RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 C1orf134Q5TEV5 83 aa3.07□□□□□ -1.92
ATPAF1-203ENST00000460928 Q6ZRN7 208 aaPredicted RBP3.07□□□□□ -1.92
ATPAF1-203ENST00000460928 MIR7-3HGQ8N6C7 128 aa3.07□□□□□ -1.92
ATPAF1-203ENST00000460928 C20orf203Q8NBC4 194 aa3.07□□□□□ -1.92
ATPAF1-203ENST00000460928 C1orf64Q8NEQ6 169 aa3.07□□□□□ -1.92
ATPAF1-203ENST00000460928 Q9BRP9 147 aa3.07□□□□□ -1.92
ATPAF1-203ENST00000460928 A0A1B0GW54 56 aa3.06□□□□□ -1.92
ATPAF1-203ENST00000460928 FAM168BA1KXE4 195 aa3.06□□□□□ -1.92
ATPAF1-203ENST00000460928 BPY2O14599 106 aa3.06□□□□□ -1.92
ATPAF1-203ENST00000460928 PSPHP1O15172 72 aa3.06□□□□□ -1.92
ATPAF1-203ENST00000460928 ANGP03950 147 aaKnown RBP3.06□□□□□ -1.92
ATPAF1-203ENST00000460928 LINC01556Q5JQF7 62 aa3.06□□□□□ -1.92
ATPAF1-203ENST00000460928 FAM104AQ969W3 186 aa3.06□□□□□ -1.92
ATPAF1-203ENST00000460928 DNAH8Q96JB1 4490 aa3.06□□□□□ -1.92
ATPAF1-203ENST00000460928 LRP1BQ9NZR2 4599 aa3.05□□□□□ -1.92
ATPAF1-203ENST00000460928 IGKV2D-24A0A075B6R9 120 aa3.05□□□□□ -1.92
ATPAF1-203ENST00000460928 A0A0J9YXV3 536 aa3.05□□□□□ -1.92
ATPAF1-203ENST00000460928 CHKB-CPT1BH3BT56 60 aa3.05□□□□□ -1.92
ATPAF1-203ENST00000460928 C9orf116Q5BN46 136 aaPredicted RBP3.05□□□□□ -1.92
ATPAF1-203ENST00000460928 Q6ZQT0 140 aa3.05□□□□□ -1.92
ATPAF1-203ENST00000460928 C7orf33Q8WU49 177 aa3.05□□□□□ -1.92
ATPAF1-203ENST00000460928 CDC42SE2Q9NRR3 84 aa3.05□□□□□ -1.92
ATPAF1-203ENST00000460928 RNF213Q63HN8 5207 aa3.04□□□□□ -1.92
ATPAF1-203ENST00000460928 NCR3O14931 201 aa3.04□□□□□ -1.92
ATPAF1-203ENST00000460928 PRR3P79522 188 aaKnown RBP3.04□□□□□ -1.92
ATPAF1-203ENST00000460928 HAMPP81172 84 aa3.04□□□□□ -1.92
ATPAF1-203ENST00000460928 KRTAP26-1Q6PEX3 210 aa3.04□□□□□ -1.92
ATPAF1-203ENST00000460928 LINC00337Q8N6G1 96 aa3.04□□□□□ -1.92
ATPAF1-203ENST00000460928 SPANXA2-OT1Q8N9U9 137 aa3.04□□□□□ -1.92
ATPAF1-203ENST00000460928 ZCCHC13Q8WW36 166 aaKnown RBP3.04□□□□□ -1.92
ATPAF1-203ENST00000460928 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.03□□□□□ -1.92
ATPAF1-203ENST00000460928 A0A087WTM6 91 aa3.03□□□□□ -1.92
ATPAF1-203ENST00000460928 LRCOL1A6NCL2 159 aa3.03□□□□□ -1.92
ATPAF1-203ENST00000460928 REG3AQ06141 175 aa3.03□□□□□ -1.92
ATPAF1-203ENST00000460928 C9orf129Q5T035 196 aaKnown RBP3.03□□□□□ -1.92
ATPAF1-203ENST00000460928 CASC2Q6XLA1 102 aa3.03□□□□□ -1.92
ATPAF1-203ENST00000460928 SCXQ7RTU7 201 aa3.03□□□□□ -1.92
ATPAF1-203ENST00000460928 SPTSSBQ8NFR3 76 aa3.03□□□□□ -1.92
ATPAF1-203ENST00000460928 HSPG2P98160 4391 aa3.03□□□□□ -1.92
ATPAF1-203ENST00000460928 APOBP04114 4563 aaKnown RBP3.02□□□□□ -1.93
ATPAF1-203ENST00000460928 H3BPC8 53 aa3.02□□□□□ -1.93
ATPAF1-203ENST00000460928 COX6A2Q02221 97 aa3.02□□□□□ -1.93
ATPAF1-203ENST00000460928 SMIM11BQ8TCY0 68 aa3.02□□□□□ -1.93
ATPAF1-203ENST00000460928 PRR34Q9NV39 138 aa3.02□□□□□ -1.93
ATPAF1-203ENST00000460928 IGHV3-64A0A075B6Q5 118 aa3.01□□□□□ -1.93
ATPAF1-203ENST00000460928 LINC00959A0A1B0GUT2 108 aa3.01□□□□□ -1.93
ATPAF1-203ENST00000460928 A6NED7 52 aa3.01□□□□□ -1.93
ATPAF1-203ENST00000460928 DSCR10P59022 87 aa3.01□□□□□ -1.93
ATPAF1-203ENST00000460928 KRTAP10-1P60331 282 aa3.01□□□□□ -1.93
ATPAF1-203ENST00000460928 MYCBP2O75592 4640 aa3□□□□□ -1.93
ATPAF1-203ENST00000460928 MUC2Q02817 5179 aa3□□□□□ -1.93
ATPAF1-203ENST00000460928 FLG2Q5D862 2391 aaPredicted RBP3□□□□□ -1.93
ATPAF1-203ENST00000460928 IGHV6-1A0A0B4J1U7 121 aa3□□□□□ -1.93
ATPAF1-203ENST00000460928 CHTF8P0CG12 524 aa3□□□□□ -1.93
ATPAF1-203ENST00000460928 MOBPQ13875 183 aa3□□□□□ -1.93
ATPAF1-203ENST00000460928 C6orf99Q4VX62 202 aa3□□□□□ -1.93
ATPAF1-203ENST00000460928 Q8N814 137 aa3□□□□□ -1.93
ATPAF1-203ENST00000460928 C15orf56Q8N910 161 aa3□□□□□ -1.93
ATPAF1-203ENST00000460928 SND1-IT1Q9HBX3 110 aa3□□□□□ -1.93
ATPAF1-203ENST00000460928 KRTAP4-16G5E9R7 235 aaPredicted RBP2.99□□□□□ -1.93
ATPAF1-203ENST00000460928 PRR15LQ9BU68 103 aa2.99□□□□□ -1.93
ATPAF1-203ENST00000460928 HMCN2Q8NDA2 5059 aa2.98□□□□□ -1.93
ATPAF1-203ENST00000460928 VPS13BQ7Z7G8 4022 aa2.98□□□□□ -1.93
ATPAF1-203ENST00000460928 IGKV2-28A0A075B6P5 120 aa2.98□□□□□ -1.93
ATPAF1-203ENST00000460928 PANO1I0J062 215 aa2.98□□□□□ -1.93
ATPAF1-203ENST00000460928 IGKV2D-28P01615 120 aa2.98□□□□□ -1.93
ATPAF1-203ENST00000460928 IGKV4-1P06312 121 aa2.98□□□□□ -1.93
ATPAF1-203ENST00000460928 LINC00208Q96KT6 92 aa2.98□□□□□ -1.93
ATPAF1-203ENST00000460928 HIGD2AQ9BW72 106 aa2.98□□□□□ -1.93
ATPAF1-203ENST00000460928 XAGE1AQ9HD64 81 aa2.98□□□□□ -1.93
ATPAF1-203ENST00000460928 LINC01558Q9Y6Z2 57 aa2.98□□□□□ -1.93
ATPAF1-203ENST00000460928 FAT1Q14517 4588 aa2.98□□□□□ -1.93
ATPAF1-203ENST00000460928 ETDCA0A1B0GVM5 59 aa2.97□□□□□ -1.93
ATPAF1-203ENST00000460928 RETNLBQ9BQ08 111 aa2.97□□□□□ -1.93
ATPAF1-203ENST00000460928 PLAC8Q9NZF1 115 aa2.97□□□□□ -1.93
ATPAF1-203ENST00000460928 CDKN2A-AS1Q9UH64 79 aa2.97□□□□□ -1.93
ATPAF1-203ENST00000460928 SMR3BP02814 79 aaPredicted RBP2.96□□□□□ -1.94
ATPAF1-203ENST00000460928 COX7BP24311 80 aa2.96□□□□□ -1.94
ATPAF1-203ENST00000460928 CNBPP62633 177 aaKnown RBP2.96□□□□□ -1.94
ATPAF1-203ENST00000460928 KCNQ1DNQ9H478 68 aa2.96□□□□□ -1.94
ATPAF1-203ENST00000460928 GVQW2A0A096LPI5 108 aaPredicted RBP2.95□□□□□ -1.94
ATPAF1-203ENST00000460928 SPAG11BQ08648 103 aa2.95□□□□□ -1.94
ATPAF1-203ENST00000460928 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
ATPAF1-203ENST00000460928 LCE3AQ5TA76 89 aa2.95□□□□□ -1.94
ATPAF1-203ENST00000460928 UNQ6190/PRO20217Q6UXQ8 127 aa2.95□□□□□ -1.94
ATPAF1-203ENST00000460928 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
ATPAF1-203ENST00000460928 TOMM7Q9P0U1 55 aa2.95□□□□□ -1.94
ATPAF1-203ENST00000460928 IGKV2-24A0A0C4DH68 120 aa2.94□□□□□ -1.94
ATPAF1-203ENST00000460928 A8MU10 97 aa2.94□□□□□ -1.94
ATPAF1-203ENST00000460928 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.94□□□□□ -1.94
ATPAF1-203ENST00000460928 COX7B2Q8TF08 81 aa2.94□□□□□ -1.94
ATPAF1-203ENST00000460928 ZNF706Q9Y5V0 76 aaPredicted RBP2.94□□□□□ -1.94
ATPAF1-203ENST00000460928 PKHD1L1Q86WI1 4243 aa2.94□□□□□ -1.94
ATPAF1-203ENST00000460928 A0A096LNI7 61 aa2.93□□□□□ -1.94
ATPAF1-203ENST00000460928 LINC00575Q6W349 94 aa2.93□□□□□ -1.94
ATPAF1-203ENST00000460928 C9orf163Q8N9P6 203 aa2.93□□□□□ -1.94
ATPAF1-203ENST00000460928 CAMK2N2Q96S95 79 aa2.93□□□□□ -1.94
ATPAF1-203ENST00000460928 C6orf48Q9UBA6 75 aa2.93□□□□□ -1.94
ATPAF1-203ENST00000460928 KRTAP13-3Q3SY46 172 aa2.92□□□□□ -1.94
ATPAF1-203ENST00000460928 FAT4Q6V0I7 4981 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms