RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 SYNE2Q8WXH0 6885 aaKnown RBP7.39□□□□□ -1.23
DNMT3A-207ENST00000461228 hADV29S1A0JD25 119 aa7.38□□□□□ -1.23
DNMT3A-207ENST00000461228 LST1O00453 97 aa7.38□□□□□ -1.23
DNMT3A-207ENST00000461228 TRIAP1O43715 76 aa7.37□□□□□ -1.23
DNMT3A-207ENST00000461228 MT2AP02795 61 aa7.37□□□□□ -1.23
DNMT3A-207ENST00000461228 Q96NJ1 140 aa7.36□□□□□ -1.23
DNMT3A-207ENST00000461228 SNCGO76070 127 aa7.35□□□□□ -1.23
DNMT3A-207ENST00000461228 FAM240AA0A1B0GVK7 77 aa7.33□□□□□ -1.24
DNMT3A-207ENST00000461228 KRTAP19-1Q8IUB9 90 aa7.32□□□□□ -1.24
DNMT3A-207ENST00000461228 LCE2BO14633 110 aa7.31□□□□□ -1.24
DNMT3A-207ENST00000461228 MPLKIPQ8TAP9 179 aa7.31□□□□□ -1.24
DNMT3A-207ENST00000461228 MT1FP04733 61 aa7.3□□□□□ -1.24
DNMT3A-207ENST00000461228 ACYP1P07311 99 aa7.3□□□□□ -1.24
DNMT3A-207ENST00000461228 KRTAP9-3Q9BYQ3 159 aa7.3□□□□□ -1.24
DNMT3A-207ENST00000461228 TRACP01848 142 aa7.29□□□□□ -1.24
DNMT3A-207ENST00000461228 MT-ATP8P03928 68 aa7.29□□□□□ -1.24
DNMT3A-207ENST00000461228 ANAPC13Q9BS18 74 aa7.27□□□□□ -1.25
DNMT3A-207ENST00000461228 LINC00846Q9NV44 126 aa7.25□□□□□ -1.25
DNMT3A-207ENST00000461228 DNAL4O96015 105 aa7.24□□□□□ -1.25
DNMT3A-207ENST00000461228 RBM12B-AS1Q9P1G2 102 aa7.24□□□□□ -1.25
DNMT3A-207ENST00000461228 A0A087WSZ3 146 aa7.22□□□□□ -1.25
DNMT3A-207ENST00000461228 FAM236DA0A1B0GTK5 79 aa7.22□□□□□ -1.25
DNMT3A-207ENST00000461228 H0YGX0 51 aa7.22□□□□□ -1.25
DNMT3A-207ENST00000461228 FAM236CP0DP71 79 aa7.22□□□□□ -1.25
DNMT3A-207ENST00000461228 HRES1P13985 223 aa7.22□□□□□ -1.25
DNMT3A-207ENST00000461228 GHRHP01286 108 aa7.21□□□□□ -1.26
DNMT3A-207ENST00000461228 KRTAP19-6Q3LI70 58 aa7.21□□□□□ -1.26
DNMT3A-207ENST00000461228 IMUPQ9GZP8 106 aa7.21□□□□□ -1.26
DNMT3A-207ENST00000461228 KRTAP16-1A8MUX0 517 aa7.2□□□□□ -1.26
DNMT3A-207ENST00000461228 KRTAP10-10P60014 251 aa7.2□□□□□ -1.26
DNMT3A-207ENST00000461228 NDUFV3P56181 108 aaKnown RBP7.19□□□□□ -1.26
DNMT3A-207ENST00000461228 BAALC-AS2P0C853 105 aa7.18□□□□□ -1.26
DNMT3A-207ENST00000461228 LINC00643Q86TS7 51 aa7.18□□□□□ -1.26
DNMT3A-207ENST00000461228 A0A1B0GX51 115 aa7.17□□□□□ -1.26
DNMT3A-207ENST00000461228 DSCR10P59022 87 aa7.17□□□□□ -1.26
DNMT3A-207ENST00000461228 LINC00313P59037 77 aa7.16□□□□□ -1.26
DNMT3A-207ENST00000461228 NOTCH2NLQ7Z3S9 236 aa7.13□□□□□ -1.27
DNMT3A-207ENST00000461228 TRBV7-4A0A0J9YYF1 115 aa7.12□□□□□ -1.27
DNMT3A-207ENST00000461228 ORMDL1Q9P0S3 153 aa7.11□□□□□ -1.27
DNMT3A-207ENST00000461228 H3BQ85 93 aa7.1□□□□□ -1.27
DNMT3A-207ENST00000461228 FAM218AQ96MZ4 157 aa7.1□□□□□ -1.27
DNMT3A-207ENST00000461228 A0A1W2PNM2 257 aa7.09□□□□□ -1.27
DNMT3A-207ENST00000461228 JMJD7-PLA2G4BH0Y9G9 81 aa7.09□□□□□ -1.27
DNMT3A-207ENST00000461228 IGKV4-1P06312 121 aa7.08□□□□□ -1.28
DNMT3A-207ENST00000461228 A8MWP4 228 aa7.07□□□□□ -1.28
DNMT3A-207ENST00000461228 ATP5EP2Q5VTU8 51 aa7.07□□□□□ -1.28
DNMT3A-207ENST00000461228 FAM236AA0A1B0GUQ0 79 aa7.06□□□□□ -1.28
DNMT3A-207ENST00000461228 FAM236BA0A1B0GV22 79 aa7.06□□□□□ -1.28
DNMT3A-207ENST00000461228 TMEM256-PLSCR3K7ERE1 68 aa7.06□□□□□ -1.28
DNMT3A-207ENST00000461228 KRTAP6-3Q3LI67 103 aa7.06□□□□□ -1.28
DNMT3A-207ENST00000461228 LINC00472Q9H8W2 130 aa7.06□□□□□ -1.28
DNMT3A-207ENST00000461228 C8orf87E5RJ46 101 aa7.05□□□□□ -1.28
DNMT3A-207ENST00000461228 ATOX1O00244 68 aa7.05□□□□□ -1.28
DNMT3A-207ENST00000461228 NEBP20929 6669 aa7.03□□□□□ -1.28
DNMT3A-207ENST00000461228 C14orf132Q9NPU4 83 aa7.02□□□□□ -1.29
DNMT3A-207ENST00000461228 CCDC179H3BU77 68 aa7.01□□□□□ -1.29
DNMT3A-207ENST00000461228 UQCRQO14949 82 aa7.01□□□□□ -1.29
DNMT3A-207ENST00000461228 ZCCHC13Q8WW36 166 aaKnown RBP7.01□□□□□ -1.29
DNMT3A-207ENST00000461228 CCKP06307 115 aa7□□□□□ -1.29
DNMT3A-207ENST00000461228 A0A1B0GVX0 72 aa6.99□□□□□ -1.29
DNMT3A-207ENST00000461228 PDE6GP18545 87 aa6.99□□□□□ -1.29
DNMT3A-207ENST00000461228 IGHV6-1A0A0B4J1U7 121 aa6.98□□□□□ -1.29
DNMT3A-207ENST00000461228 UBL5Q9BZL1 73 aa6.98□□□□□ -1.29
DNMT3A-207ENST00000461228 COX7CP15954 63 aa6.96□□□□□ -1.3
DNMT3A-207ENST00000461228 SPINK7P58062 85 aa6.96□□□□□ -1.3
DNMT3A-207ENST00000461228 HIST1H4AP62805 103 aaKnown RBP6.96□□□□□ -1.3
DNMT3A-207ENST00000461228 LOC110117498A0A087WWA1 95 aa6.94□□□□□ -1.3
DNMT3A-207ENST00000461228 J3KT08 172 aa6.94□□□□□ -1.3
DNMT3A-207ENST00000461228 Q8N9P0 234 aaPredicted RBP6.94□□□□□ -1.3
DNMT3A-207ENST00000461228 RBM3P98179 157 aaKnown RBP6.93□□□□□ -1.3
DNMT3A-207ENST00000461228 DSCR8Q96T75 97 aa6.93□□□□□ -1.3
DNMT3A-207ENST00000461228 MUC12Q9UKN1 5478 aa6.92□□□□□ -1.3
DNMT3A-207ENST00000461228 IGKV3D-7A0A0C4DH55 119 aa6.92□□□□□ -1.3
DNMT3A-207ENST00000461228 WFDC13Q8IUB5 93 aa6.91□□□□□ -1.3
DNMT3A-207ENST00000461228 SERP2Q8N6R1 65 aa6.91□□□□□ -1.3
DNMT3A-207ENST00000461228 DEFB116Q30KQ4 102 aa6.9□□□□□ -1.3
DNMT3A-207ENST00000461228 SMIM20Q8N5G0 67 aa6.89□□□□□ -1.31
DNMT3A-207ENST00000461228 Q6ZQT0 140 aa6.88□□□□□ -1.31
DNMT3A-207ENST00000461228 TMEM258P61165 79 aa6.87□□□□□ -1.31
DNMT3A-207ENST00000461228 CXCL6P80162 114 aa6.85□□□□□ -1.31
DNMT3A-207ENST00000461228 SVIPQ8NHG7 77 aa6.84□□□□□ -1.31
DNMT3A-207ENST00000461228 A0A1B0GW54 56 aa6.82□□□□□ -1.32
DNMT3A-207ENST00000461228 NDUFB1O75438 58 aa6.82□□□□□ -1.32
DNMT3A-207ENST00000461228 A0A087WVE0 104 aa6.81□□□□□ -1.32
DNMT3A-207ENST00000461228 Q6ZVQ6 151 aa6.8□□□□□ -1.32
DNMT3A-207ENST00000461228 TRAV7A0A075B6U4 112 aa6.79□□□□□ -1.32
DNMT3A-207ENST00000461228 RPS28P62857 69 aaKnown RBP6.79□□□□□ -1.32
DNMT3A-207ENST00000461228 C8orf17Q9NRJ1 99 aa6.79□□□□□ -1.32
DNMT3A-207ENST00000461228 H1FX-AS1Q4G0G2 97 aa6.78□□□□□ -1.32
DNMT3A-207ENST00000461228 NDUFC1O43677 76 aa6.74□□□□□ -1.33
DNMT3A-207ENST00000461228 ATP5EP56381 51 aaPredicted RBP6.72□□□□□ -1.33
DNMT3A-207ENST00000461228 NREPQ16612 68 aa6.71□□□□□ -1.34
DNMT3A-207ENST00000461228 C20orf197Q8N268 126 aa6.7□□□□□ -1.34
DNMT3A-207ENST00000461228 TMEM254Q8TBM7 123 aa6.7□□□□□ -1.34
DNMT3A-207ENST00000461228 MDN1Q9NU22 5596 aa6.68□□□□□ -1.34
DNMT3A-207ENST00000461228 BPY2O14599 106 aa6.68□□□□□ -1.34
DNMT3A-207ENST00000461228 KLKP1Q107X0 134 aa6.68□□□□□ -1.34
DNMT3A-207ENST00000461228 PRR15Q8IV56 129 aa6.68□□□□□ -1.34
DNMT3A-207ENST00000461228 A6NN06 94 aa6.67□□□□□ -1.34
DNMT3A-207ENST00000461228 MRPL34Q9BQ48 92 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms