RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 Q6ZQT0 140 aa6.89□□□□□ -1.31
HDAC6-217ENST00000469223 Q8NBF4 154 aa6.88□□□□□ -1.31
HDAC6-217ENST00000469223 C9orf153Q5TBE3 101 aa6.87□□□□□ -1.31
HDAC6-217ENST00000469223 SMIM29Q86T20 159 aa6.87□□□□□ -1.31
HDAC6-217ENST00000469223 UBL5Q9BZL1 73 aa6.87□□□□□ -1.31
HDAC6-217ENST00000469223 IGLV9-49A0A0B4J1Y8 123 aa6.84□□□□□ -1.31
HDAC6-217ENST00000469223 SPINK1P00995 79 aa6.82□□□□□ -1.32
HDAC6-217ENST00000469223 NEBP20929 6669 aa6.81□□□□□ -1.32
HDAC6-217ENST00000469223 ATP5EP2Q5VTU8 51 aa6.81□□□□□ -1.32
HDAC6-217ENST00000469223 IGFL1Q6UW32 110 aa6.81□□□□□ -1.32
HDAC6-217ENST00000469223 SSBP3-AS1Q7Z2R9 100 aa6.81□□□□□ -1.32
HDAC6-217ENST00000469223 LINC00643Q86TS7 51 aa6.81□□□□□ -1.32
HDAC6-217ENST00000469223 Q6Q795 121 aa6.8□□□□□ -1.32
HDAC6-217ENST00000469223 MOBPQ13875 183 aa6.79□□□□□ -1.32
HDAC6-217ENST00000469223 NREPQ16612 68 aa6.79□□□□□ -1.32
HDAC6-217ENST00000469223 LINC00846Q9NV44 126 aa6.79□□□□□ -1.32
HDAC6-217ENST00000469223 SS18L2Q9UHA2 77 aa6.79□□□□□ -1.32
HDAC6-217ENST00000469223 SIGMAR1Q99720 223 aa6.78□□□□□ -1.32
HDAC6-217ENST00000469223 A0A1W2PNM2 257 aa6.76□□□□□ -1.33
HDAC6-217ENST00000469223 CD164Q04900 197 aa6.76□□□□□ -1.33
HDAC6-217ENST00000469223 TRBV7-7A0A0K0K1E9 115 aa6.75□□□□□ -1.33
HDAC6-217ENST00000469223 RPS29P62273 56 aaKnown RBP6.75□□□□□ -1.33
HDAC6-217ENST00000469223 KRTAP6-3Q3LI67 103 aa6.75□□□□□ -1.33
HDAC6-217ENST00000469223 KRTAP9-8Q9BYQ0 159 aa6.75□□□□□ -1.33
HDAC6-217ENST00000469223 Q6ZVQ6 151 aa6.74□□□□□ -1.33
HDAC6-217ENST00000469223 A0A087WSZ3 146 aa6.73□□□□□ -1.33
HDAC6-217ENST00000469223 C9orf92A6NGG3 77 aa6.73□□□□□ -1.33
HDAC6-217ENST00000469223 LCE2BO14633 110 aa6.73□□□□□ -1.33
HDAC6-217ENST00000469223 CXCL6P80162 114 aa6.73□□□□□ -1.33
HDAC6-217ENST00000469223 IMUPQ9GZP8 106 aa6.73□□□□□ -1.33
HDAC6-217ENST00000469223 BPY2O14599 106 aa6.71□□□□□ -1.34
HDAC6-217ENST00000469223 LIMD2Q9BT23 127 aa6.71□□□□□ -1.34
HDAC6-217ENST00000469223 J3KT08 172 aa6.7□□□□□ -1.34
HDAC6-217ENST00000469223 MUC12Q9UKN1 5478 aa6.7□□□□□ -1.34
HDAC6-217ENST00000469223 HRCT1Q6UXD1 115 aa6.68□□□□□ -1.34
HDAC6-217ENST00000469223 MT-ATP8P03928 68 aa6.67□□□□□ -1.34
HDAC6-217ENST00000469223 A0A0G2JQZ4 141 aa6.66□□□□□ -1.34
HDAC6-217ENST00000469223 HIST1H4AP62805 103 aaKnown RBP6.66□□□□□ -1.34
HDAC6-217ENST00000469223 IGKV3D-7A0A0C4DH55 119 aa6.65□□□□□ -1.34
HDAC6-217ENST00000469223 NDUFB1O75438 58 aa6.65□□□□□ -1.34
HDAC6-217ENST00000469223 SCGB1A1P11684 91 aa6.65□□□□□ -1.34
HDAC6-217ENST00000469223 KRTAP20-1Q3LI63 56 aa6.65□□□□□ -1.34
HDAC6-217ENST00000469223 Q5XG85 94 aa6.64□□□□□ -1.35
HDAC6-217ENST00000469223 MT2AP02795 61 aa6.62□□□□□ -1.35
HDAC6-217ENST00000469223 IGKV4-1P06312 121 aa6.59□□□□□ -1.35
HDAC6-217ENST00000469223 KRTAP19-6Q3LI70 58 aa6.59□□□□□ -1.35
HDAC6-217ENST00000469223 LINC00472Q9H8W2 130 aa6.59□□□□□ -1.35
HDAC6-217ENST00000469223 A8MWP4 228 aa6.58□□□□□ -1.36
HDAC6-217ENST00000469223 MT1FP04733 61 aa6.58□□□□□ -1.36
HDAC6-217ENST00000469223 RPL37P61927 97 aaKnown RBP6.58□□□□□ -1.36
HDAC6-217ENST00000469223 KRTAP9-3Q9BYQ3 159 aa6.56□□□□□ -1.36
HDAC6-217ENST00000469223 FAM236AA0A1B0GUQ0 79 aa6.55□□□□□ -1.36
HDAC6-217ENST00000469223 FAM236BA0A1B0GV22 79 aa6.55□□□□□ -1.36
HDAC6-217ENST00000469223 ATOX1O00244 68 aa6.55□□□□□ -1.36
HDAC6-217ENST00000469223 DSCR10P59022 87 aa6.54□□□□□ -1.36
HDAC6-217ENST00000469223 DEFB116Q30KQ4 102 aa6.54□□□□□ -1.36
HDAC6-217ENST00000469223 PRR15Q8IV56 129 aa6.54□□□□□ -1.36
HDAC6-217ENST00000469223 SMIM20Q8N5G0 67 aa6.54□□□□□ -1.36
HDAC6-217ENST00000469223 K7EQZ3 153 aa6.53□□□□□ -1.36
HDAC6-217ENST00000469223 A0A087WVE0 104 aa6.52□□□□□ -1.37
HDAC6-217ENST00000469223 HCG22E2RYF7 251 aa6.52□□□□□ -1.37
HDAC6-217ENST00000469223 Q96NJ1 140 aa6.52□□□□□ -1.37
HDAC6-217ENST00000469223 A0A1B0GVX0 72 aa6.51□□□□□ -1.37
HDAC6-217ENST00000469223 C8orf87E5RJ46 101 aa6.51□□□□□ -1.37
HDAC6-217ENST00000469223 Q8N9L7 120 aa6.51□□□□□ -1.37
HDAC6-217ENST00000469223 KRTAP10-10P60014 251 aa6.49□□□□□ -1.37
HDAC6-217ENST00000469223 C1orf195Q5TG92 126 aa6.49□□□□□ -1.37
HDAC6-217ENST00000469223 IGHV6-1A0A0B4J1U7 121 aa6.48□□□□□ -1.37
HDAC6-217ENST00000469223 CASC2Q6XLA1 102 aa6.48□□□□□ -1.37
HDAC6-217ENST00000469223 ANAPC13Q9BS18 74 aa6.48□□□□□ -1.37
HDAC6-217ENST00000469223 MDN1Q9NU22 5596 aa6.46□□□□□ -1.38
HDAC6-217ENST00000469223 hDV103S1A0JD37 113 aa6.45□□□□□ -1.38
HDAC6-217ENST00000469223 C8orf17Q9NRJ1 99 aa6.45□□□□□ -1.38
HDAC6-217ENST00000469223 LINC00313P59037 77 aa6.44□□□□□ -1.38
HDAC6-217ENST00000469223 WFDC13Q8IUB5 93 aa6.44□□□□□ -1.38
HDAC6-217ENST00000469223 TMEM254Q8TBM7 123 aa6.43□□□□□ -1.38
HDAC6-217ENST00000469223 MMP24-AS1A0A0U1RRL7 71 aa6.42□□□□□ -1.38
HDAC6-217ENST00000469223 SERP2Q8N6R1 65 aa6.42□□□□□ -1.38
HDAC6-217ENST00000469223 TRAV7A0A075B6U4 112 aa6.41□□□□□ -1.38
HDAC6-217ENST00000469223 PCP4P48539 62 aa6.41□□□□□ -1.38
HDAC6-217ENST00000469223 TP53AIP1Q9HCN2 124 aa6.41□□□□□ -1.38
HDAC6-217ENST00000469223 MRPL34Q9BQ48 92 aaKnown RBP6.4□□□□□ -1.38
HDAC6-217ENST00000469223 NDUFS5O43920 106 aa6.38□□□□□ -1.39
HDAC6-217ENST00000469223 UQCRQO14949 82 aa6.37□□□□□ -1.39
HDAC6-217ENST00000469223 COX7CP15954 63 aa6.37□□□□□ -1.39
HDAC6-217ENST00000469223 MP68P56378 58 aa6.35□□□□□ -1.39
HDAC6-217ENST00000469223 C5orf47Q569G3 176 aa6.35□□□□□ -1.39
HDAC6-217ENST00000469223 OCR1Q9BZK8 76 aa6.34□□□□□ -1.39
HDAC6-217ENST00000469223 KMT2DO14686 5537 aa6.33□□□□□ -1.4
HDAC6-217ENST00000469223 H3BPC8 53 aa6.31□□□□□ -1.4
HDAC6-217ENST00000469223 ATP11AUNQ6ZP68 121 aa6.31□□□□□ -1.4
HDAC6-217ENST00000469223 TRAV22A0A0B4J277 110 aa6.3□□□□□ -1.4
HDAC6-217ENST00000469223 NOTCH2NLQ7Z3S9 236 aa6.29□□□□□ -1.4
HDAC6-217ENST00000469223 Q8N9P0 234 aaPredicted RBP6.29□□□□□ -1.4
HDAC6-217ENST00000469223 C20orf166-AS1Q96NR2 134 aa6.29□□□□□ -1.4
HDAC6-217ENST00000469223 Q75L30 129 aa6.28□□□□□ -1.4
HDAC6-217ENST00000469223 C20orf197Q8N268 126 aa6.27□□□□□ -1.41
HDAC6-217ENST00000469223 H0Y9P7 68 aa6.26□□□□□ -1.41
HDAC6-217ENST00000469223 NDUFC1O43677 76 aa6.26□□□□□ -1.41
HDAC6-217ENST00000469223 KRTAP16-1A8MUX0 517 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms