RNA–Protein interactions for RNA: ENST00000448850.5

APP-210, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-210ENST00000448850 UQCRQO14949 82 aa8.27□□□□□ -1.09
APP-210ENST00000448850 TMEM258P61165 79 aa8.27□□□□□ -1.09
APP-210ENST00000448850 UBL5Q9BZL1 73 aa8.26□□□□□ -1.09
APP-210ENST00000448850 Q6ZVQ6 151 aa8.26□□□□□ -1.09
APP-210ENST00000448850 Q96NJ1 140 aa8.26□□□□□ -1.09
APP-210ENST00000448850 LINC00472Q9H8W2 130 aa8.26□□□□□ -1.09
APP-210ENST00000448850 RETNLBQ9BQ08 111 aa8.24□□□□□ -1.09
APP-210ENST00000448850 FAM236AA0A1B0GUQ0 79 aa8.23□□□□□ -1.09
APP-210ENST00000448850 FAM236BA0A1B0GV22 79 aa8.23□□□□□ -1.09
APP-210ENST00000448850 DEFB116Q30KQ4 102 aa8.22□□□□□ -1.09
APP-210ENST00000448850 A0A0U1RQV1 116 aa8.21□□□□□ -1.1
APP-210ENST00000448850 IGKV4-1P06312 121 aa8.19□□□□□ -1.1
APP-210ENST00000448850 BPY2O14599 106 aa8.17□□□□□ -1.1
APP-210ENST00000448850 FP248Q71RG6 208 aaPredicted RBP8.16□□□□□ -1.1
APP-210ENST00000448850 LINC00643Q86TS7 51 aa8.15□□□□□ -1.1
APP-210ENST00000448850 IMUPQ9GZP8 106 aa8.15□□□□□ -1.11
APP-210ENST00000448850 DSCR10P59022 87 aa8.14□□□□□ -1.11
APP-210ENST00000448850 PRR4Q16378 134 aa8.13□□□□□ -1.11
APP-210ENST00000448850 CXCL6P80162 114 aa8.13□□□□□ -1.11
APP-210ENST00000448850 A8MWP4 228 aa8.12□□□□□ -1.11
APP-210ENST00000448850 ATP5EP2Q5VTU8 51 aa8.12□□□□□ -1.11
APP-210ENST00000448850 IGLV7-46A0A075B6I9 117 aa8.11□□□□□ -1.11
APP-210ENST00000448850 IGKV3D-7A0A0C4DH55 119 aa8.11□□□□□ -1.11
APP-210ENST00000448850 NDUFB1O75438 58 aa8.11□□□□□ -1.11
APP-210ENST00000448850 A0A1B0GVX0 72 aa8.09□□□□□ -1.11
APP-210ENST00000448850 K7EQZ3 153 aa8.08□□□□□ -1.12
APP-210ENST00000448850 COX7CP15954 63 aa8.08□□□□□ -1.12
APP-210ENST00000448850 PRR15Q8IV56 129 aa8.08□□□□□ -1.12
APP-210ENST00000448850 Q8N9L7 120 aa8.08□□□□□ -1.12
APP-210ENST00000448850 HERC1Q15751 4861 aa8.08□□□□□ -1.12
APP-210ENST00000448850 IGHV6-1A0A0B4J1U7 121 aa8.08□□□□□ -1.12
APP-210ENST00000448850 SMIM26A0A096LP01 95 aa8.04□□□□□ -1.12
APP-210ENST00000448850 BRK1Q8WUW1 75 aa8.04□□□□□ -1.12
APP-210ENST00000448850 KRTAP13-3Q3SY46 172 aa8.03□□□□□ -1.12
APP-210ENST00000448850 C9orf92A6NGG3 77 aa8.03□□□□□ -1.12
APP-210ENST00000448850 C8orf87E5RJ46 101 aa8.03□□□□□ -1.12
APP-210ENST00000448850 LINC00313P59037 77 aa8.03□□□□□ -1.12
APP-210ENST00000448850 NOTCH2NLQ7Z3S9 236 aa8.03□□□□□ -1.12
APP-210ENST00000448850 SERP1Q9Y6X1 66 aa8.02□□□□□ -1.13
APP-210ENST00000448850 TPRXLQ17RH7 258 aa8.01□□□□□ -1.13
APP-210ENST00000448850 C8orf17Q9NRJ1 99 aa8.01□□□□□ -1.13
APP-210ENST00000448850 HIST1H4AP62805 103 aaKnown RBP8.01□□□□□ -1.13
APP-210ENST00000448850 MMP24-AS1A0A0U1RRL7 71 aa7.99□□□□□ -1.13
APP-210ENST00000448850 RBM12B-AS1Q9P1G2 102 aa7.98□□□□□ -1.13
APP-210ENST00000448850 KRTAP16-1A8MUX0 517 aa7.96□□□□□ -1.14
APP-210ENST00000448850 HCG22E2RYF7 251 aa7.96□□□□□ -1.14
APP-210ENST00000448850 A0A087WVE0 104 aa7.95□□□□□ -1.14
APP-210ENST00000448850 A0A0A0MQY5 61 aa7.95□□□□□ -1.14
APP-210ENST00000448850 WFDC13Q8IUB5 93 aa7.95□□□□□ -1.14
APP-210ENST00000448850 LPAP08519 4548 aa7.94□□□□□ -1.14
APP-210ENST00000448850 hDV103S1A0JD37 113 aa7.94□□□□□ -1.14
APP-210ENST00000448850 ATOX1O00244 68 aa7.94□□□□□ -1.14
APP-210ENST00000448850 CASC2Q6XLA1 102 aa7.94□□□□□ -1.14
APP-210ENST00000448850 HMCN2Q8NDA2 5059 aa7.94□□□□□ -1.14
APP-210ENST00000448850 TMEM254Q8TBM7 123 aa7.93□□□□□ -1.14
APP-210ENST00000448850 XP32Q5T750 250 aa7.92□□□□□ -1.14
APP-210ENST00000448850 MRPL34Q9BQ48 92 aaKnown RBP7.92□□□□□ -1.14
APP-210ENST00000448850 KTN1-AS1Q86SY8 53 aa7.89□□□□□ -1.15
APP-210ENST00000448850 C20orf166-AS1Q96NR2 134 aa7.89□□□□□ -1.15
APP-210ENST00000448850 Q8N9P0 234 aaPredicted RBP7.88□□□□□ -1.15
APP-210ENST00000448850 LRP2P98164 4655 aa7.87□□□□□ -1.15
APP-210ENST00000448850 A8MUU9 505 aa7.87□□□□□ -1.15
APP-210ENST00000448850 NDUFS5O43920 106 aa7.86□□□□□ -1.15
APP-210ENST00000448850 Q75L30 129 aa7.86□□□□□ -1.15
APP-210ENST00000448850 RPL37P61927 97 aaKnown RBP7.84□□□□□ -1.15
APP-210ENST00000448850 SERP2Q8N6R1 65 aa7.82□□□□□ -1.16
APP-210ENST00000448850 ATP5EP56381 51 aaPredicted RBP7.8□□□□□ -1.16
APP-210ENST00000448850 ATP11AUNQ6ZP68 121 aa7.78□□□□□ -1.16
APP-210ENST00000448850 TP53AIP1Q9HCN2 124 aa7.78□□□□□ -1.16
APP-210ENST00000448850 ZCCHC13Q8WW36 166 aaKnown RBP7.75□□□□□ -1.17
APP-210ENST00000448850 SEC61BP60468 96 aaKnown RBP7.75□□□□□ -1.17
APP-210ENST00000448850 OCR1Q9BZK8 76 aa7.74□□□□□ -1.17
APP-210ENST00000448850 PCOTHQ58A44 107 aa7.73□□□□□ -1.17
APP-210ENST00000448850 Q5W150 140 aa7.72□□□□□ -1.17
APP-210ENST00000448850 LCA10Q71F78 164 aa7.7□□□□□ -1.18
APP-210ENST00000448850 CYSTM1Q9H1C7 97 aa7.69□□□□□ -1.18
APP-210ENST00000448850 MUC17Q685J3 4493 aa7.69□□□□□ -1.18
APP-210ENST00000448850 A8MUN3 132 aa7.67□□□□□ -1.18
APP-210ENST00000448850 TRAV22A0A0B4J277 110 aa7.66□□□□□ -1.18
APP-210ENST00000448850 TRAV7A0A075B6U4 112 aa7.66□□□□□ -1.18
APP-210ENST00000448850 H0Y9P7 68 aa7.63□□□□□ -1.19
APP-210ENST00000448850 NDUFC1O43677 76 aa7.62□□□□□ -1.19
APP-210ENST00000448850 MP68P56378 58 aa7.62□□□□□ -1.19
APP-210ENST00000448850 UBR4Q5T4S7 5183 aa7.61□□□□□ -1.19
APP-210ENST00000448850 SPINK7P58062 85 aa7.59□□□□□ -1.19
APP-210ENST00000448850 KRTAP4-1Q9BYQ7 146 aa7.59□□□□□ -1.19
APP-210ENST00000448850 IGKV2D-30A0A075B6S6 120 aa7.58□□□□□ -1.2
APP-210ENST00000448850 IGKV2-30P06310 120 aa7.58□□□□□ -1.2
APP-210ENST00000448850 LCE2DQ5TA82 110 aaPredicted RBP7.57□□□□□ -1.2
APP-210ENST00000448850 C7orf65Q6ZTY9 151 aa7.57□□□□□ -1.2
APP-210ENST00000448850 LINC00208Q96KT6 92 aa7.57□□□□□ -1.2
APP-210ENST00000448850 C1orf64Q8NEQ6 169 aa7.56□□□□□ -1.2
APP-210ENST00000448850 LOC101927531A0A1B0GV80 90 aa7.55□□□□□ -1.2
APP-210ENST00000448850 H3BPC8 53 aa7.55□□□□□ -1.2
APP-210ENST00000448850 H7BZZ5 65 aa7.55□□□□□ -1.2
APP-210ENST00000448850 KLKP1Q107X0 134 aa7.52□□□□□ -1.2
APP-210ENST00000448850 CYP4F30PQ9H0H9 118 aa7.52□□□□□ -1.2
APP-210ENST00000448850 RNF213Q63HN8 5207 aa7.51□□□□□ -1.21
APP-210ENST00000448850 Q1T7F1 81 aa7.51□□□□□ -1.21
APP-210ENST00000448850 PSPHP1O15172 72 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms