RNA–Protein interactions for RNA: ENST00000470121.5

CCNL1-212, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-212ENST00000470121 FAM236DA0A1B0GTK5 79 aa8.02□□□□□ -1.12
CCNL1-212ENST00000470121 FAM236CP0DP71 79 aa8.02□□□□□ -1.12
CCNL1-212ENST00000470121 SMR3BP02814 79 aaPredicted RBP8.02□□□□□ -1.13
CCNL1-212ENST00000470121 KRTAP10-4P60372 401 aaPredicted RBP8.02□□□□□ -1.13
CCNL1-212ENST00000470121 NOTCH2NLQ7Z3S9 236 aa8.02□□□□□ -1.13
CCNL1-212ENST00000470121 C1orf195Q5TG92 126 aa7.98□□□□□ -1.13
CCNL1-212ENST00000470121 TYMSOSQ8TAI1 123 aa7.98□□□□□ -1.13
CCNL1-212ENST00000470121 FAT1Q14517 4588 aa7.97□□□□□ -1.13
CCNL1-212ENST00000470121 MP68P56378 58 aa7.97□□□□□ -1.13
CCNL1-212ENST00000470121 MRPL34Q9BQ48 92 aaKnown RBP7.97□□□□□ -1.13
CCNL1-212ENST00000470121 H0Y9P7 68 aa7.96□□□□□ -1.13
CCNL1-212ENST00000470121 H3BPC8 53 aa7.96□□□□□ -1.14
CCNL1-212ENST00000470121 OXTP01178 125 aa7.96□□□□□ -1.14
CCNL1-212ENST00000470121 TP53AIP1Q9HCN2 124 aa7.96□□□□□ -1.14
CCNL1-212ENST00000470121 ATP5EP56381 51 aaPredicted RBP7.95□□□□□ -1.14
CCNL1-212ENST00000470121 LINC00208Q96KT6 92 aa7.94□□□□□ -1.14
CCNL1-212ENST00000470121 LIMD2Q9BT23 127 aa7.94□□□□□ -1.14
CCNL1-212ENST00000470121 C8orf87E5RJ46 101 aa7.93□□□□□ -1.14
CCNL1-212ENST00000470121 PRR26Q8N8Z3 221 aa7.93□□□□□ -1.14
CCNL1-212ENST00000470121 TRAV22A0A0B4J277 110 aa7.92□□□□□ -1.14
CCNL1-212ENST00000470121 SPINK1P00995 79 aa7.92□□□□□ -1.14
CCNL1-212ENST00000470121 SERP1Q9Y6X1 66 aa7.92□□□□□ -1.14
CCNL1-212ENST00000470121 C4orf48Q5BLP8 95 aa7.91□□□□□ -1.14
CCNL1-212ENST00000470121 PKHD1L1Q86WI1 4243 aa7.9□□□□□ -1.15
CCNL1-212ENST00000470121 LCE2DQ5TA82 110 aaPredicted RBP7.89□□□□□ -1.15
CCNL1-212ENST00000470121 C1orf64Q8NEQ6 169 aa7.89□□□□□ -1.15
CCNL1-212ENST00000470121 RPS29P62273 56 aaKnown RBP7.88□□□□□ -1.15
CCNL1-212ENST00000470121 NDUFS5O43920 106 aa7.87□□□□□ -1.15
CCNL1-212ENST00000470121 LINC00313P59037 77 aa7.87□□□□□ -1.15
CCNL1-212ENST00000470121 LINC00304Q8N9R0 145 aa7.87□□□□□ -1.15
CCNL1-212ENST00000470121 SPAG11AQ6PDA7 123 aa7.87□□□□□ -1.15
CCNL1-212ENST00000470121 KRTAP16-1A8MUX0 517 aa7.84□□□□□ -1.15
CCNL1-212ENST00000470121 KRTAP13-3Q3SY46 172 aa7.84□□□□□ -1.15
CCNL1-212ENST00000470121 Q8N9P0 234 aaPredicted RBP7.83□□□□□ -1.16
CCNL1-212ENST00000470121 RYR3Q15413 4870 aa7.83□□□□□ -1.16
CCNL1-212ENST00000470121 Q5W150 140 aa7.83□□□□□ -1.16
CCNL1-212ENST00000470121 CYP4F30PQ9H0H9 118 aa7.83□□□□□ -1.16
CCNL1-212ENST00000470121 SPANXA2-OT1Q8N9U9 137 aa7.81□□□□□ -1.16
CCNL1-212ENST00000470121 HSPG2P98160 4391 aa7.81□□□□□ -1.16
CCNL1-212ENST00000470121 FAM229AH3BQW9 127 aa7.78□□□□□ -1.16
CCNL1-212ENST00000470121 PRR4Q16378 134 aa7.76□□□□□ -1.17
CCNL1-212ENST00000470121 IGLV7-46A0A075B6I9 117 aa7.75□□□□□ -1.17
CCNL1-212ENST00000470121 SMIM26A0A096LP01 95 aa7.75□□□□□ -1.17
CCNL1-212ENST00000470121 LOC101927531A0A1B0GV80 90 aa7.74□□□□□ -1.17
CCNL1-212ENST00000470121 PCOTHQ58A44 107 aa7.73□□□□□ -1.17
CCNL1-212ENST00000470121 Q5VSD8 79 aa7.72□□□□□ -1.17
CCNL1-212ENST00000470121 KRTAP17-1Q9BYP8 105 aa7.72□□□□□ -1.17
CCNL1-212ENST00000470121 FP248Q71RG6 208 aaPredicted RBP7.72□□□□□ -1.17
CCNL1-212ENST00000470121 RYR1P21817 5038 aa7.7□□□□□ -1.18
CCNL1-212ENST00000470121 TNXBP22105 4242 aa7.7□□□□□ -1.18
CCNL1-212ENST00000470121 KRTAP10-8P60410 259 aa7.7□□□□□ -1.18
CCNL1-212ENST00000470121 SVIPQ8NHG7 77 aa7.7□□□□□ -1.18
CCNL1-212ENST00000470121 Q8N1X5 172 aa7.66□□□□□ -1.18
CCNL1-212ENST00000470121 RETNLBQ9BQ08 111 aa7.66□□□□□ -1.18
CCNL1-212ENST00000470121 IGKV2-30P06310 120 aa7.66□□□□□ -1.18
CCNL1-212ENST00000470121 LRP1Q07954 4544 aaKnown RBP7.66□□□□□ -1.18
CCNL1-212ENST00000470121 C4orf26Q17RF5 130 aa7.65□□□□□ -1.18
CCNL1-212ENST00000470121 FAT3Q8TDW7 4589 aa7.63□□□□□ -1.19
CCNL1-212ENST00000470121 FLG2Q5D862 2391 aaPredicted RBP7.62□□□□□ -1.19
CCNL1-212ENST00000470121 A8MUU9 505 aa7.6□□□□□ -1.19
CCNL1-212ENST00000470121 C20orf166-AS1Q96NR2 134 aa7.6□□□□□ -1.19
CCNL1-212ENST00000470121 HRES1P13985 223 aa7.59□□□□□ -1.19
CCNL1-212ENST00000470121 C9orf92A6NGG3 77 aa7.58□□□□□ -1.2
CCNL1-212ENST00000470121 COA5Q86WW8 74 aa7.58□□□□□ -1.2
CCNL1-212ENST00000470121 KIAA1109Q2LD37 5005 aa7.56□□□□□ -1.2
CCNL1-212ENST00000470121 Q1T7F1 81 aa7.56□□□□□ -1.2
CCNL1-212ENST00000470121 MPLKIPQ8TAP9 179 aa7.56□□□□□ -1.2
CCNL1-212ENST00000470121 EPPK1P58107 5090 aaKnown RBP7.53□□□□□ -1.2
CCNL1-212ENST00000470121 IGKV2D-30A0A075B6S6 120 aa7.53□□□□□ -1.2
CCNL1-212ENST00000470121 MT1HL1P0DM35 61 aa7.53□□□□□ -1.2
CCNL1-212ENST00000470121 KRTAP3-3Q9BYR6 98 aa7.53□□□□□ -1.2
CCNL1-212ENST00000470121 KRTAP3-2Q9BYR7 98 aa7.53□□□□□ -1.2
CCNL1-212ENST00000470121 DMAC1Q96GE9 116 aa7.51□□□□□ -1.21
CCNL1-212ENST00000470121 ACYP2P14621 99 aa7.49□□□□□ -1.21
CCNL1-212ENST00000470121 C7orf65Q6ZTY9 151 aa7.48□□□□□ -1.21
CCNL1-212ENST00000470121 Q75L30 129 aa7.47□□□□□ -1.21
CCNL1-212ENST00000470121 V9GYY9 64 aa7.46□□□□□ -1.22
CCNL1-212ENST00000470121 MYCBP2O75592 4640 aa7.43□□□□□ -1.22
CCNL1-212ENST00000470121 DMBT1Q9UGM3 2413 aaPredicted RBP7.42□□□□□ -1.22
CCNL1-212ENST00000470121 KRTAP4-5Q9BYR2 181 aa7.39□□□□□ -1.23
CCNL1-212ENST00000470121 PSPHP1O15172 72 aa7.38□□□□□ -1.23
CCNL1-212ENST00000470121 A8MUN3 132 aa7.38□□□□□ -1.23
CCNL1-212ENST00000470121 LINC01558Q9Y6Z2 57 aa7.38□□□□□ -1.23
CCNL1-212ENST00000470121 SPINK7P58062 85 aa7.36□□□□□ -1.23
CCNL1-212ENST00000470121 RPL37P61927 97 aaKnown RBP7.35□□□□□ -1.23
CCNL1-212ENST00000470121 XP32Q5T750 250 aa7.35□□□□□ -1.23
CCNL1-212ENST00000470121 Q5VV11 94 aa7.35□□□□□ -1.23
CCNL1-212ENST00000470121 CHKB-CPT1BH3BT56 60 aa7.33□□□□□ -1.24
CCNL1-212ENST00000470121 PRR15LQ9BU68 103 aa7.32□□□□□ -1.24
CCNL1-212ENST00000470121 ATP11AUNQ6ZP68 121 aa7.31□□□□□ -1.24
CCNL1-212ENST00000470121 KRTAP3-1Q9BYR8 98 aa7.31□□□□□ -1.24
CCNL1-212ENST00000470121 BRK1Q8WUW1 75 aa7.24□□□□□ -1.25
CCNL1-212ENST00000470121 TPRXLQ17RH7 258 aa7.24□□□□□ -1.25
CCNL1-212ENST00000470121 PRO0628Q9UI54 55 aa7.23□□□□□ -1.25
CCNL1-212ENST00000470121 COX6B2Q6YFQ2 88 aa7.22□□□□□ -1.25
CCNL1-212ENST00000470121 BIRC6Q9NR09 4857 aa7.22□□□□□ -1.25
CCNL1-212ENST00000470121 HERC2O95714 4834 aa7.17□□□□□ -1.26
CCNL1-212ENST00000470121 ABCA13Q86UQ4 5058 aa7.15□□□□□ -1.27
CCNL1-212ENST00000470121 A0A1B0GU69 56 aa7.13□□□□□ -1.27
CCNL1-212ENST00000470121 J3QL48 77 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms