RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 Q96NJ1 140 aa11.29□□□□□ -0.6
HIGD1A-204ENST00000452906 FAM236AA0A1B0GUQ0 79 aa11.26□□□□□ -0.61
HIGD1A-204ENST00000452906 FAM236BA0A1B0GV22 79 aa11.26□□□□□ -0.61
HIGD1A-204ENST00000452906 DEFB116Q30KQ4 102 aa11.26□□□□□ -0.61
HIGD1A-204ENST00000452906 A0A087WVE0 104 aa11.25□□□□□ -0.61
HIGD1A-204ENST00000452906 K7EQZ3 153 aa11.24□□□□□ -0.61
HIGD1A-204ENST00000452906 PRR15Q8IV56 129 aa11.23□□□□□ -0.61
HIGD1A-204ENST00000452906 Q8N9L7 120 aa11.23□□□□□ -0.61
HIGD1A-204ENST00000452906 ATOX1O00244 68 aa11.21□□□□□ -0.61
HIGD1A-204ENST00000452906 C1orf195Q5TG92 126 aa11.19□□□□□ -0.62
HIGD1A-204ENST00000452906 LRP2P98164 4655 aa11.18□□□□□ -0.62
HIGD1A-204ENST00000452906 A0A1B0GVX0 72 aa11.18□□□□□ -0.62
HIGD1A-204ENST00000452906 HCG22E2RYF7 251 aa11.17□□□□□ -0.62
HIGD1A-204ENST00000452906 SMIM20Q8N5G0 67 aa11.16□□□□□ -0.62
HIGD1A-204ENST00000452906 C8orf87E5RJ46 101 aa11.13□□□□□ -0.63
HIGD1A-204ENST00000452906 ANAPC13Q9BS18 74 aa11.12□□□□□ -0.63
HIGD1A-204ENST00000452906 IGHV6-1A0A0B4J1U7 121 aa11.11□□□□□ -0.63
HIGD1A-204ENST00000452906 CASC2Q6XLA1 102 aa11.1□□□□□ -0.63
HIGD1A-204ENST00000452906 C8orf17Q9NRJ1 99 aa11.09□□□□□ -0.63
HIGD1A-204ENST00000452906 MMP24-AS1A0A0U1RRL7 71 aa11.07□□□□□ -0.64
HIGD1A-204ENST00000452906 RNF213Q63HN8 5207 aa11.07□□□□□ -0.64
HIGD1A-204ENST00000452906 hDV103S1A0JD37 113 aa11.06□□□□□ -0.64
HIGD1A-204ENST00000452906 WFDC13Q8IUB5 93 aa11.06□□□□□ -0.64
HIGD1A-204ENST00000452906 PCP4P48539 62 aa11.04□□□□□ -0.64
HIGD1A-204ENST00000452906 TMEM254Q8TBM7 123 aa11.03□□□□□ -0.64
HIGD1A-204ENST00000452906 LINC00313P59037 77 aa11.02□□□□□ -0.65
HIGD1A-204ENST00000452906 SERP2Q8N6R1 65 aa11.02□□□□□ -0.65
HIGD1A-204ENST00000452906 TRAV7A0A075B6U4 112 aa11.01□□□□□ -0.65
HIGD1A-204ENST00000452906 FP248Q71RG6 208 aaPredicted RBP10.99□□□□□ -0.65
HIGD1A-204ENST00000452906 MRPL34Q9BQ48 92 aaKnown RBP10.97□□□□□ -0.65
HIGD1A-204ENST00000452906 COX7CP15954 63 aa10.95□□□□□ -0.66
HIGD1A-204ENST00000452906 OCR1Q9BZK8 76 aa10.95□□□□□ -0.66
HIGD1A-204ENST00000452906 TP53AIP1Q9HCN2 124 aa10.94□□□□□ -0.66
HIGD1A-204ENST00000452906 UQCRQO14949 82 aa10.93□□□□□ -0.66
HIGD1A-204ENST00000452906 NOTCH2NLQ7Z3S9 236 aa10.9□□□□□ -0.66
HIGD1A-204ENST00000452906 PRR4Q16378 134 aa10.89□□□□□ -0.67
HIGD1A-204ENST00000452906 RETNLBQ9BQ08 111 aa10.89□□□□□ -0.67
HIGD1A-204ENST00000452906 NDUFS5O43920 106 aa10.88□□□□□ -0.67
HIGD1A-204ENST00000452906 C5orf47Q569G3 176 aa10.86□□□□□ -0.67
HIGD1A-204ENST00000452906 LPAP08519 4548 aa10.86□□□□□ -0.67
HIGD1A-204ENST00000452906 Q8N9P0 234 aaPredicted RBP10.83□□□□□ -0.68
HIGD1A-204ENST00000452906 KRTAP16-1A8MUX0 517 aa10.82□□□□□ -0.68
HIGD1A-204ENST00000452906 MP68P56378 58 aa10.82□□□□□ -0.68
HIGD1A-204ENST00000452906 IGLV7-46A0A075B6I9 117 aa10.8□□□□□ -0.68
HIGD1A-204ENST00000452906 H3BPC8 53 aa10.8□□□□□ -0.68
HIGD1A-204ENST00000452906 TRAV22A0A0B4J277 110 aa10.79□□□□□ -0.68
HIGD1A-204ENST00000452906 CCDC179H3BU77 68 aa10.77□□□□□ -0.69
HIGD1A-204ENST00000452906 C20orf197Q8N268 126 aa10.76□□□□□ -0.69
HIGD1A-204ENST00000452906 C9orf92A6NGG3 77 aa10.75□□□□□ -0.69
HIGD1A-204ENST00000452906 H0Y9P7 68 aa10.75□□□□□ -0.69
HIGD1A-204ENST00000452906 KLKP1Q107X0 134 aa10.74□□□□□ -0.69
HIGD1A-204ENST00000452906 C20orf166-AS1Q96NR2 134 aa10.71□□□□□ -0.69
HIGD1A-204ENST00000452906 A0A0U1RQV1 116 aa10.69□□□□□ -0.7
HIGD1A-204ENST00000452906 A8MUU9 505 aa10.69□□□□□ -0.7
HIGD1A-204ENST00000452906 NDUFC1O43677 76 aa10.69□□□□□ -0.7
HIGD1A-204ENST00000452906 KRTAP13-3Q3SY46 172 aa10.67□□□□□ -0.7
HIGD1A-204ENST00000452906 Q75L30 129 aa10.66□□□□□ -0.7
HIGD1A-204ENST00000452906 LINC00208Q96KT6 92 aa10.66□□□□□ -0.7
HIGD1A-204ENST00000452906 TPRXLQ17RH7 258 aa10.65□□□□□ -0.7
HIGD1A-204ENST00000452906 LOC101927531A0A1B0GV80 90 aa10.64□□□□□ -0.71
HIGD1A-204ENST00000452906 C1orf64Q8NEQ6 169 aa10.64□□□□□ -0.71
HIGD1A-204ENST00000452906 SNURFQ9Y675 71 aa10.64□□□□□ -0.71
HIGD1A-204ENST00000452906 MUC2Q02817 5179 aa10.62□□□□□ -0.71
HIGD1A-204ENST00000452906 ZCCHC13Q8WW36 166 aaKnown RBP10.62□□□□□ -0.71
HIGD1A-204ENST00000452906 Q5W150 140 aa10.59□□□□□ -0.71
HIGD1A-204ENST00000452906 XP32Q5T750 250 aa10.56□□□□□ -0.72
HIGD1A-204ENST00000452906 RPL37P61927 97 aaKnown RBP10.55□□□□□ -0.72
HIGD1A-204ENST00000452906 TMEM258P61165 79 aa10.54□□□□□ -0.72
HIGD1A-204ENST00000452906 ATP11AUNQ6ZP68 121 aa10.53□□□□□ -0.72
HIGD1A-204ENST00000452906 H7BZZ5 65 aa10.52□□□□□ -0.73
HIGD1A-204ENST00000452906 IGKV2-30P06310 120 aa10.5□□□□□ -0.73
HIGD1A-204ENST00000452906 CYSTM1Q9H1C7 97 aa10.5□□□□□ -0.73
HIGD1A-204ENST00000452906 ATP5EP56381 51 aaPredicted RBP10.48□□□□□ -0.73
HIGD1A-204ENST00000452906 C7orf65Q6ZTY9 151 aa10.47□□□□□ -0.73
HIGD1A-204ENST00000452906 CYP4F30PQ9H0H9 118 aa10.47□□□□□ -0.73
HIGD1A-204ENST00000452906 IGKV2D-30A0A075B6S6 120 aa10.43□□□□□ -0.74
HIGD1A-204ENST00000452906 SPANXA2-OT1Q8N9U9 137 aa10.42□□□□□ -0.74
HIGD1A-204ENST00000452906 FAM236DA0A1B0GTK5 79 aa10.41□□□□□ -0.74
HIGD1A-204ENST00000452906 FAM236CP0DP71 79 aa10.41□□□□□ -0.74
HIGD1A-204ENST00000452906 PCOTHQ58A44 107 aa10.4□□□□□ -0.74
HIGD1A-204ENST00000452906 MUC17Q685J3 4493 aa10.37□□□□□ -0.75
HIGD1A-204ENST00000452906 FAT4Q6V0I7 4981 aa10.36□□□□□ -0.75
HIGD1A-204ENST00000452906 LCE2AQ5TA79 106 aaPredicted RBP10.36□□□□□ -0.75
HIGD1A-204ENST00000452906 SEC61BP60468 96 aaKnown RBP10.34□□□□□ -0.75
HIGD1A-204ENST00000452906 SPINK7P58062 85 aa10.32□□□□□ -0.76
HIGD1A-204ENST00000452906 HRES1P13985 223 aa10.29□□□□□ -0.76
HIGD1A-204ENST00000452906 KRTAP9-2Q9BYQ4 174 aa10.23□□□□□ -0.77
HIGD1A-204ENST00000452906 SERP1Q9Y6X1 66 aa10.19□□□□□ -0.78
HIGD1A-204ENST00000452906 A8MUN3 132 aa10.18□□□□□ -0.78
HIGD1A-204ENST00000452906 DMAC1Q96GE9 116 aa10.17□□□□□ -0.78
HIGD1A-204ENST00000452906 ACYP2P14621 99 aa10.15□□□□□ -0.78
HIGD1A-204ENST00000452906 RPS28P62857 69 aaKnown RBP10.14□□□□□ -0.79
HIGD1A-204ENST00000452906 C4orf26Q17RF5 130 aa10.12□□□□□ -0.79
HIGD1A-204ENST00000452906 KRTAP4-1Q9BYQ7 146 aa10.1□□□□□ -0.79
HIGD1A-204ENST00000452906 COX6B2Q6YFQ2 88 aa10.09□□□□□ -0.79
HIGD1A-204ENST00000452906 RBM12B-AS1Q9P1G2 102 aa10.06□□□□□ -0.8
HIGD1A-204ENST00000452906 COA5Q86WW8 74 aa10.04□□□□□ -0.8
HIGD1A-204ENST00000452906 CHKB-CPT1BH3BT56 60 aa9.99□□□□□ -0.81
HIGD1A-204ENST00000452906 MPLKIPQ8TAP9 179 aa9.97□□□□□ -0.81
HIGD1A-204ENST00000452906 KRTAP9-6A0A140TA67 174 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms