RNA–Protein interactions for RNA: ENST00000448327.1

LINC01564-201, Transcript of long intergenic non-protein coding RNA 1564, humanhuman

TSL 3 BASIC

Gene LINC01564, Length 566 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01564-201ENST00000448327 SACSQ9NZJ4 4579 aa0.69□□□□□ -2.3
LINC01564-201ENST00000448327 PCNX1Q96RV3 2341 aa0.69□□□□□ -2.3
LINC01564-201ENST00000448327 HELZ2Q9BYK8 2649 aaKnown RBP0.68□□□□□ -2.3
LINC01564-201ENST00000448327 SPTBN4Q9H254 2564 aa0.68□□□□□ -2.3
LINC01564-201ENST00000448327 HTTP42858 3142 aa0.68□□□□□ -2.3
LINC01564-201ENST00000448327 DEFB108BQ8NET1 73 aa0.68□□□□□ -2.3
LINC01564-201ENST00000448327 DEFB105AQ8NG35 78 aa0.68□□□□□ -2.3
LINC01564-201ENST00000448327 PRUNE2Q8WUY3 3088 aa0.68□□□□□ -2.3
LINC01564-201ENST00000448327 S4R3F8 94 aa0.68□□□□□ -2.3
LINC01564-201ENST00000448327 GVINP1Q7Z2Y8 2422 aa0.68□□□□□ -2.3
LINC01564-201ENST00000448327 ABCA2Q9BZC7 2435 aa0.68□□□□□ -2.3
LINC01564-201ENST00000448327 WNK2Q9Y3S1 2297 aa0.68□□□□□ -2.3
LINC01564-201ENST00000448327 LAMA2P24043 3122 aaKnown RBP0.68□□□□□ -2.3
LINC01564-201ENST00000448327 KALRNO60229 2985 aa0.68□□□□□ -2.3
LINC01564-201ENST00000448327 AKAP13Q12802 2813 aa0.68□□□□□ -2.3
LINC01564-201ENST00000448327 SMG1Q96Q15 3661 aaKnown RBP0.67□□□□□ -2.3
LINC01564-201ENST00000448327 FRYQ5TBA9 3013 aa0.67□□□□□ -2.3
LINC01564-201ENST00000448327 DEFB136Q30KP8 78 aa0.67□□□□□ -2.3
LINC01564-201ENST00000448327 PRO0255Q9UI72 69 aa0.67□□□□□ -2.3
LINC01564-201ENST00000448327 Q9Y3F1 56 aa0.67□□□□□ -2.3
LINC01564-201ENST00000448327 REV3LO60673 3130 aa0.67□□□□□ -2.3
LINC01564-201ENST00000448327 VPS13BQ7Z7G8 4022 aa0.67□□□□□ -2.3
LINC01564-201ENST00000448327 DNAH7Q8WXX0 4024 aa0.67□□□□□ -2.3
LINC01564-201ENST00000448327 LAMA3Q16787 3333 aa0.67□□□□□ -2.3
LINC01564-201ENST00000448327 PKDREJQ9NTG1 2253 aa0.67□□□□□ -2.3
LINC01564-201ENST00000448327 DNAH17Q9UFH2 4485 aa0.67□□□□□ -2.3
LINC01564-201ENST00000448327 FREM2Q5SZK8 3169 aa0.67□□□□□ -2.3
LINC01564-201ENST00000448327 CMYA5Q8N3K9 4069 aa0.67□□□□□ -2.3
LINC01564-201ENST00000448327 CHD9Q3L8U1 2897 aa0.67□□□□□ -2.3
LINC01564-201ENST00000448327 MEGF8Q7Z7M0 2845 aa0.66□□□□□ -2.3
LINC01564-201ENST00000448327 DNAH2Q9P225 4427 aa0.66□□□□□ -2.3
LINC01564-201ENST00000448327 CSMD3Q7Z407 3707 aa0.66□□□□□ -2.3
LINC01564-201ENST00000448327 U3KQA8 63 aa0.66□□□□□ -2.3
LINC01564-201ENST00000448327 ZNF292O60281 2723 aa0.66□□□□□ -2.3
LINC01564-201ENST00000448327 AKAP6Q13023 2319 aa0.66□□□□□ -2.3
LINC01564-201ENST00000448327 VCANP13611 3396 aa0.66□□□□□ -2.3
LINC01564-201ENST00000448327 DYNC2H1Q8NCM8 4307 aaKnown RBP0.65□□□□□ -2.3
LINC01564-201ENST00000448327 MAP1AP78559 2803 aaPredicted RBP0.65□□□□□ -2.3
LINC01564-201ENST00000448327 UBR5O95071 2799 aaPredicted RBP0.65□□□□□ -2.3
LINC01564-201ENST00000448327 LOC400499M0QZD8 3231 aa0.65□□□□□ -2.31
LINC01564-201ENST00000448327 COL12A1Q99715 3063 aa0.65□□□□□ -2.31
LINC01564-201ENST00000448327 PRLHP81277 87 aa0.65□□□□□ -2.31
LINC01564-201ENST00000448327 LYSTQ99698 3801 aa0.65□□□□□ -2.31
LINC01564-201ENST00000448327 ZNF469Q96JG9 3925 aaPredicted RBP0.65□□□□□ -2.31
LINC01564-201ENST00000448327 DNAH3Q8TD57 4116 aa0.65□□□□□ -2.31
LINC01564-201ENST00000448327 CSMD1Q96PZ7 3565 aa0.65□□□□□ -2.31
LINC01564-201ENST00000448327 LAMA5O15230 3695 aa0.65□□□□□ -2.31
LINC01564-201ENST00000448327 ABCA12Q86UK0 2595 aa0.65□□□□□ -2.31
LINC01564-201ENST00000448327 DNAH5Q8TE73 4624 aa0.65□□□□□ -2.31
LINC01564-201ENST00000448327 LAMA1P25391 3075 aa0.65□□□□□ -2.31
LINC01564-201ENST00000448327 ATMQ13315 3056 aa0.65□□□□□ -2.31
LINC01564-201ENST00000448327 DNAH6Q9C0G6 4158 aa0.64□□□□□ -2.31
LINC01564-201ENST00000448327 POLQO75417 2590 aa0.64□□□□□ -2.31
LINC01564-201ENST00000448327 PRRC2CQ9Y520 2896 aaKnown RBP0.64□□□□□ -2.31
LINC01564-201ENST00000448327 KMT2AQ03164 3969 aa0.64□□□□□ -2.31
LINC01564-201ENST00000448327 NCOR1O75376 2440 aa0.64□□□□□ -2.31
LINC01564-201ENST00000448327 FLGP20930 4061 aaPredicted RBP0.64□□□□□ -2.31
LINC01564-201ENST00000448327 Q5VSD8 79 aa0.64□□□□□ -2.31
LINC01564-201ENST00000448327 TTC28Q96AY4 2481 aa0.64□□□□□ -2.31
LINC01564-201ENST00000448327 DNAH12Q6ZR08 3092 aa0.64□□□□□ -2.31
LINC01564-201ENST00000448327 HECTD4Q9Y4D8 3996 aa0.64□□□□□ -2.31
LINC01564-201ENST00000448327 DMXL2Q8TDJ6 3036 aa0.64□□□□□ -2.31
LINC01564-201ENST00000448327 PDZD2O15018 2839 aa0.64□□□□□ -2.31
LINC01564-201ENST00000448327 ACACAQ13085 2346 aa0.64□□□□□ -2.31
LINC01564-201ENST00000448327 LRBAP50851 2863 aa0.63□□□□□ -2.31
LINC01564-201ENST00000448327 TPRP12270 2363 aaKnown RBP0.63□□□□□ -2.31
LINC01564-201ENST00000448327 DNAH14Q0VDD8 3507 aa0.63□□□□□ -2.31
LINC01564-201ENST00000448327 CELSR3Q9NYQ7 3312 aa0.63□□□□□ -2.31
LINC01564-201ENST00000448327 DNAH10Q8IVF4 4471 aa0.63□□□□□ -2.31
LINC01564-201ENST00000448327 H3BUX3 64 aa0.63□□□□□ -2.31
LINC01564-201ENST00000448327 SPINK1P00995 79 aa0.63□□□□□ -2.31
LINC01564-201ENST00000448327 DEFB133Q30KQ1 61 aa0.63□□□□□ -2.31
LINC01564-201ENST00000448327 NOP10Q9NPE3 64 aaKnown RBP0.63□□□□□ -2.31
LINC01564-201ENST00000448327 APLNQ9ULZ1 77 aa0.63□□□□□ -2.31
LINC01564-201ENST00000448327 HRNRQ86YZ3 2850 aaPredicted RBP0.63□□□□□ -2.31
LINC01564-201ENST00000448327 BRCA2P51587 3418 aa0.63□□□□□ -2.31
LINC01564-201ENST00000448327 TRANK1O15050 2925 aa0.63□□□□□ -2.31
LINC01564-201ENST00000448327 BDP1A6H8Y1 2624 aa0.63□□□□□ -2.31
LINC01564-201ENST00000448327 CUBNO60494 3623 aa0.63□□□□□ -2.31
LINC01564-201ENST00000448327 SPTA1P02549 2419 aa0.63□□□□□ -2.31
LINC01564-201ENST00000448327 EP300Q09472 2414 aaPredicted RBP0.63□□□□□ -2.31
LINC01564-201ENST00000448327 ITPR1Q14643 2758 aa0.62□□□□□ -2.31
LINC01564-201ENST00000448327 DMXL1Q9Y485 3027 aa0.62□□□□□ -2.31
LINC01564-201ENST00000448327 PKHD1L1Q86WI1 4243 aa0.62□□□□□ -2.31
LINC01564-201ENST00000448327 APOBP04114 4563 aaKnown RBP0.62□□□□□ -2.31
LINC01564-201ENST00000448327 HTN1P15515 57 aa0.62□□□□□ -2.31
LINC01564-201ENST00000448327 DEFB124Q8NES8 71 aa0.62□□□□□ -2.31
LINC01564-201ENST00000448327 DCHS2Q6V1P9 2916 aa0.62□□□□□ -2.31
LINC01564-201ENST00000448327 DNAH9Q9NYC9 4486 aa0.62□□□□□ -2.31
LINC01564-201ENST00000448327 PLECQ15149 4684 aaKnown RBP0.62□□□□□ -2.31
LINC01564-201ENST00000448327 FAT3Q8TDW7 4589 aa0.62□□□□□ -2.31
LINC01564-201ENST00000448327 NF1P21359 2839 aa0.61□□□□□ -2.31
LINC01564-201ENST00000448327 NCOR2Q9Y618 2525 aa0.61□□□□□ -2.31
LINC01564-201ENST00000448327 TENM3Q9P273 2699 aa0.61□□□□□ -2.31
LINC01564-201ENST00000448327 A0A096LPF7 62 aa0.61□□□□□ -2.31
LINC01564-201ENST00000448327 MUC3AQ02505 3323 aa0.61□□□□□ -2.31
LINC01564-201ENST00000448327 VPS13CQ709C8 3753 aa0.6□□□□□ -2.31
LINC01564-201ENST00000448327 NIPBLQ6KC79 2804 aaeCLIP0.6□□□□□ -2.31
LINC01564-201ENST00000448327 A0A096LNI7 61 aa0.6□□□□□ -2.31
LINC01564-201ENST00000448327 FAT2Q9NYQ8 4349 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms