RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	CIRBP-AS1	Q8TBR5	109 aa		7.59	□□□□□ -1.19
DDR1-238	ENST00000446312		H3BPC8	53 aa		7.59	□□□□□ -1.19
DDR1-238	ENST00000446312	IGLV7-46	A0A075B6I9	117 aa		7.57	□□□□□ -1.2
DDR1-238	ENST00000446312	C9orf163	Q8N9P6	203 aa		7.57	□□□□□ -1.2
DDR1-238	ENST00000446312	C1orf134	Q5TEV5	83 aa		7.56	□□□□□ -1.2
DDR1-238	ENST00000446312	APLN	Q9ULZ1	77 aa		7.56	□□□□□ -1.2
DDR1-238	ENST00000446312	NBDY	A0A0U1RRE5	68 aa		7.54	□□□□□ -1.2
DDR1-238	ENST00000446312	C8orf17	Q9NRJ1	99 aa		7.54	□□□□□ -1.2
DDR1-238	ENST00000446312	PSORS1C2	Q9UIG4	136 aa		7.54	□□□□□ -1.2
DDR1-238	ENST00000446312	IGLV8-61	A0A075B6I0	122 aa		7.52	□□□□□ -1.21
DDR1-238	ENST00000446312	KMT2A	Q03164	3969 aa		7.51	□□□□□ -1.21
DDR1-238	ENST00000446312	HRES1	P13985	223 aa		7.5	□□□□□ -1.21
DDR1-238	ENST00000446312	C14orf177	Q52M58	125 aa		7.5	□□□□□ -1.21
DDR1-238	ENST00000446312		Q6ZR54	194 aa		7.49	□□□□□ -1.21
DDR1-238	ENST00000446312		Q96NJ1	140 aa		7.49	□□□□□ -1.21
DDR1-238	ENST00000446312		Q5W150	140 aa		7.48	□□□□□ -1.21
DDR1-238	ENST00000446312	PLAC8	Q9NZF1	115 aa		7.47	□□□□□ -1.21
DDR1-238	ENST00000446312	STARD9	Q9P2P6	4700 aa		7.47	□□□□□ -1.21
DDR1-238	ENST00000446312	RTL8C	O15255	209 aa		7.46	□□□□□ -1.21
DDR1-238	ENST00000446312		A0A1B0GVX0	72 aa		7.45	□□□□□ -1.22
DDR1-238	ENST00000446312		A0A1B0GU69	56 aa		7.44	□□□□□ -1.22
DDR1-238	ENST00000446312	DNAH8	Q96JB1	4490 aa		7.44	□□□□□ -1.22
DDR1-238	ENST00000446312	MRPL34	Q9BQ48	92 aa	Known RBP	7.44	□□□□□ -1.22
DDR1-238	ENST00000446312		A0A087WTM6	91 aa		7.43	□□□□□ -1.22
DDR1-238	ENST00000446312	SPRR1B	P22528	89 aa		7.43	□□□□□ -1.22
DDR1-238	ENST00000446312	WWC2-AS2	Q96NR7	200 aa		7.42	□□□□□ -1.22
DDR1-238	ENST00000446312	SPACA4	Q8TDM5	124 aa		7.42	□□□□□ -1.22
DDR1-238	ENST00000446312	LY6G6C	O95867	125 aa		7.42	□□□□□ -1.22
DDR1-238	ENST00000446312	MIR22HG	Q0VDD5	57 aa		7.41	□□□□□ -1.22
DDR1-238	ENST00000446312	KRTAP13-1	Q8IUC0	172 aa		7.41	□□□□□ -1.22
DDR1-238	ENST00000446312	IGLV5-52	A0A0A0MRZ9	124 aa		7.4	□□□□□ -1.22
DDR1-238	ENST00000446312		Q6ZRN7	208 aa	Predicted RBP	7.4	□□□□□ -1.22
DDR1-238	ENST00000446312	PRKDC	P78527	4128 aa	Known RBP	7.4	□□□□□ -1.22
DDR1-238	ENST00000446312	FLG2	Q5D862	2391 aa	Predicted RBP	7.39	□□□□□ -1.23
DDR1-238	ENST00000446312	DMBT1	Q9UGM3	2413 aa	Predicted RBP	7.39	□□□□□ -1.23
DDR1-238	ENST00000446312	SPINK1	P00995	79 aa		7.39	□□□□□ -1.23
DDR1-238	ENST00000446312	DNAH17	Q9UFH2	4485 aa		7.37	□□□□□ -1.23
DDR1-238	ENST00000446312	ASB16-AS1	Q495Z4	193 aa		7.37	□□□□□ -1.23
DDR1-238	ENST00000446312	IGKV2D-30	A0A075B6S6	120 aa		7.37	□□□□□ -1.23
DDR1-238	ENST00000446312	IGKV2-30	P06310	120 aa		7.37	□□□□□ -1.23
DDR1-238	ENST00000446312	ZNF861P	O60384	105 aa		7.36	□□□□□ -1.23
DDR1-238	ENST00000446312	DYNC2H1	Q8NCM8	4307 aa	Known RBP	7.36	□□□□□ -1.23
DDR1-238	ENST00000446312	DNAH11	Q96DT5	4516 aa		7.35	□□□□□ -1.23
DDR1-238	ENST00000446312	DNAH6	Q9C0G6	4158 aa		7.35	□□□□□ -1.23
DDR1-238	ENST00000446312	UQCR11	O14957	56 aa		7.35	□□□□□ -1.23
DDR1-238	ENST00000446312		A0A0A0MQY5	61 aa		7.35	□□□□□ -1.23
DDR1-238	ENST00000446312	ROMO1	P60602	79 aa		7.35	□□□□□ -1.23
DDR1-238	ENST00000446312	TP53AIP1	Q9HCN2	124 aa		7.33	□□□□□ -1.24
DDR1-238	ENST00000446312		J3QL48	77 aa		7.33	□□□□□ -1.24
DDR1-238	ENST00000446312	DNAH2	Q9P225	4427 aa		7.32	□□□□□ -1.24
DDR1-238	ENST00000446312	SPATA8	Q6RVD6	105 aa		7.31	□□□□□ -1.24
DDR1-238	ENST00000446312	VPS13D	Q5THJ4	4388 aa		7.3	□□□□□ -1.24
DDR1-238	ENST00000446312	NUPR2	A6NF83	97 aa		7.3	□□□□□ -1.24
DDR1-238	ENST00000446312	HECTD4	Q9Y4D8	3996 aa		7.3	□□□□□ -1.24
DDR1-238	ENST00000446312	ACYP2	P14621	99 aa		7.3	□□□□□ -1.24
DDR1-238	ENST00000446312	KRTAP10-2	P60368	255 aa		7.29	□□□□□ -1.24
DDR1-238	ENST00000446312	IGLV7-43	P04211	117 aa		7.27	□□□□□ -1.24
DDR1-238	ENST00000446312	DNHD1	Q96M86	4753 aa		7.25	□□□□□ -1.25
DDR1-238	ENST00000446312	LINC00483	Q53H64	154 aa		7.25	□□□□□ -1.25
DDR1-238	ENST00000446312		Q8N1X5	172 aa		7.24	□□□□□ -1.25
DDR1-238	ENST00000446312	CRIPT	Q9P021	101 aa		7.23	□□□□□ -1.25
DDR1-238	ENST00000446312	LRP1B	Q9NZR2	4599 aa		7.23	□□□□□ -1.25
DDR1-238	ENST00000446312	KRTAP25-1	Q3LHN0	102 aa		7.18	□□□□□ -1.26
DDR1-238	ENST00000446312	KRTAP13-2	Q52LG2	175 aa		7.18	□□□□□ -1.26
DDR1-238	ENST00000446312	SMR3B	P02814	79 aa	Predicted RBP	7.16	□□□□□ -1.26
DDR1-238	ENST00000446312	KRTAP10-1	P60331	282 aa		7.14	□□□□□ -1.27
DDR1-238	ENST00000446312	C9orf92	A6NGG3	77 aa		7.14	□□□□□ -1.27
DDR1-238	ENST00000446312		P0C880	135 aa		7.12	□□□□□ -1.27
DDR1-238	ENST00000446312	SPINT4	Q6UDR6	99 aa		7.12	□□□□□ -1.27
DDR1-238	ENST00000446312	KRTAP13-3	Q3SY46	172 aa		7.11	□□□□□ -1.27
DDR1-238	ENST00000446312	SSBP3-AS1	Q7Z2R9	100 aa		7.11	□□□□□ -1.27
DDR1-238	ENST00000446312	ALMS1	Q8TCU4	4167 aa		7.11	□□□□□ -1.27
DDR1-238	ENST00000446312		A8MUU9	505 aa		7.1	□□□□□ -1.27
DDR1-238	ENST00000446312	FAM229A	H3BQW9	127 aa		7.1	□□□□□ -1.27
DDR1-238	ENST00000446312	HYDIN	Q4G0P3	5121 aa		7.09	□□□□□ -1.27
DDR1-238	ENST00000446312	DNAH5	Q8TE73	4624 aa		7.09	□□□□□ -1.27
DDR1-238	ENST00000446312	DMAC1	Q96GE9	116 aa		7.07	□□□□□ -1.28
DDR1-238	ENST00000446312	NDUFAF8	A1L188	74 aa		7.06	□□□□□ -1.28
DDR1-238	ENST00000446312	VPS13B	Q7Z7G8	4022 aa		7.06	□□□□□ -1.28
DDR1-238	ENST00000446312	TYMSOS	Q8TAI1	123 aa		7.06	□□□□□ -1.28
DDR1-238	ENST00000446312	FAT2	Q9NYQ8	4349 aa		7.05	□□□□□ -1.28
DDR1-238	ENST00000446312	FAT1	Q14517	4588 aa		7.03	□□□□□ -1.28
DDR1-238	ENST00000446312	KRTAP16-1	A8MUX0	517 aa		7.02	□□□□□ -1.29
DDR1-238	ENST00000446312	PKHD1	P08F94	4074 aa		7.01	□□□□□ -1.29
DDR1-238	ENST00000446312	LINC00304	Q8N9R0	145 aa		6.99	□□□□□ -1.29
DDR1-238	ENST00000446312	KRTAP1-4	P0C5Y4	121 aa		6.96	□□□□□ -1.3
DDR1-238	ENST00000446312	C20orf166-AS1	Q96NR2	134 aa		6.92	□□□□□ -1.3
DDR1-238	ENST00000446312		K7ERS5	55 aa		6.91	□□□□□ -1.3
DDR1-238	ENST00000446312	MYCBP2	O75592	4640 aa		6.91	□□□□□ -1.3
DDR1-238	ENST00000446312	PKD1	P98161	4303 aa		6.89	□□□□□ -1.31
DDR1-238	ENST00000446312		H0YAA0	97 aa		6.84	□□□□□ -1.31
DDR1-238	ENST00000446312		Q6ZSA8	131 aa		6.82	□□□□□ -1.32
DDR1-238	ENST00000446312		A0A0D9SG42	100 aa		6.8	□□□□□ -1.32
DDR1-238	ENST00000446312		A0A1B0GU33	70 aa		6.8	□□□□□ -1.32
DDR1-238	ENST00000446312	LUZP6	Q538Z0	58 aa		6.78	□□□□□ -1.32
DDR1-238	ENST00000446312	DYNC1H1	Q14204	4646 aa	Known RBP	6.76	□□□□□ -1.33
DDR1-238	ENST00000446312	LRP1	Q07954	4544 aa	Known RBP	6.76	□□□□□ -1.33
DDR1-238	ENST00000446312	KRTAP3-1	Q9BYR8	98 aa		6.75	□□□□□ -1.33
DDR1-238	ENST00000446312	C10orf95	Q9H7T3	257 aa		6.69	□□□□□ -1.34
DDR1-238	ENST00000446312	SACS	Q9NZJ4	4579 aa		6.67	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 79 ms