RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 PTPN23Q9H3S7 1636 aa-0.32□□□□□ -2.46
TM9SF3-203ENST00000464654 CEP162Q5TB80 1403 aa-0.32□□□□□ -2.46
TM9SF3-203ENST00000464654 PLIN4Q96Q06 1357 aa-0.32□□□□□ -2.46
TM9SF3-203ENST00000464654 ALKQ9UM73 1620 aa-0.33□□□□□ -2.46
TM9SF3-203ENST00000464654 H3BNG1 76 aa-0.33□□□□□ -2.46
TM9SF3-203ENST00000464654 C3orf79P0CE67 100 aa-0.33□□□□□ -2.46
TM9SF3-203ENST00000464654 LINC00158P58513 81 aa-0.33□□□□□ -2.46
TM9SF3-203ENST00000464654 DEFB136Q30KP8 78 aa-0.33□□□□□ -2.46
TM9SF3-203ENST00000464654 LINC00643Q86TS7 51 aa-0.33□□□□□ -2.46
TM9SF3-203ENST00000464654 DEFB104AQ8WTQ1 72 aa-0.33□□□□□ -2.46
TM9SF3-203ENST00000464654 PRO3102Q9H379 93 aa-0.33□□□□□ -2.46
TM9SF3-203ENST00000464654 ANKRD50Q9ULJ7 1429 aa-0.33□□□□□ -2.46
TM9SF3-203ENST00000464654 BRCA2P51587 3418 aa-0.33□□□□□ -2.46
TM9SF3-203ENST00000464654 VPS13AQ96RL7 3174 aa-0.33□□□□□ -2.46
TM9SF3-203ENST00000464654 CCNB3Q8WWL7 1395 aa-0.33□□□□□ -2.46
TM9SF3-203ENST00000464654 MED14O60244 1454 aa-0.34□□□□□ -2.46
TM9SF3-203ENST00000464654 PVALEFA0A1B0GWK0 134 aa-0.34□□□□□ -2.46
TM9SF3-203ENST00000464654 DEFB4AO15263 64 aa-0.34□□□□□ -2.46
TM9SF3-203ENST00000464654 ACYP1P07311 99 aa-0.34□□□□□ -2.46
TM9SF3-203ENST00000464654 RABAC1Q9UI14 185 aa-0.34□□□□□ -2.46
TM9SF3-203ENST00000464654 S4R3F8 94 aa-0.34□□□□□ -2.46
TM9SF3-203ENST00000464654 KIF20BQ96Q89 1820 aa-0.34□□□□□ -2.46
TM9SF3-203ENST00000464654 MAP3K1Q13233 1512 aa-0.34□□□□□ -2.46
TM9SF3-203ENST00000464654 MYO3AQ8NEV4 1616 aa-0.35□□□□□ -2.46
TM9SF3-203ENST00000464654 QSER1Q2KHR3 1735 aa-0.35□□□□□ -2.47
TM9SF3-203ENST00000464654 CDC42BPAQ5VT25 1732 aa-0.35□□□□□ -2.47
TM9SF3-203ENST00000464654 UBR1Q8IWV7 1749 aa-0.35□□□□□ -2.47
TM9SF3-203ENST00000464654 PLXNC1O60486 1568 aa-0.35□□□□□ -2.47
TM9SF3-203ENST00000464654 IFI27P40305 119 aaPredicted RBP-0.35□□□□□ -2.47
TM9SF3-203ENST00000464654 DEFB110Q30KQ9 67 aa-0.35□□□□□ -2.47
TM9SF3-203ENST00000464654 PREX1Q8TCU6 1659 aa-0.35□□□□□ -2.47
TM9SF3-203ENST00000464654 SPTBN5Q9NRC6 3674 aaKnown RBP-0.35□□□□□ -2.47
TM9SF3-203ENST00000464654 VPS13CQ709C8 3753 aa-0.35□□□□□ -2.47
TM9SF3-203ENST00000464654 PKD1L3Q7Z443 1732 aa-0.35□□□□□ -2.47
TM9SF3-203ENST00000464654 EEA1Q15075 1411 aa-0.36□□□□□ -2.47
TM9SF3-203ENST00000464654 XIRP2A4UGR9 3374 aa-0.36□□□□□ -2.47
TM9SF3-203ENST00000464654 KANTRA0A1W2PQU2 76 aa-0.36□□□□□ -2.47
TM9SF3-203ENST00000464654 LINC01546A6NGU7 62 aa-0.36□□□□□ -2.47
TM9SF3-203ENST00000464654 UMAD1C9J7I0 102 aa-0.36□□□□□ -2.47
TM9SF3-203ENST00000464654 TNP1P09430 55 aa-0.36□□□□□ -2.47
TM9SF3-203ENST00000464654 UTRNP46939 3433 aa-0.36□□□□□ -2.47
TM9SF3-203ENST00000464654 ERVK-7P63135 1459 aa-0.36□□□□□ -2.47
TM9SF3-203ENST00000464654 ASPMQ8IZT6 3477 aa-0.36□□□□□ -2.47
TM9SF3-203ENST00000464654 BCORQ6W2J9 1755 aa-0.37□□□□□ -2.47
TM9SF3-203ENST00000464654 URB2Q14146 1524 aaKnown RBP-0.37□□□□□ -2.47
TM9SF3-203ENST00000464654 MMP24-AS1A0A0U1RRL7 71 aa-0.37□□□□□ -2.47
TM9SF3-203ENST00000464654 NCOA2Q15596 1464 aa-0.37□□□□□ -2.47
TM9SF3-203ENST00000464654 GOLGB1Q14789 3259 aaKnown RBP-0.37□□□□□ -2.47
TM9SF3-203ENST00000464654 PIK3C2BO00750 1634 aa-0.38□□□□□ -2.47
TM9SF3-203ENST00000464654 USP32Q8NFA0 1604 aa-0.38□□□□□ -2.47
TM9SF3-203ENST00000464654 TIAM2Q8IVF5 1701 aa-0.38□□□□□ -2.47
TM9SF3-203ENST00000464654 LYNX1G3V0Z9 82 aa-0.38□□□□□ -2.47
TM9SF3-203ENST00000464654 M0QZ58 72 aa-0.38□□□□□ -2.47
TM9SF3-203ENST00000464654 IFI6P09912 130 aa-0.38□□□□□ -2.47
TM9SF3-203ENST00000464654 PRLHP81277 87 aa-0.38□□□□□ -2.47
TM9SF3-203ENST00000464654 DNMBPQ6XZF7 1577 aa-0.38□□□□□ -2.47
TM9SF3-203ENST00000464654 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.38□□□□□ -2.47
TM9SF3-203ENST00000464654 ZNF831Q5JPB2 1677 aa-0.38□□□□□ -2.47
TM9SF3-203ENST00000464654 RGPD8O14715 1765 aaPredicted RBP-0.38□□□□□ -2.47
TM9SF3-203ENST00000464654 RGPD2P0DJD1 1756 aa-0.38□□□□□ -2.47
TM9SF3-203ENST00000464654 RGPD5Q99666 1765 aa-0.38□□□□□ -2.47
TM9SF3-203ENST00000464654 RGPD1P0DJD0 1748 aa-0.38□□□□□ -2.47
TM9SF3-203ENST00000464654 UBR3Q6ZT12 1888 aa-0.39□□□□□ -2.47
TM9SF3-203ENST00000464654 THOC2Q8NI27 1593 aaKnown RBP-0.39□□□□□ -2.47
TM9SF3-203ENST00000464654 CD163L1Q9NR16 1453 aa-0.39□□□□□ -2.47
TM9SF3-203ENST00000464654 A8MTW9 85 aa-0.39□□□□□ -2.47
TM9SF3-203ENST00000464654 ATP5EP2Q5VTU8 51 aa-0.39□□□□□ -2.47
TM9SF3-203ENST00000464654 LEAP2Q969E1 77 aa-0.39□□□□□ -2.47
TM9SF3-203ENST00000464654 TTTY10Q9BZA0 68 aa-0.39□□□□□ -2.47
TM9SF3-203ENST00000464654 RNF17Q9BXT8 1623 aaKnown RBP-0.39□□□□□ -2.47
TM9SF3-203ENST00000464654 ABCC3O15438 1527 aa-0.39□□□□□ -2.47
TM9SF3-203ENST00000464654 UACAQ9BZF9 1416 aa-0.39□□□□□ -2.47
TM9SF3-203ENST00000464654 RGPD4Q7Z3J3 1758 aa-0.4□□□□□ -2.47
TM9SF3-203ENST00000464654 POLR1AO95602 1720 aaPredicted RBP-0.4□□□□□ -2.47
TM9SF3-203ENST00000464654 A0A087WXM4 84 aa-0.4□□□□□ -2.47
TM9SF3-203ENST00000464654 NDUFA4O00483 81 aa-0.4□□□□□ -2.47
TM9SF3-203ENST00000464654 SPART-AS1P0CW21 52 aa-0.4□□□□□ -2.47
TM9SF3-203ENST00000464654 CD52P31358 61 aa-0.4□□□□□ -2.47
TM9SF3-203ENST00000464654 TDRG1Q3Y452 100 aa-0.4□□□□□ -2.47
TM9SF3-203ENST00000464654 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.4□□□□□ -2.47
TM9SF3-203ENST00000464654 CLASP1Q7Z460 1538 aa-0.4□□□□□ -2.47
TM9SF3-203ENST00000464654 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.4□□□□□ -2.47
TM9SF3-203ENST00000464654 ZC3H13Q5T200 1668 aaKnown RBP-0.4□□□□□ -2.47
TM9SF3-203ENST00000464654 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.4□□□□□ -2.47
TM9SF3-203ENST00000464654 NWD1Q149M9 1564 aa-0.4□□□□□ -2.47
TM9SF3-203ENST00000464654 TTC37Q6PGP7 1564 aa-0.4□□□□□ -2.47
TM9SF3-203ENST00000464654 MAST1Q9Y2H9 1570 aa-0.4□□□□□ -2.47
TM9SF3-203ENST00000464654 ARHGAP35Q9NRY4 1499 aa-0.41□□□□□ -2.47
TM9SF3-203ENST00000464654 NRXN3Q9Y4C0 1643 aa-0.41□□□□□ -2.47
TM9SF3-203ENST00000464654 IGLV5-48A0A075B6I7 105 aa-0.41□□□□□ -2.48
TM9SF3-203ENST00000464654 DEFB130BP0DP73 79 aa-0.41□□□□□ -2.48
TM9SF3-203ENST00000464654 DEFB130AP0DP74 79 aa-0.41□□□□□ -2.48
TM9SF3-203ENST00000464654 IAPPP10997 89 aa-0.41□□□□□ -2.48
TM9SF3-203ENST00000464654 ADIRFQ15847 76 aa-0.41□□□□□ -2.48
TM9SF3-203ENST00000464654 NREPQ16612 68 aa-0.41□□□□□ -2.48
TM9SF3-203ENST00000464654 NOP10Q9NPE3 64 aaKnown RBP-0.41□□□□□ -2.48
TM9SF3-203ENST00000464654 CCDC88BA6NC98 1476 aa-0.41□□□□□ -2.48
TM9SF3-203ENST00000464654 TMEM131LA2VDJ0 1609 aa-0.42□□□□□ -2.48
TM9SF3-203ENST00000464654 RGPD3A6NKT7 1758 aaPredicted RBP-0.42□□□□□ -2.48
TM9SF3-203ENST00000464654 CROCC2H7BZ55 1655 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms