RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 PPDPFLQ8WWR9 84 aa2.37□□□□□ -2.03
GTF3C3-208ENST00000455546 RAB37Q96AX2 223 aa2.37□□□□□ -2.03
GTF3C3-208ENST00000455546 TRBV20-1A0A075B6N2 111 aa2.36□□□□□ -2.03
GTF3C3-208ENST00000455546 A0A1W2PNM2 257 aa2.36□□□□□ -2.03
GTF3C3-208ENST00000455546 H0YGX0 51 aa2.36□□□□□ -2.03
GTF3C3-208ENST00000455546 SNCGO76070 127 aa2.36□□□□□ -2.03
GTF3C3-208ENST00000455546 DEFB116Q30KQ4 102 aa2.36□□□□□ -2.03
GTF3C3-208ENST00000455546 SS18L2Q9UHA2 77 aa2.36□□□□□ -2.03
GTF3C3-208ENST00000455546 DLEU1O43261 78 aa2.35□□□□□ -2.03
GTF3C3-208ENST00000455546 IGKV4-1P06312 121 aa2.35□□□□□ -2.03
GTF3C3-208ENST00000455546 LINC00313P59037 77 aa2.35□□□□□ -2.03
GTF3C3-208ENST00000455546 SPATA45Q537H7 98 aa2.35□□□□□ -2.03
GTF3C3-208ENST00000455546 LCE3CQ5T5A8 94 aa2.35□□□□□ -2.03
GTF3C3-208ENST00000455546 C2orf91Q6ZV80 131 aa2.35□□□□□ -2.03
GTF3C3-208ENST00000455546 A0A0B4J2C4 111 aa2.34□□□□□ -2.03
GTF3C3-208ENST00000455546 FAM236DA0A1B0GTK5 79 aa2.34□□□□□ -2.03
GTF3C3-208ENST00000455546 MT2AP02795 61 aa2.34□□□□□ -2.03
GTF3C3-208ENST00000455546 FAM236CP0DP71 79 aa2.34□□□□□ -2.03
GTF3C3-208ENST00000455546 CEND1Q8N111 149 aa2.34□□□□□ -2.03
GTF3C3-208ENST00000455546 ANKRD29Q8N6D5 301 aa2.34□□□□□ -2.03
GTF3C3-208ENST00000455546 SIGMAR1Q99720 223 aa2.34□□□□□ -2.03
GTF3C3-208ENST00000455546 HIGD1BQ9P298 99 aa2.34□□□□□ -2.03
GTF3C3-208ENST00000455546 PRO1854Q9UHT4 67 aa2.34□□□□□ -2.03
GTF3C3-208ENST00000455546 MT1FP04733 61 aa2.33□□□□□ -2.04
GTF3C3-208ENST00000455546 FXYD2P54710 66 aa2.33□□□□□ -2.04
GTF3C3-208ENST00000455546 IGHV6-1A0A0B4J1U7 121 aa2.32□□□□□ -2.04
GTF3C3-208ENST00000455546 HRES1P13985 223 aa2.32□□□□□ -2.04
GTF3C3-208ENST00000455546 S100A1P23297 94 aa2.32□□□□□ -2.04
GTF3C3-208ENST00000455546 KRTAP10-10P60014 251 aa2.32□□□□□ -2.04
GTF3C3-208ENST00000455546 MTURNQ8N3F0 131 aa2.32□□□□□ -2.04
GTF3C3-208ENST00000455546 VAMP8Q9BV40 100 aa2.32□□□□□ -2.04
GTF3C3-208ENST00000455546 LINC00472Q9H8W2 130 aa2.32□□□□□ -2.04
GTF3C3-208ENST00000455546 TRBV7-4A0A0J9YYF1 115 aa2.31□□□□□ -2.04
GTF3C3-208ENST00000455546 A0A1B0GX51 115 aa2.31□□□□□ -2.04
GTF3C3-208ENST00000455546 K7ERJ3 54 aa2.31□□□□□ -2.04
GTF3C3-208ENST00000455546 CCKP06307 115 aa2.31□□□□□ -2.04
GTF3C3-208ENST00000455546 PSMB2P49721 201 aa2.31□□□□□ -2.04
GTF3C3-208ENST00000455546 ORMDL1Q9P0S3 153 aa2.31□□□□□ -2.04
GTF3C3-208ENST00000455546 RBM12B-AS1Q9P1G2 102 aa2.31□□□□□ -2.04
GTF3C3-208ENST00000455546 TMEM256-PLSCR3K7ERE1 68 aa2.3□□□□□ -2.04
GTF3C3-208ENST00000455546 DNAL4O96015 105 aa2.3□□□□□ -2.04
GTF3C3-208ENST00000455546 TRACP01848 142 aa2.3□□□□□ -2.04
GTF3C3-208ENST00000455546 KRTAP10-7P60409 375 aaPredicted RBP2.3□□□□□ -2.04
GTF3C3-208ENST00000455546 VPS25Q9BRG1 176 aa2.3□□□□□ -2.04
GTF3C3-208ENST00000455546 SSPOA2VEC9 5147 aa2.29□□□□□ -2.04
GTF3C3-208ENST00000455546 USH2AO75445 5202 aa2.28□□□□□ -2.04
GTF3C3-208ENST00000455546 A0A1B0GVX0 72 aa2.28□□□□□ -2.04
GTF3C3-208ENST00000455546 COX6CP09669 75 aa2.28□□□□□ -2.04
GTF3C3-208ENST00000455546 SPINK7P58062 85 aa2.28□□□□□ -2.04
GTF3C3-208ENST00000455546 H3BQ85 93 aa2.27□□□□□ -2.05
GTF3C3-208ENST00000455546 BAALC-AS2P0C853 105 aa2.27□□□□□ -2.05
GTF3C3-208ENST00000455546 SCGB1C2P0DMR2 95 aa2.27□□□□□ -2.05
GTF3C3-208ENST00000455546 KRTAP10-5P60370 271 aa2.27□□□□□ -2.05
GTF3C3-208ENST00000455546 RBM3P98179 157 aaKnown RBP2.27□□□□□ -2.05
GTF3C3-208ENST00000455546 HSD52Q0P140 79 aa2.27□□□□□ -2.05
GTF3C3-208ENST00000455546 PYY3Q5JQD4 70 aa2.27□□□□□ -2.05
GTF3C3-208ENST00000455546 ZCCHC13Q8WW36 166 aaKnown RBP2.27□□□□□ -2.05
GTF3C3-208ENST00000455546 C8orf87E5RJ46 101 aa2.26□□□□□ -2.05
GTF3C3-208ENST00000455546 DSCR8Q96T75 97 aa2.26□□□□□ -2.05
GTF3C3-208ENST00000455546 C9JAW5 83 aa2.25□□□□□ -2.05
GTF3C3-208ENST00000455546 LYRM7Q5U5X0 104 aa2.25□□□□□ -2.05
GTF3C3-208ENST00000455546 Q6ZQT0 140 aa2.25□□□□□ -2.05
GTF3C3-208ENST00000455546 WFDC13Q8IUB5 93 aa2.24□□□□□ -2.05
GTF3C3-208ENST00000455546 NAA38Q9BRA0 125 aaKnown RBP2.24□□□□□ -2.05
GTF3C3-208ENST00000455546 C8orf17Q9NRJ1 99 aa2.24□□□□□ -2.05
GTF3C3-208ENST00000455546 UQCR10Q9UDW1 63 aa2.24□□□□□ -2.05
GTF3C3-208ENST00000455546 FCGBPQ9Y6R7 5405 aaPredicted RBP2.24□□□□□ -2.05
GTF3C3-208ENST00000455546 IGKV3D-7A0A0C4DH55 119 aa2.23□□□□□ -2.05
GTF3C3-208ENST00000455546 J3KT08 172 aa2.23□□□□□ -2.05
GTF3C3-208ENST00000455546 NDUFB1O75438 58 aa2.23□□□□□ -2.05
GTF3C3-208ENST00000455546 A8MWP4 228 aa2.22□□□□□ -2.05
GTF3C3-208ENST00000455546 KRTAP19-6Q3LI70 58 aa2.22□□□□□ -2.05
GTF3C3-208ENST00000455546 LCE1EQ5T753 118 aa2.22□□□□□ -2.05
GTF3C3-208ENST00000455546 SYNE2Q8WXH0 6885 aaKnown RBP2.22□□□□□ -2.05
GTF3C3-208ENST00000455546 SEC61GP60059 68 aa2.21□□□□□ -2.06
GTF3C3-208ENST00000455546 C14orf132Q9NPU4 83 aa2.21□□□□□ -2.06
GTF3C3-208ENST00000455546 MACF1Q9UPN3 7388 aaKnown RBP2.2□□□□□ -2.06
GTF3C3-208ENST00000455546 ATXN8Q156A1 80 aa2.2□□□□□ -2.06
GTF3C3-208ENST00000455546 PRR15Q8IV56 129 aa2.2□□□□□ -2.06
GTF3C3-208ENST00000455546 LINC00846Q9NV44 126 aa2.2□□□□□ -2.06
GTF3C3-208ENST00000455546 LOC110117498A0A087WWA1 95 aa2.19□□□□□ -2.06
GTF3C3-208ENST00000455546 JMJD7-PLA2G4BH0Y9G9 81 aa2.19□□□□□ -2.06
GTF3C3-208ENST00000455546 NDUFS5O43920 106 aa2.19□□□□□ -2.06
GTF3C3-208ENST00000455546 NREPQ16612 68 aa2.19□□□□□ -2.06
GTF3C3-208ENST00000455546 H1FX-AS1Q4G0G2 97 aa2.19□□□□□ -2.06
GTF3C3-208ENST00000455546 Q5W150 140 aa2.19□□□□□ -2.06
GTF3C3-208ENST00000455546 MRPL34Q9BQ48 92 aaKnown RBP2.19□□□□□ -2.06
GTF3C3-208ENST00000455546 MMP24-AS1A0A0U1RRL7 71 aa2.18□□□□□ -2.06
GTF3C3-208ENST00000455546 K7EQZ3 153 aa2.18□□□□□ -2.06
GTF3C3-208ENST00000455546 TMEM254Q8TBM7 123 aa2.18□□□□□ -2.06
GTF3C3-208ENST00000455546 A0A1B0GW54 56 aa2.17□□□□□ -2.06
GTF3C3-208ENST00000455546 hDV103S1A0JD37 113 aa2.17□□□□□ -2.06
GTF3C3-208ENST00000455546 PCP4L1A6NKN8 68 aa2.17□□□□□ -2.06
GTF3C3-208ENST00000455546 A8MU10 97 aa2.17□□□□□ -2.06
GTF3C3-208ENST00000455546 PDE6GP18545 87 aa2.17□□□□□ -2.06
GTF3C3-208ENST00000455546 KRTAP5-11Q6L8G4 156 aa2.17□□□□□ -2.06
GTF3C3-208ENST00000455546 M0R143 59 aa2.16□□□□□ -2.06
GTF3C3-208ENST00000455546 C4orf26Q17RF5 130 aa2.16□□□□□ -2.06
GTF3C3-208ENST00000455546 KRTAP6-3Q3LI67 103 aa2.16□□□□□ -2.06
GTF3C3-208ENST00000455546 LCE3EQ5T5B0 92 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms