RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 LINC00304Q8N9R0 145 aa2.64□□□□□ -1.99
SDCBP-205ENST00000447267 TRAV23DV6A0A075B6W5 121 aa2.63□□□□□ -1.99
SDCBP-205ENST00000447267 ANGP03950 147 aaKnown RBP2.63□□□□□ -1.99
SDCBP-205ENST00000447267 RPL28P46779 137 aaKnown RBP2.63□□□□□ -1.99
SDCBP-205ENST00000447267 SYCNQ0VAF6 134 aa2.63□□□□□ -1.99
SDCBP-205ENST00000447267 LINC00269Q8N2A0 174 aa2.63□□□□□ -1.99
SDCBP-205ENST00000447267 CLEC2BQ92478 149 aa2.63□□□□□ -1.99
SDCBP-205ENST00000447267 PHLDA3Q9Y5J5 127 aa2.63□□□□□ -1.99
SDCBP-205ENST00000447267 ZNF706Q9Y5V0 76 aaPredicted RBP2.63□□□□□ -1.99
SDCBP-205ENST00000447267 SNURFQ9Y675 71 aa2.63□□□□□ -1.99
SDCBP-205ENST00000447267 SH2D1AO60880 128 aa2.62□□□□□ -1.99
SDCBP-205ENST00000447267 DNAL4O96015 105 aa2.62□□□□□ -1.99
SDCBP-205ENST00000447267 ARMS2P0C7Q2 107 aa2.62□□□□□ -1.99
SDCBP-205ENST00000447267 S100A4P26447 101 aaKnown RBP2.62□□□□□ -1.99
SDCBP-205ENST00000447267 KIAA0087Q14695 138 aa2.62□□□□□ -1.99
SDCBP-205ENST00000447267 HIGD2BQ4VC39 106 aa2.62□□□□□ -1.99
SDCBP-205ENST00000447267 C6orf99Q4VX62 202 aa2.62□□□□□ -1.99
SDCBP-205ENST00000447267 KRTAP13-2Q52LG2 175 aa2.62□□□□□ -1.99
SDCBP-205ENST00000447267 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
SDCBP-205ENST00000447267 TRAV22A0A0B4J277 110 aa2.61□□□□□ -1.99
SDCBP-205ENST00000447267 TRBV10-3A0A0K0K1G6 114 aa2.61□□□□□ -1.99
SDCBP-205ENST00000447267 hDV103S1A0JD37 113 aa2.61□□□□□ -1.99
SDCBP-205ENST00000447267 M0R3E3 92 aa2.61□□□□□ -1.99
SDCBP-205ENST00000447267 PATE2Q6UY27 113 aa2.61□□□□□ -1.99
SDCBP-205ENST00000447267 KRTAP5-5Q701N2 237 aaPredicted RBP2.61□□□□□ -1.99
SDCBP-205ENST00000447267 SPTSSBQ8NFR3 76 aa2.61□□□□□ -1.99
SDCBP-205ENST00000447267 TMEM141Q96I45 108 aa2.61□□□□□ -1.99
SDCBP-205ENST00000447267 NDUFA12Q9UI09 145 aa2.61□□□□□ -1.99
SDCBP-205ENST00000447267 IGHV3OR16-9A0A0B4J2B5 98 aa2.6□□□□□ -1.99
SDCBP-205ENST00000447267 A8MU10 97 aa2.6□□□□□ -1.99
SDCBP-205ENST00000447267 I3L3M4 83 aa2.6□□□□□ -1.99
SDCBP-205ENST00000447267 PSPHP1O15172 72 aa2.6□□□□□ -1.99
SDCBP-205ENST00000447267 GNRH2O43555 120 aa2.6□□□□□ -1.99
SDCBP-205ENST00000447267 KRTAP5-10Q6L8G5 202 aa2.6□□□□□ -1.99
SDCBP-205ENST00000447267 MUSTN1Q8IVN3 82 aa2.6□□□□□ -1.99
SDCBP-205ENST00000447267 Q8N377 158 aa2.6□□□□□ -1.99
SDCBP-205ENST00000447267 C14orf178Q8N769 122 aaPredicted RBP2.6□□□□□ -1.99
SDCBP-205ENST00000447267 IGKV2-40A0A087WW87 121 aaPredicted RBP2.59□□□□□ -1.99
SDCBP-205ENST00000447267 IGHV6-1A0A0B4J1U7 121 aa2.59□□□□□ -1.99
SDCBP-205ENST00000447267 TRBV6-1A0A0K0K1D8 114 aa2.59□□□□□ -1.99
SDCBP-205ENST00000447267 ERC2-IT1O76042 136 aa2.59□□□□□ -1.99
SDCBP-205ENST00000447267 IGKV2D-40P01614 121 aaPredicted RBP2.59□□□□□ -1.99
SDCBP-205ENST00000447267 BAALC-AS2P0C853 105 aa2.59□□□□□ -1.99
SDCBP-205ENST00000447267 SPRR2DP22532 72 aa2.59□□□□□ -1.99
SDCBP-205ENST00000447267 C9orf116Q5BN46 136 aaPredicted RBP2.59□□□□□ -1.99
SDCBP-205ENST00000447267 Q5VV11 94 aa2.59□□□□□ -1.99
SDCBP-205ENST00000447267 C22orf24Q9Y442 160 aa2.59□□□□□ -1.99
SDCBP-205ENST00000447267 TRBV7-4A0A0J9YYF1 115 aa2.58□□□□□ -2
SDCBP-205ENST00000447267 SDHAF1A6NFY7 115 aa2.58□□□□□ -2
SDCBP-205ENST00000447267 IGIPA6NJ69 53 aa2.58□□□□□ -2
SDCBP-205ENST00000447267 C11orf86A6NJI1 115 aa2.58□□□□□ -2
SDCBP-205ENST00000447267 HCG22E2RYF7 251 aa2.58□□□□□ -2
SDCBP-205ENST00000447267 COX7A2P2O60397 106 aa2.58□□□□□ -2
SDCBP-205ENST00000447267 SPANXN1Q5VSR9 72 aa2.58□□□□□ -2
SDCBP-205ENST00000447267 Q86TA4 180 aa2.58□□□□□ -2
SDCBP-205ENST00000447267 FAM167A-AS1Q96KT0 104 aa2.58□□□□□ -2
SDCBP-205ENST00000447267 AMELXQ99217 191 aa2.58□□□□□ -2
SDCBP-205ENST00000447267 GVQW2A0A096LPI5 108 aaPredicted RBP2.57□□□□□ -2
SDCBP-205ENST00000447267 TRBV6-8A0A0A6YYG3 113 aa2.57□□□□□ -2
SDCBP-205ENST00000447267 TSPEAR-AS2P59090 65 aa2.57□□□□□ -2
SDCBP-205ENST00000447267 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
SDCBP-205ENST00000447267 CYP4F30PQ9H0H9 118 aa2.57□□□□□ -2
SDCBP-205ENST00000447267 CHKB-CPT1BH3BT56 60 aa2.56□□□□□ -2
SDCBP-205ENST00000447267 REG3AQ06141 175 aa2.56□□□□□ -2
SDCBP-205ENST00000447267 LYZL1Q6UWQ5 148 aa2.56□□□□□ -2
SDCBP-205ENST00000447267 TMEM254Q8TBM7 123 aa2.56□□□□□ -2
SDCBP-205ENST00000447267 CHCHD10Q8WYQ3 142 aaPredicted RBP2.56□□□□□ -2
SDCBP-205ENST00000447267 OBSCN-AS1Q96MR7 158 aa2.56□□□□□ -2
SDCBP-205ENST00000447267 SCGB3A1Q96QR1 104 aa2.56□□□□□ -2
SDCBP-205ENST00000447267 LEPROTO15243 131 aa2.55□□□□□ -2
SDCBP-205ENST00000447267 C20orf203Q8NBC4 194 aa2.55□□□□□ -2
SDCBP-205ENST00000447267 SPRR2FQ96RM1 72 aa2.55□□□□□ -2
SDCBP-205ENST00000447267 C14orf132Q9NPU4 83 aa2.55□□□□□ -2
SDCBP-205ENST00000447267 CDC42SE1Q9NRR8 79 aa2.55□□□□□ -2
SDCBP-205ENST00000447267 IGLV4-69A0A075B6H9 119 aa2.54□□□□□ -2
SDCBP-205ENST00000447267 MOBPQ13875 183 aa2.54□□□□□ -2
SDCBP-205ENST00000447267 NREPQ16612 68 aa2.54□□□□□ -2
SDCBP-205ENST00000447267 NTM-AS1Q6ZSK4 140 aa2.54□□□□□ -2
SDCBP-205ENST00000447267 LIMD2Q9BT23 127 aa2.54□□□□□ -2
SDCBP-205ENST00000447267 TMEM14CQ9P0S9 112 aa2.54□□□□□ -2
SDCBP-205ENST00000447267 A0A0J9YXY3 114 aa2.53□□□□□ -2
SDCBP-205ENST00000447267 ZNF861PO60384 105 aa2.53□□□□□ -2
SDCBP-205ENST00000447267 RNASE3P12724 160 aaKnown RBP2.53□□□□□ -2
SDCBP-205ENST00000447267 LINC00242Q5T6M2 205 aa2.53□□□□□ -2
SDCBP-205ENST00000447267 C10orf113Q5VZT2 155 aa2.53□□□□□ -2
SDCBP-205ENST00000447267 C1orf64Q8NEQ6 169 aa2.53□□□□□ -2
SDCBP-205ENST00000447267 IGLV4-60A0A075B6I1 120 aa2.52□□□□□ -2.01
SDCBP-205ENST00000447267 FAM168BA1KXE4 195 aa2.52□□□□□ -2.01
SDCBP-205ENST00000447267 A6NED7 52 aa2.52□□□□□ -2.01
SDCBP-205ENST00000447267 PRR15LQ9BU68 103 aa2.52□□□□□ -2.01
SDCBP-205ENST00000447267 SMIM2Q9BVW6 85 aa2.52□□□□□ -2.01
SDCBP-205ENST00000447267 UBL5Q9BZL1 73 aa2.52□□□□□ -2.01
SDCBP-205ENST00000447267 TRAV21A0A0B4J279 112 aa2.51□□□□□ -2.01
SDCBP-205ENST00000447267 TRBV10-1A0A0K0K1A3 114 aa2.51□□□□□ -2.01
SDCBP-205ENST00000447267 CRIP1P50238 77 aa2.51□□□□□ -2.01
SDCBP-205ENST00000447267 PDE6HQ13956 83 aa2.51□□□□□ -2.01
SDCBP-205ENST00000447267 C2orf66Q6UXQ4 117 aa2.51□□□□□ -2.01
SDCBP-205ENST00000447267 CASC2Q6XLA1 102 aa2.51□□□□□ -2.01
SDCBP-205ENST00000447267 CNFNQ9BYD5 112 aa2.51□□□□□ -2.01
SDCBP-205ENST00000447267 SND1-IT1Q9HBX3 110 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms