RNA–Protein interactions for RNA: ENST00000453297.5

MCF2L-219, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 1,819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-219ENST00000453297 IGHV6-1A0A0B4J1U7 121 aa14.07□□□□□ -0.16
MCF2L-219ENST00000453297 RYR1P21817 5038 aa14.07□□□□□ -0.16
MCF2L-219ENST00000453297 KRTAP17-1Q9BYP8 105 aa14.06□□□□□ -0.16
MCF2L-219ENST00000453297 SPAG11AQ6PDA7 123 aa14.06□□□□□ -0.16
MCF2L-219ENST00000453297 C8orf17Q9NRJ1 99 aa14.06□□□□□ -0.16
MCF2L-219ENST00000453297 RPS29P62273 56 aaKnown RBP14.02□□□□□ -0.16
MCF2L-219ENST00000453297 hDV103S1A0JD37 113 aa14.01□□□□□ -0.17
MCF2L-219ENST00000453297 NOTCH2NLQ7Z3S9 236 aa13.99□□□□□ -0.17
MCF2L-219ENST00000453297 EPPK1P58107 5090 aaKnown RBP13.98□□□□□ -0.17
MCF2L-219ENST00000453297 C20orf197Q8N268 126 aa13.97□□□□□ -0.17
MCF2L-219ENST00000453297 Q8N1X5 172 aa13.95□□□□□ -0.18
MCF2L-219ENST00000453297 KIAA1109Q2LD37 5005 aa13.92□□□□□ -0.18
MCF2L-219ENST00000453297 CYSTM1Q9H1C7 97 aa13.92□□□□□ -0.18
MCF2L-219ENST00000453297 C8orf87E5RJ46 101 aa13.9□□□□□ -0.18
MCF2L-219ENST00000453297 TMEM254Q8TBM7 123 aa13.9□□□□□ -0.18
MCF2L-219ENST00000453297 MRPL34Q9BQ48 92 aaKnown RBP13.88□□□□□ -0.19
MCF2L-219ENST00000453297 KRTAP10-8P60410 259 aa13.87□□□□□ -0.19
MCF2L-219ENST00000453297 KLKP1Q107X0 134 aa13.87□□□□□ -0.19
MCF2L-219ENST00000453297 SNURFQ9Y675 71 aa13.86□□□□□ -0.19
MCF2L-219ENST00000453297 LINC00313P59037 77 aa13.85□□□□□ -0.19
MCF2L-219ENST00000453297 C5orf47Q569G3 176 aa13.84□□□□□ -0.19
MCF2L-219ENST00000453297 A0A0U1RQV1 116 aa13.82□□□□□ -0.2
MCF2L-219ENST00000453297 LRP1Q07954 4544 aaKnown RBP13.79□□□□□ -0.2
MCF2L-219ENST00000453297 NDUFS5O43920 106 aa13.78□□□□□ -0.2
MCF2L-219ENST00000453297 TP53AIP1Q9HCN2 124 aa13.78□□□□□ -0.2
MCF2L-219ENST00000453297 TNXBP22105 4242 aa13.77□□□□□ -0.2
MCF2L-219ENST00000453297 FAT3Q8TDW7 4589 aa13.73□□□□□ -0.21
MCF2L-219ENST00000453297 H0Y9P7 68 aa13.73□□□□□ -0.21
MCF2L-219ENST00000453297 MP68P56378 58 aa13.73□□□□□ -0.21
MCF2L-219ENST00000453297 KRTAP16-1A8MUX0 517 aa13.71□□□□□ -0.21
MCF2L-219ENST00000453297 H7BZZ5 65 aa13.71□□□□□ -0.21
MCF2L-219ENST00000453297 ZCCHC13Q8WW36 166 aaKnown RBP13.71□□□□□ -0.22
MCF2L-219ENST00000453297 FLG2Q5D862 2391 aaPredicted RBP13.7□□□□□ -0.22
MCF2L-219ENST00000453297 TRAV22A0A0B4J277 110 aa13.7□□□□□ -0.22
MCF2L-219ENST00000453297 NDUFC1O43677 76 aa13.69□□□□□ -0.22
MCF2L-219ENST00000453297 RETNLBQ9BQ08 111 aa13.68□□□□□ -0.22
MCF2L-219ENST00000453297 Q8N9P0 234 aaPredicted RBP13.67□□□□□ -0.22
MCF2L-219ENST00000453297 LINC00208Q96KT6 92 aa13.67□□□□□ -0.22
MCF2L-219ENST00000453297 TMEM258P61165 79 aa13.66□□□□□ -0.22
MCF2L-219ENST00000453297 H3BPC8 53 aa13.65□□□□□ -0.22
MCF2L-219ENST00000453297 MT1HL1P0DM35 61 aa13.65□□□□□ -0.22
MCF2L-219ENST00000453297 KRTAP4-5Q9BYR2 181 aa13.62□□□□□ -0.23
MCF2L-219ENST00000453297 C1orf64Q8NEQ6 169 aa13.6□□□□□ -0.23
MCF2L-219ENST00000453297 Q5W150 140 aa13.58□□□□□ -0.24
MCF2L-219ENST00000453297 KRTAP13-3Q3SY46 172 aa13.56□□□□□ -0.24
MCF2L-219ENST00000453297 OXTP01178 125 aa13.55□□□□□ -0.24
MCF2L-219ENST00000453297 MYCBP2O75592 4640 aa13.53□□□□□ -0.24
MCF2L-219ENST00000453297 C9orf92A6NGG3 77 aa13.53□□□□□ -0.24
MCF2L-219ENST00000453297 FAM236DA0A1B0GTK5 79 aa13.5□□□□□ -0.25
MCF2L-219ENST00000453297 FAM236CP0DP71 79 aa13.5□□□□□ -0.25
MCF2L-219ENST00000453297 DMBT1Q9UGM3 2413 aaPredicted RBP13.47□□□□□ -0.25
MCF2L-219ENST00000453297 FP248Q71RG6 208 aaPredicted RBP13.46□□□□□ -0.25
MCF2L-219ENST00000453297 LOC101927531A0A1B0GV80 90 aa13.41□□□□□ -0.26
MCF2L-219ENST00000453297 ATP5EP56381 51 aaPredicted RBP13.41□□□□□ -0.26
MCF2L-219ENST00000453297 C20orf166-AS1Q96NR2 134 aa13.4□□□□□ -0.26
MCF2L-219ENST00000453297 A8MUU9 505 aa13.39□□□□□ -0.27
MCF2L-219ENST00000453297 BIRC6Q9NR09 4857 aa13.39□□□□□ -0.27
MCF2L-219ENST00000453297 PCOTHQ58A44 107 aa13.36□□□□□ -0.27
MCF2L-219ENST00000453297 IGLV7-46A0A075B6I9 117 aa13.35□□□□□ -0.27
MCF2L-219ENST00000453297 CYP4F30PQ9H0H9 118 aa13.34□□□□□ -0.27
MCF2L-219ENST00000453297 IGKV2-30P06310 120 aa13.31□□□□□ -0.28
MCF2L-219ENST00000453297 SPANXA2-OT1Q8N9U9 137 aa13.31□□□□□ -0.28
MCF2L-219ENST00000453297 HERC2O95714 4834 aa13.28□□□□□ -0.28
MCF2L-219ENST00000453297 RPS28P62857 69 aaKnown RBP13.27□□□□□ -0.28
MCF2L-219ENST00000453297 PRR4Q16378 134 aa13.27□□□□□ -0.28
MCF2L-219ENST00000453297 Q75L30 129 aa13.26□□□□□ -0.29
MCF2L-219ENST00000453297 SERP1Q9Y6X1 66 aa13.25□□□□□ -0.29
MCF2L-219ENST00000453297 ABCA13Q86UQ4 5058 aa13.23□□□□□ -0.29
MCF2L-219ENST00000453297 IGKV2D-30A0A075B6S6 120 aa13.21□□□□□ -0.29
MCF2L-219ENST00000453297 XP32Q5T750 250 aa13.16□□□□□ -0.3
MCF2L-219ENST00000453297 J3QL48 77 aa13.16□□□□□ -0.3
MCF2L-219ENST00000453297 HRES1P13985 223 aa13.14□□□□□ -0.31
MCF2L-219ENST00000453297 C7orf65Q6ZTY9 151 aa13.12□□□□□ -0.31
MCF2L-219ENST00000453297 RPL37P61927 97 aaKnown RBP13.11□□□□□ -0.31
MCF2L-219ENST00000453297 TPRXLQ17RH7 258 aa13.07□□□□□ -0.32
MCF2L-219ENST00000453297 ATP11AUNQ6ZP68 121 aa13.06□□□□□ -0.32
MCF2L-219ENST00000453297 SPINK7P58062 85 aa12.99□□□□□ -0.33
MCF2L-219ENST00000453297 DMAC1Q96GE9 116 aa12.95□□□□□ -0.34
MCF2L-219ENST00000453297 COA5Q86WW8 74 aa12.94□□□□□ -0.34
MCF2L-219ENST00000453297 SMIM26A0A096LP01 95 aa12.92□□□□□ -0.34
MCF2L-219ENST00000453297 ACYP2P14621 99 aa12.89□□□□□ -0.35
MCF2L-219ENST00000453297 C4orf26Q17RF5 130 aa12.87□□□□□ -0.35
MCF2L-219ENST00000453297 LPAP08519 4548 aa12.83□□□□□ -0.36
MCF2L-219ENST00000453297 LRP2P98164 4655 aa12.76□□□□□ -0.37
MCF2L-219ENST00000453297 A8MUN3 132 aa12.74□□□□□ -0.37
MCF2L-219ENST00000453297 KRTAP3-1Q9BYR8 98 aa12.72□□□□□ -0.37
MCF2L-219ENST00000453297 MPLKIPQ8TAP9 179 aa12.7□□□□□ -0.38
MCF2L-219ENST00000453297 PCLOQ9Y6V0 5065 aa12.7□□□□□ -0.38
MCF2L-219ENST00000453297 CHKB-CPT1BH3BT56 60 aa12.68□□□□□ -0.38
MCF2L-219ENST00000453297 COX6B2Q6YFQ2 88 aa12.68□□□□□ -0.38
MCF2L-219ENST00000453297 Q1T7F1 81 aa12.64□□□□□ -0.39
MCF2L-219ENST00000453297 SEC61BP60468 96 aaKnown RBP12.61□□□□□ -0.39
MCF2L-219ENST00000453297 V9GYY9 64 aa12.55□□□□□ -0.4
MCF2L-219ENST00000453297 LINC01558Q9Y6Z2 57 aa12.46□□□□□ -0.41
MCF2L-219ENST00000453297 HERC1Q15751 4861 aa12.45□□□□□ -0.42
MCF2L-219ENST00000453297 PSPHP1O15172 72 aa12.42□□□□□ -0.42
MCF2L-219ENST00000453297 MUC17Q685J3 4493 aa12.41□□□□□ -0.42
MCF2L-219ENST00000453297 KRTAP4-1Q9BYQ7 146 aa12.39□□□□□ -0.43
MCF2L-219ENST00000453297 PRR15LQ9BU68 103 aa12.39□□□□□ -0.43
MCF2L-219ENST00000453297 RBM12B-AS1Q9P1G2 102 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms