 aa7.63□□□□□ -1.19
CCNL1-217ENST00000476367 NDUFB1O75438 58 aa7.63□□□□□ -1.19
CCNL1-217ENST00000476367 ATP5EP2Q5VTU8 51 aa7.62□□□□□ -1.19
CCNL1-217ENST00000476367 ATP11AUNQ6ZP68 121 aa7.62□□□□□ -1.19
CCNL1-217ENST00000476367 FAT4Q6V0I7 4981 aa7.61□□□□□ -1.19
CCNL1-217ENST00000476367 CXCL6P80162 114 aa7.6□□□□□ -1.19
CCNL1-217ENST00000476367 Q8N9P0 234 aaPredicted RBP7.59□□□□□ -1.19
CCNL1-217ENST00000476367 ANAPC13Q9BS18 74 aa7.56□□□□□ -1.2
CCNL1-217ENST00000476367 hDV103S1A0JD37 113 aa7.54□□□□□ -1.2
CCNL1-217ENST00000476367 TMEM254Q8TBM7 123 aa7.53□□□□□ -1.2
CCNL1-217ENST00000476367 FAM236AA0A1B0GUQ0 79 aa7.52□□□□□ -1.2
CCNL1-217ENST00000476367 FAM236BA0A1B0GV22 79 aa7.52□□□□□ -1.2
CCNL1-217ENST00000476367 HIST1H4AP62805 103 aaKnown RBP7.52□□□□□ -1.2
CCNL1-217ENST00000476367 MRPL34Q9BQ48 92 aaKnown RBP7.52□□□□□ -1.21
CCNL1-217ENST00000476367 WFDC13Q8IUB5 93 aa7.51□□□□□ -1.21
CCNL1-217ENST00000476367 CASC2Q6XLA1 102 aa7.49□□□□□ -1.21
CCNL1-217ENST00000476367 HCG22E2RYF7 251 aa7.49□□□□□ -1.21
CCNL1-217ENST00000476367 KRTAP19-2Q3LHN2 52 aa7.47□□□□□ -1.21
CCNL1-217ENST00000476367 ATOX1O00244 68 aa7.46□□□□□ -1.21
CCNL1-217ENST00000476367 ZCCHC13Q8WW36 166 aaKnown RBP7.45□□□□□ -1.22
CCNL1-217ENST00000476367 A0A087WVE0 104 aa7.44□□□□□ -1.22
CCNL1-217ENST00000476367 Q5W150 140 aa7.44□□□□□ -1.22
CCNL1-217ENST00000476367 NDUFS5O43920 106 aa7.42□□□□□ -1.22
CCNL1-217ENST00000476367 COX6B2Q6YFQ2 88 aa7.41□□□□□ -1.22
CCNL1-217ENST00000476367 CCDC179H3BU77 68 aa7.38□□□□□ -1.23
CCNL1-217ENST00000476367 UQCRQO14949 82 aa7.38□□□□□ -1.23
CCNL1-217ENST00000476367 COX7CP15954 63 aa7.37□□□□□ -1.23
CCNL1-217ENST00000476367 SERP2Q8N6R1 65 aa7.37□□□□□ -1.23
CCNL1-217ENST00000476367 SMIM20Q8N5G0 67 aa7.34□□□□□ -1.23
CCNL1-217ENST00000476367 HRES1P13985 223 aa7.34□□□□□ -1.24
CCNL1-217ENST00000476367 SPINK7P58062 85 aa7.33□□□□□ -1.24
CCNL1-217ENST00000476367 MT1HP80294 61 aa7.33□□□□□ -1.24
CCNL1-217ENST00000476367 MPLKIPQ8TAP9 179 aa7.33□□□□□ -1.24
CCNL1-217ENST00000476367 FLGP20930 4061 aaPredicted RBP7.32□□□□□ -1.24
CCNL1-217ENST00000476367 TRAV7A0A075B6U4 112 aa7.3□□□□□ -1.24
CCNL1-217ENST00000476367 FAM236DA0A1B0GTK5 79 aa7.29□□□□□ -1.24
CCNL1-217ENST00000476367 FAM236CP0DP71 79 aa7.29□□□□□ -1.24
CCNL1-217ENST00000476367 TP53AIP1Q9HCN2 124 aa7.28□□□□□ -1.24
CCNL1-217ENST00000476367 RBM12B-AS1Q9P1G2 102 aa7.27□□□□□ -1.25
CCNL1-217ENST00000476367 OCR1Q9BZK8 76 aa7.27□□□□□ -1.25
CCNL1-217ENST00000476367 M0R2T5 61 aa7.25□□□□□ -1.25
CCNL1-217ENST00000476367 IGKV2D-30A0A075B6S6 120 aa7.24□□□□□ -1.25
CCNL1-217ENST00000476367 IGKV2-30P06310 120 aa7.24□□□□□ -1.25
CCNL1-217ENST00000476367 KRTAP4-8Q9BYQ9 185 aa7.23□□□□□ -1.25
CCNL1-217ENST00000476367 C7orf65Q6ZTY9 151 aa7.21□□□□□ -1.26
CCNL1-217ENST00000476367 TRAV22A0A0B4J277 110 aa7.2□□□□□ -1.26
CCNL1-217ENST00000476367 KLKP1Q107X0 134 aa7.16□□□□□ -1.26
CCNL1-217ENST00000476367 C20orf197Q8N268 126 aa7.16□□□□□ -1.26
CCNL1-217ENST00000476367 H0Y9P7 68 aa7.15□□□□□ -1.27
CCNL1-217ENST00000476367 KRTAP10-6P60371 365 aaPredicted RBP7.15□□□□□ -1.27
CCNL1-217ENST00000476367 TMEM258P61165 79 aa7.15□□□□□ -1.27
CCNL1-217ENST00000476367 CYP4F30PQ9H0H9 118 aa7.15□□□□□ -1.27
CCNL1-217ENST00000476367 CYSTM1Q9H1C7 97 aa7.15□□□□□ -1.27
CCNL1-217ENST00000476367 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.11□□□□□ -1.27
CCNL1-217ENST00000476367 C4orf26Q17RF5 130 aa7.11□□□□□ -1.27
CCNL1-217ENST00000476367 KRTAP3-1Q9BYR8 98 aa7.11□□□□□ -1.27
CCNL1-217ENST00000476367 NDUFC1O43677 76 aa7.1□□□□□ -1.27
CCNL1-217ENST00000476367 KRTAP9-2Q9BYQ4 174 aa7.1□□□□□ -1.27
CCNL1-217ENST00000476367 LOC101927531A0A1B0GV80 90 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms