RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 KRTAP2-4Q9BYR9 128 aa0.77□□□□□ -2.29
VPS8-215ENST00000460158 KRTAP2-1Q9BYU5 128 aa0.77□□□□□ -2.29
VPS8-215ENST00000460158 LYSTQ99698 3801 aa0.77□□□□□ -2.29
VPS8-215ENST00000460158 APCP25054 2843 aa0.76□□□□□ -2.29
VPS8-215ENST00000460158 TENM2Q9NT68 2774 aa0.75□□□□□ -2.29
VPS8-215ENST00000460158 K7EIM0 57 aa0.75□□□□□ -2.29
VPS8-215ENST00000460158 PRM1P04553 51 aa0.74□□□□□ -2.29
VPS8-215ENST00000460158 KRTAP5-10Q6L8G5 202 aa0.74□□□□□ -2.29
VPS8-215ENST00000460158 APC2O95996 2303 aa0.73□□□□□ -2.29
VPS8-215ENST00000460158 ZNF469Q96JG9 3925 aaPredicted RBP0.73□□□□□ -2.29
VPS8-215ENST00000460158 PRKDCP78527 4128 aaKnown RBP0.73□□□□□ -2.29
VPS8-215ENST00000460158 ACANP16112 2415 aa0.73□□□□□ -2.29
VPS8-215ENST00000460158 TMEM167AQ8TBQ9 72 aa0.73□□□□□ -2.29
VPS8-215ENST00000460158 AHNAK2Q8IVF2 5795 aa0.73□□□□□ -2.29
VPS8-215ENST00000460158 PKD1L1Q8TDX9 2849 aa0.73□□□□□ -2.29
VPS8-215ENST00000460158 SPTBN4Q9H254 2564 aa0.72□□□□□ -2.29
VPS8-215ENST00000460158 PTPN13Q12923 2485 aa0.72□□□□□ -2.29
VPS8-215ENST00000460158 SPART-AS1P0CW21 52 aa0.72□□□□□ -2.29
VPS8-215ENST00000460158 DEFB110Q30KQ9 67 aa0.72□□□□□ -2.29
VPS8-215ENST00000460158 FAT2Q9NYQ8 4349 aa0.72□□□□□ -2.29
VPS8-215ENST00000460158 DMBT1Q9UGM3 2413 aaPredicted RBP0.72□□□□□ -2.29
VPS8-215ENST00000460158 UNC79Q9P2D8 2635 aa0.71□□□□□ -2.3
VPS8-215ENST00000460158 PDZD2O15018 2839 aa0.71□□□□□ -2.3
VPS8-215ENST00000460158 SETD2Q9BYW2 2564 aaPredicted RBP0.71□□□□□ -2.3
VPS8-215ENST00000460158 VPS13BQ7Z7G8 4022 aa0.7□□□□□ -2.3
VPS8-215ENST00000460158 TNXBP22105 4242 aa0.7□□□□□ -2.3
VPS8-215ENST00000460158 ZFYVE26Q68DK2 2539 aa0.7□□□□□ -2.3
VPS8-215ENST00000460158 GCN1Q92616 2671 aaKnown RBP0.7□□□□□ -2.3
VPS8-215ENST00000460158 MAP1BP46821 2468 aaKnown RBP0.7□□□□□ -2.3
VPS8-215ENST00000460158 AHNAKQ09666 5890 aaKnown RBP0.7□□□□□ -2.3
VPS8-215ENST00000460158 MTORP42345 2549 aa0.69□□□□□ -2.3
VPS8-215ENST00000460158 NOTCH1P46531 2555 aa0.69□□□□□ -2.3
VPS8-215ENST00000460158 ZZEF1O43149 2961 aa0.68□□□□□ -2.3
VPS8-215ENST00000460158 NF1P21359 2839 aa0.67□□□□□ -2.3
VPS8-215ENST00000460158 LRRK2Q5S007 2527 aa0.67□□□□□ -2.3
VPS8-215ENST00000460158 RPL39P5Q59GN2 51 aa0.67□□□□□ -2.3
VPS8-215ENST00000460158 FLNCQ14315 2725 aa0.67□□□□□ -2.3
VPS8-215ENST00000460158 KMT2AQ03164 3969 aa0.66□□□□□ -2.3
VPS8-215ENST00000460158 USP24Q9UPU5 2620 aa0.66□□□□□ -2.3
VPS8-215ENST00000460158 FAM186AA6NE01 2351 aa0.66□□□□□ -2.3
VPS8-215ENST00000460158 RIF1Q5UIP0 2472 aaKnown RBP0.66□□□□□ -2.3
VPS8-215ENST00000460158 SACSQ9NZJ4 4579 aa0.65□□□□□ -2.3
VPS8-215ENST00000460158 SETXQ7Z333 2677 aaKnown RBP0.65□□□□□ -2.31
VPS8-215ENST00000460158 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.31
VPS8-215ENST00000460158 FRYQ5TBA9 3013 aa0.64□□□□□ -2.31
VPS8-215ENST00000460158 HUWE1Q7Z6Z7 4374 aaKnown RBP0.64□□□□□ -2.31
VPS8-215ENST00000460158 FLNBO75369 2602 aaKnown RBP0.63□□□□□ -2.31
VPS8-215ENST00000460158 DEFB108AA8MXU0 73 aa0.63□□□□□ -2.31
VPS8-215ENST00000460158 SPRR2DP22532 72 aa0.63□□□□□ -2.31
VPS8-215ENST00000460158 RHPN1-AS1Q9BWJ2 59 aa0.63□□□□□ -2.31
VPS8-215ENST00000460158 MGAQ8IWI9 3026 aa0.63□□□□□ -2.31
VPS8-215ENST00000460158 SPENQ96T58 3664 aaKnown RBP0.63□□□□□ -2.31
VPS8-215ENST00000460158 DCHS2Q6V1P9 2916 aa0.63□□□□□ -2.31
VPS8-215ENST00000460158 NCOR2Q9Y618 2525 aa0.63□□□□□ -2.31
VPS8-215ENST00000460158 DNAH11Q96DT5 4516 aa0.63□□□□□ -2.31
VPS8-215ENST00000460158 ANKRD11Q6UB99 2663 aaPredicted RBP0.62□□□□□ -2.31
VPS8-215ENST00000460158 VPS13DQ5THJ4 4388 aa0.62□□□□□ -2.31
VPS8-215ENST00000460158 SPG11Q96JI7 2443 aa0.62□□□□□ -2.31
VPS8-215ENST00000460158 ACACBO00763 2458 aa0.62□□□□□ -2.31
VPS8-215ENST00000460158 COL12A1Q99715 3063 aa0.61□□□□□ -2.31
VPS8-215ENST00000460158 DMXL1Q9Y485 3027 aa0.61□□□□□ -2.31
VPS8-215ENST00000460158 H3BUX3 64 aa0.61□□□□□ -2.31
VPS8-215ENST00000460158 MUC5BQ9HC84 5762 aaPredicted RBP0.61□□□□□ -2.31
VPS8-215ENST00000460158 NBEAL2Q6ZNJ1 2754 aa0.61□□□□□ -2.31
VPS8-215ENST00000460158 USP9YO00507 2555 aaPredicted RBP0.6□□□□□ -2.31
VPS8-215ENST00000460158 EPG5Q9HCE0 2579 aa0.6□□□□□ -2.31
VPS8-215ENST00000460158 STAB1Q9NY15 2570 aa0.6□□□□□ -2.31
VPS8-215ENST00000460158 SPRR2BP35325 72 aa0.6□□□□□ -2.31
VPS8-215ENST00000460158 CRYBG3Q68DQ2 2970 aa0.6□□□□□ -2.31
VPS8-215ENST00000460158 ITPR3Q14573 2671 aa0.6□□□□□ -2.31
VPS8-215ENST00000460158 NSD1Q96L73 2696 aaPredicted RBP0.6□□□□□ -2.31
VPS8-215ENST00000460158 MYCBP2O75592 4640 aa0.6□□□□□ -2.31
VPS8-215ENST00000460158 DNAH3Q8TD57 4116 aa0.59□□□□□ -2.31
VPS8-215ENST00000460158 TACC2O95359 2948 aa0.59□□□□□ -2.31
VPS8-215ENST00000460158 ZFHX4Q86UP3 3567 aa0.59□□□□□ -2.31
VPS8-215ENST00000460158 TENM3Q9P273 2699 aa0.59□□□□□ -2.32
VPS8-215ENST00000460158 ANKHD1Q8IWZ3 2542 aaKnown RBP0.59□□□□□ -2.32
VPS8-215ENST00000460158 A0A096LNI7 61 aa0.58□□□□□ -2.32
VPS8-215ENST00000460158 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
VPS8-215ENST00000460158 SONP18583 2426 aaKnown RBP0.58□□□□□ -2.32
VPS8-215ENST00000460158 CUBNO60494 3623 aa0.58□□□□□ -2.32
VPS8-215ENST00000460158 COL7A1Q02388 2944 aa0.58□□□□□ -2.32
VPS8-215ENST00000460158 NBPF19A0A087WUL8 3843 aa0.57□□□□□ -2.32
VPS8-215ENST00000460158 KRTAP8-1Q8IUC2 63 aa0.57□□□□□ -2.32
VPS8-215ENST00000460158 CELSR3Q9NYQ7 3312 aa0.57□□□□□ -2.32
VPS8-215ENST00000460158 TLN2Q9Y4G6 2542 aa0.57□□□□□ -2.32
VPS8-215ENST00000460158 CACNA1AO00555 2505 aa0.56□□□□□ -2.32
VPS8-215ENST00000460158 GPR98Q8WXG9 6306 aa0.55□□□□□ -2.32
VPS8-215ENST00000460158 DNAH7Q8WXX0 4024 aa0.55□□□□□ -2.32
VPS8-215ENST00000460158 DYNC2H1Q8NCM8 4307 aaKnown RBP0.55□□□□□ -2.32
VPS8-215ENST00000460158 HECTD4Q9Y4D8 3996 aa0.55□□□□□ -2.32
VPS8-215ENST00000460158 PKHD1L1Q86WI1 4243 aa0.55□□□□□ -2.32
VPS8-215ENST00000460158 ZANQ9Y493 2812 aa0.55□□□□□ -2.32
VPS8-215ENST00000460158 HRNRQ86YZ3 2850 aaPredicted RBP0.55□□□□□ -2.32
VPS8-215ENST00000460158 PKD1P98161 4303 aa0.55□□□□□ -2.32
VPS8-215ENST00000460158 NBEAQ8NFP9 2946 aa0.54□□□□□ -2.32
VPS8-215ENST00000460158 UTP20O75691 2785 aaKnown RBP0.54□□□□□ -2.32
VPS8-215ENST00000460158 IGSF10Q6WRI0 2623 aa0.53□□□□□ -2.32
VPS8-215ENST00000460158 FLGP20930 4061 aaPredicted RBP0.53□□□□□ -2.32
VPS8-215ENST00000460158 APELAP0DMC3 54 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms