RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 PDE6GP18545 87 aa4.27□□□□□ -1.73
AC004540.1-206ENST00000448056 RETNLBQ9BQ08 111 aa4.27□□□□□ -1.73
AC004540.1-206ENST00000448056 A0A1B0GV90 55 aa4.26□□□□□ -1.73
AC004540.1-206ENST00000448056 PCP4P48539 62 aa4.26□□□□□ -1.73
AC004540.1-206ENST00000448056 PRR4Q16378 134 aa4.26□□□□□ -1.73
AC004540.1-206ENST00000448056 Q6ZQT0 140 aa4.26□□□□□ -1.73
AC004540.1-206ENST00000448056 C14orf132Q9NPU4 83 aa4.26□□□□□ -1.73
AC004540.1-206ENST00000448056 A0A087WSZ3 146 aa4.25□□□□□ -1.73
AC004540.1-206ENST00000448056 ASB16-AS1Q495Z4 193 aa4.25□□□□□ -1.73
AC004540.1-206ENST00000448056 C1orf195Q5TG92 126 aa4.25□□□□□ -1.73
AC004540.1-206ENST00000448056 FP248Q71RG6 208 aaPredicted RBP4.24□□□□□ -1.73
AC004540.1-206ENST00000448056 VPS25Q9BRG1 176 aa4.24□□□□□ -1.73
AC004540.1-206ENST00000448056 IGLV7-46A0A075B6I9 117 aa4.23□□□□□ -1.73
AC004540.1-206ENST00000448056 A0A1B0GW54 56 aa4.23□□□□□ -1.73
AC004540.1-206ENST00000448056 SS18L2Q9UHA2 77 aa4.23□□□□□ -1.73
AC004540.1-206ENST00000448056 HMCN2Q8NDA2 5059 aa4.22□□□□□ -1.73
AC004540.1-206ENST00000448056 ETDBQ3ZM63 59 aa4.22□□□□□ -1.73
AC004540.1-206ENST00000448056 Q96NJ1 140 aa4.2□□□□□ -1.74
AC004540.1-206ENST00000448056 LINC00472Q9H8W2 130 aa4.19□□□□□ -1.74
AC004540.1-206ENST00000448056 TPRXLQ17RH7 258 aa4.18□□□□□ -1.74
AC004540.1-206ENST00000448056 KRTAP13-3Q3SY46 172 aa4.18□□□□□ -1.74
AC004540.1-206ENST00000448056 NREPQ16612 68 aa4.17□□□□□ -1.74
AC004540.1-206ENST00000448056 DEFB116Q30KQ4 102 aa4.17□□□□□ -1.74
AC004540.1-206ENST00000448056 LPAP08519 4548 aa4.17□□□□□ -1.74
AC004540.1-206ENST00000448056 IGKV4-1P06312 121 aa4.16□□□□□ -1.74
AC004540.1-206ENST00000448056 UBR4Q5T4S7 5183 aa4.15□□□□□ -1.75
AC004540.1-206ENST00000448056 LRP2P98164 4655 aa4.14□□□□□ -1.75
AC004540.1-206ENST00000448056 C9orf92A6NGG3 77 aa4.14□□□□□ -1.75
AC004540.1-206ENST00000448056 J3KT08 172 aa4.14□□□□□ -1.75
AC004540.1-206ENST00000448056 LINC00846Q9NV44 126 aa4.14□□□□□ -1.75
AC004540.1-206ENST00000448056 Q6ZVQ6 151 aa4.13□□□□□ -1.75
AC004540.1-206ENST00000448056 SIGMAR1Q99720 223 aa4.13□□□□□ -1.75
AC004540.1-206ENST00000448056 A0A0A0MQY5 61 aa4.12□□□□□ -1.75
AC004540.1-206ENST00000448056 UBL5Q9BZL1 73 aa4.12□□□□□ -1.75
AC004540.1-206ENST00000448056 ACYP1P07311 99 aa4.11□□□□□ -1.75
AC004540.1-206ENST00000448056 IGHV6-1A0A0B4J1U7 121 aa4.1□□□□□ -1.75
AC004540.1-206ENST00000448056 FAM240AA0A1B0GVK7 77 aa4.1□□□□□ -1.75
AC004540.1-206ENST00000448056 A0A1B0GVX0 72 aa4.1□□□□□ -1.75
AC004540.1-206ENST00000448056 A8MWP4 228 aa4.1□□□□□ -1.75
AC004540.1-206ENST00000448056 BPY2O14599 106 aa4.1□□□□□ -1.75
AC004540.1-206ENST00000448056 NDUFB1O75438 58 aa4.1□□□□□ -1.75
AC004540.1-206ENST00000448056 DSCR10P59022 87 aa4.1□□□□□ -1.75
AC004540.1-206ENST00000448056 LINC00313P59037 77 aa4.1□□□□□ -1.75
AC004540.1-206ENST00000448056 NOTCH2NLQ7Z3S9 236 aa4.1□□□□□ -1.75
AC004540.1-206ENST00000448056 IGKV3D-7A0A0C4DH55 119 aa4.09□□□□□ -1.75
AC004540.1-206ENST00000448056 PRR15Q8IV56 129 aa4.09□□□□□ -1.75
AC004540.1-206ENST00000448056 C8orf87E5RJ46 101 aa4.07□□□□□ -1.76
AC004540.1-206ENST00000448056 KRTAP16-1A8MUX0 517 aa4.06□□□□□ -1.76
AC004540.1-206ENST00000448056 J3QR89 54 aa4.06□□□□□ -1.76
AC004540.1-206ENST00000448056 K7EQZ3 153 aa4.06□□□□□ -1.76
AC004540.1-206ENST00000448056 C8orf17Q9NRJ1 99 aa4.06□□□□□ -1.76
AC004540.1-206ENST00000448056 SEC61BP60468 96 aaKnown RBP4.05□□□□□ -1.76
AC004540.1-206ENST00000448056 RPL37P61927 97 aaKnown RBP4.05□□□□□ -1.76
AC004540.1-206ENST00000448056 CXCL6P80162 114 aa4.05□□□□□ -1.76
AC004540.1-206ENST00000448056 Q75L30 129 aa4.05□□□□□ -1.76
AC004540.1-206ENST00000448056 Q8N9L7 120 aa4.05□□□□□ -1.76
AC004540.1-206ENST00000448056 C20orf166-AS1Q96NR2 134 aa4.05□□□□□ -1.76
AC004540.1-206ENST00000448056 A8MUU9 505 aa4.04□□□□□ -1.76
AC004540.1-206ENST00000448056 MPLKIPQ8TAP9 179 aa4.04□□□□□ -1.76
AC004540.1-206ENST00000448056 PCOTHQ58A44 107 aa4.03□□□□□ -1.76
AC004540.1-206ENST00000448056 RNF213Q63HN8 5207 aa4.03□□□□□ -1.76
AC004540.1-206ENST00000448056 MMP24-AS1A0A0U1RRL7 71 aa4.02□□□□□ -1.77
AC004540.1-206ENST00000448056 ATP11AUNQ6ZP68 121 aa4.02□□□□□ -1.77
AC004540.1-206ENST00000448056 LINC00643Q86TS7 51 aa4.02□□□□□ -1.77
AC004540.1-206ENST00000448056 hDV103S1A0JD37 113 aa4.01□□□□□ -1.77
AC004540.1-206ENST00000448056 ATP5EP2Q5VTU8 51 aa4.01□□□□□ -1.77
AC004540.1-206ENST00000448056 Q8N9P0 234 aaPredicted RBP4.01□□□□□ -1.77
AC004540.1-206ENST00000448056 MUC17Q685J3 4493 aa4□□□□□ -1.77
AC004540.1-206ENST00000448056 K7ERU9 68 aa4□□□□□ -1.77
AC004540.1-206ENST00000448056 TMEM254Q8TBM7 123 aa4□□□□□ -1.77
AC004540.1-206ENST00000448056 MRPL34Q9BQ48 92 aaKnown RBP4□□□□□ -1.77
AC004540.1-206ENST00000448056 HCG22E2RYF7 251 aa3.99□□□□□ -1.77
AC004540.1-206ENST00000448056 CASC2Q6XLA1 102 aa3.99□□□□□ -1.77
AC004540.1-206ENST00000448056 WFDC13Q8IUB5 93 aa3.99□□□□□ -1.77
AC004540.1-206ENST00000448056 KRTAP4-1Q9BYQ7 146 aa3.99□□□□□ -1.77
AC004540.1-206ENST00000448056 MUC2Q02817 5179 aa3.99□□□□□ -1.77
AC004540.1-206ENST00000448056 HIST1H4AP62805 103 aaKnown RBP3.97□□□□□ -1.77
AC004540.1-206ENST00000448056 ZCCHC13Q8WW36 166 aaKnown RBP3.96□□□□□ -1.78
AC004540.1-206ENST00000448056 NDUFS5O43920 106 aa3.95□□□□□ -1.78
AC004540.1-206ENST00000448056 A0A087WVE0 104 aa3.93□□□□□ -1.78
AC004540.1-206ENST00000448056 IGKV2-30P06310 120 aa3.92□□□□□ -1.78
AC004540.1-206ENST00000448056 MT-ATP8P03928 68 aa3.91□□□□□ -1.78
AC004540.1-206ENST00000448056 Q5W150 140 aa3.91□□□□□ -1.78
AC004540.1-206ENST00000448056 TP53AIP1Q9HCN2 124 aa3.91□□□□□ -1.78
AC004540.1-206ENST00000448056 IMUPQ9GZP8 106 aa3.9□□□□□ -1.79
AC004540.1-206ENST00000448056 SPINK7P58062 85 aa3.89□□□□□ -1.79
AC004540.1-206ENST00000448056 A0A0U1RQV1 116 aa3.87□□□□□ -1.79
AC004540.1-206ENST00000448056 UQCRQO14949 82 aa3.86□□□□□ -1.79
AC004540.1-206ENST00000448056 KRTAP19-2Q3LHN2 52 aa3.86□□□□□ -1.79
AC004540.1-206ENST00000448056 SCGB1A1P11684 91 aa3.85□□□□□ -1.79
AC004540.1-206ENST00000448056 HRES1P13985 223 aa3.85□□□□□ -1.79
AC004540.1-206ENST00000448056 IGKV2D-30A0A075B6S6 120 aa3.84□□□□□ -1.79
AC004540.1-206ENST00000448056 OCR1Q9BZK8 76 aa3.84□□□□□ -1.79
AC004540.1-206ENST00000448056 FAT4Q6V0I7 4981 aa3.83□□□□□ -1.8
AC004540.1-206ENST00000448056 TRAV22A0A0B4J277 110 aa3.83□□□□□ -1.8
AC004540.1-206ENST00000448056 C7orf65Q6ZTY9 151 aa3.83□□□□□ -1.8
AC004540.1-206ENST00000448056 RBM12B-AS1Q9P1G2 102 aa3.82□□□□□ -1.8
AC004540.1-206ENST00000448056 FAM236AA0A1B0GUQ0 79 aa3.81□□□□□ -1.8
AC004540.1-206ENST00000448056 FAM236BA0A1B0GV22 79 aa3.81□□□□□ -1.8
AC004540.1-206ENST00000448056 LCE1AQ5T7P2 110 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms