RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 DEFB4AO15263 64 aa-1.34□□□□□ -2.62
SMC4-205ENST00000465563 IFI6P09912 130 aa-1.34□□□□□ -2.62
SMC4-205ENST00000465563 PLXNC1O60486 1568 aa-1.34□□□□□ -2.62
SMC4-205ENST00000465563 CDC42BPAQ5VT25 1732 aa-1.35□□□□□ -2.62
SMC4-205ENST00000465563 WIZO95785 1651 aa-1.35□□□□□ -2.63
SMC4-205ENST00000465563 TRAV21A0A0B4J279 112 aa-1.35□□□□□ -2.63
SMC4-205ENST00000465563 IAPPP10997 89 aa-1.35□□□□□ -2.63
SMC4-205ENST00000465563 CSMD2Q7Z408 3487 aa-1.35□□□□□ -2.63
SMC4-205ENST00000465563 NWD1Q149M9 1564 aa-1.35□□□□□ -2.63
SMC4-205ENST00000465563 IGLV5-48A0A075B6I7 105 aa-1.37□□□□□ -2.63
SMC4-205ENST00000465563 PPLO60437 1756 aa-1.38□□□□□ -2.63
SMC4-205ENST00000465563 CYB5AP00167 134 aa-1.38□□□□□ -2.63
SMC4-205ENST00000465563 FREM2Q5SZK8 3169 aa-1.38□□□□□ -2.63
SMC4-205ENST00000465563 ZFHX4Q86UP3 3567 aa-1.39□□□□□ -2.63
SMC4-205ENST00000465563 MYMXA0A1B0GTQ4 84 aa-1.39□□□□□ -2.63
SMC4-205ENST00000465563 LYNX1G3V0Z9 82 aa-1.39□□□□□ -2.63
SMC4-205ENST00000465563 KRTAP19-6Q3LI70 58 aa-1.39□□□□□ -2.63
SMC4-205ENST00000465563 PRUNE2Q8WUY3 3088 aa-1.39□□□□□ -2.63
SMC4-205ENST00000465563 MAGI3Q5TCQ9 1506 aa-1.4□□□□□ -2.63
SMC4-205ENST00000465563 LINC01546A6NGU7 62 aa-1.4□□□□□ -2.63
SMC4-205ENST00000465563 PYY3Q5JQD4 70 aa-1.41□□□□□ -2.64
SMC4-205ENST00000465563 ARFGEF2Q9Y6D5 1785 aa-1.42□□□□□ -2.64
SMC4-205ENST00000465563 WT1-ASQ06250 92 aa-1.42□□□□□ -2.64
SMC4-205ENST00000465563 CFAP54Q96N23 3096 aa-1.42□□□□□ -2.64
SMC4-205ENST00000465563 DEPDC5O75140 1603 aa-1.43□□□□□ -2.64
SMC4-205ENST00000465563 SPART-AS1P0CW21 52 aa-1.43□□□□□ -2.64
SMC4-205ENST00000465563 NOP10Q9NPE3 64 aaKnown RBP-1.43□□□□□ -2.64
SMC4-205ENST00000465563 PLIN4Q96Q06 1357 aa-1.44□□□□□ -2.64
SMC4-205ENST00000465563 ABCC3O15438 1527 aa-1.44□□□□□ -2.64
SMC4-205ENST00000465563 ACYP1P07311 99 aa-1.44□□□□□ -2.64
SMC4-205ENST00000465563 RABAC1Q9UI14 185 aa-1.44□□□□□ -2.64
SMC4-205ENST00000465563 A8MTW9 85 aa-1.45□□□□□ -2.64
SMC4-205ENST00000465563 MT1FP04733 61 aa-1.45□□□□□ -2.64
SMC4-205ENST00000465563 RPS29P62273 56 aaKnown RBP-1.45□□□□□ -2.64
SMC4-205ENST00000465563 SNRPFP62306 86 aaKnown RBP-1.45□□□□□ -2.64
SMC4-205ENST00000465563 NCOA2Q15596 1464 aa-1.45□□□□□ -2.64
SMC4-205ENST00000465563 CCNB3Q8WWL7 1395 aa-1.46□□□□□ -2.64
SMC4-205ENST00000465563 DIP2BQ9P265 1576 aa-1.46□□□□□ -2.64
SMC4-205ENST00000465563 LCE6AA0A183 80 aa-1.46□□□□□ -2.64
SMC4-205ENST00000465563 BVES-AS1Q5T3Y7 98 aa-1.46□□□□□ -2.64
SMC4-205ENST00000465563 LINC00643Q86TS7 51 aa-1.46□□□□□ -2.64
SMC4-205ENST00000465563 TTC37Q6PGP7 1564 aa-1.47□□□□□ -2.64
SMC4-205ENST00000465563 ANKRD36CQ5JPF3 1778 aa-1.47□□□□□ -2.64
SMC4-205ENST00000465563 KIF14Q15058 1648 aa-1.47□□□□□ -2.64
SMC4-205ENST00000465563 MAP3K4Q9Y6R4 1608 aa-1.47□□□□□ -2.64
SMC4-205ENST00000465563 H3BUA1 57 aa-1.47□□□□□ -2.64
SMC4-205ENST00000465563 TOGARAM1Q9Y4F4 1720 aa-1.47□□□□□ -2.64
SMC4-205ENST00000465563 CEBPZOSA8MTT3 80 aa-1.48□□□□□ -2.65
SMC4-205ENST00000465563 M0QZ58 72 aa-1.48□□□□□ -2.65
SMC4-205ENST00000465563 NDUFB1O75438 58 aa-1.48□□□□□ -2.65
SMC4-205ENST00000465563 S100A16Q96FQ6 103 aaKnown RBP-1.48□□□□□ -2.65
SMC4-205ENST00000465563 CRYBG3Q68DQ2 2970 aa-1.48□□□□□ -2.65
SMC4-205ENST00000465563 URB2Q14146 1524 aaKnown RBP-1.49□□□□□ -2.65
SMC4-205ENST00000465563 MAST1Q9Y2H9 1570 aa-1.49□□□□□ -2.65
SMC4-205ENST00000465563 IFI27P40305 119 aaPredicted RBP-1.49□□□□□ -2.65
SMC4-205ENST00000465563 DDX60LQ5H9U9 1706 aaKnown RBP-1.49□□□□□ -2.65
SMC4-205ENST00000465563 PIK3C2BO00750 1634 aa-1.5□□□□□ -2.65
SMC4-205ENST00000465563 M0QY20 66 aa-1.5□□□□□ -2.65
SMC4-205ENST00000465563 MYO15AQ9UKN7 3530 aa-1.5□□□□□ -2.65
SMC4-205ENST00000465563 WDFY3Q8IZQ1 3526 aa-1.51□□□□□ -2.65
SMC4-205ENST00000465563 RPS27P42677 84 aaKnown RBP-1.51□□□□□ -2.65
SMC4-205ENST00000465563 DEFB136Q30KP8 78 aa-1.51□□□□□ -2.65
SMC4-205ENST00000465563 MINOS1Q5TGZ0 78 aa-1.51□□□□□ -2.65
SMC4-205ENST00000465563 RPS27LQ71UM5 84 aaKnown RBP-1.51□□□□□ -2.65
SMC4-205ENST00000465563 SFTA3P0C7M3 94 aa-1.52□□□□□ -2.65
SMC4-205ENST00000465563 V9GYS6 101 aa-1.52□□□□□ -2.65
SMC4-205ENST00000465563 PARP4Q9UKK3 1724 aaKnown RBP-1.52□□□□□ -2.65
SMC4-205ENST00000465563 SPEGQ15772 3267 aa-1.53□□□□□ -2.65
SMC4-205ENST00000465563 DEFB131BA0A096LNP1 70 aa-1.53□□□□□ -2.65
SMC4-205ENST00000465563 PVALEFA0A1B0GWK0 134 aa-1.53□□□□□ -2.65
SMC4-205ENST00000465563 NDUFA4O00483 81 aa-1.53□□□□□ -2.65
SMC4-205ENST00000465563 LY75O60449 1722 aa-1.53□□□□□ -2.65
SMC4-205ENST00000465563 MRPL33O75394 65 aaKnown RBP-1.53□□□□□ -2.65
SMC4-205ENST00000465563 DMDP11532 3685 aa-1.53□□□□□ -2.65
SMC4-205ENST00000465563 PLCH1Q4KWH8 1693 aa-1.53□□□□□ -2.65
SMC4-205ENST00000465563 Q9H521 79 aa-1.53□□□□□ -2.65
SMC4-205ENST00000465563 CENPEQ02224 2701 aa-1.53□□□□□ -2.66
SMC4-205ENST00000465563 CCDC88BA6NC98 1476 aa-1.54□□□□□ -2.66
SMC4-205ENST00000465563 UMAD1C9J7I0 102 aa-1.54□□□□□ -2.66
SMC4-205ENST00000465563 FCER1GP30273 86 aa-1.54□□□□□ -2.66
SMC4-205ENST00000465563 CRIP1P50238 77 aa-1.55□□□□□ -2.66
SMC4-205ENST00000465563 VPS13CQ709C8 3753 aa-1.55□□□□□ -2.66
SMC4-205ENST00000465563 KIAA0586Q9BVV6 1533 aa-1.56□□□□□ -2.66
SMC4-205ENST00000465563 TDRG1Q3Y452 100 aa-1.56□□□□□ -2.66
SMC4-205ENST00000465563 LEAP2Q969E1 77 aa-1.56□□□□□ -2.66
SMC4-205ENST00000465563 C6orf48Q9UBA6 75 aa-1.56□□□□□ -2.66
SMC4-205ENST00000465563 SMARCA2P51531 1590 aa-1.56□□□□□ -2.66
SMC4-205ENST00000465563 NCBP2-AS2Q69YL0 99 aa-1.57□□□□□ -2.66
SMC4-205ENST00000465563 CEP350Q5VT06 3117 aa-1.57□□□□□ -2.66
SMC4-205ENST00000465563 ITSN1Q15811 1721 aa-1.58□□□□□ -2.66
SMC4-205ENST00000465563 ERVK-7P63135 1459 aa-1.58□□□□□ -2.66
SMC4-205ENST00000465563 KIF1AQ12756 1690 aa-1.58□□□□□ -2.66
SMC4-205ENST00000465563 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.59□□□□□ -2.66
SMC4-205ENST00000465563 TJP1Q07157 1748 aa-1.59□□□□□ -2.66
SMC4-205ENST00000465563 CFAP43Q8NDM7 1665 aa-1.59□□□□□ -2.66
SMC4-205ENST00000465563 ITSN2Q9NZM3 1697 aa-1.59□□□□□ -2.66
SMC4-205ENST00000465563 FRYLO94915 3013 aa-1.59□□□□□ -2.66
SMC4-205ENST00000465563 ZC3H13Q5T200 1668 aaKnown RBP-1.6□□□□□ -2.67
SMC4-205ENST00000465563 UBL5Q9BZL1 73 aa-1.6□□□□□ -2.67
SMC4-205ENST00000465563 NREPQ16612 68 aa-1.61□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms