RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 SPINK6Q6UWN8 80 aa10.06□□□□□ -0.8
LAPTM4B-201ENST00000445593 FAT2Q9NYQ8 4349 aa10.05□□□□□ -0.8
LAPTM4B-201ENST00000445593 LINC00483Q53H64 154 aa10.04□□□□□ -0.8
LAPTM4B-201ENST00000445593 ALMS1Q8TCU4 4167 aa10.03□□□□□ -0.8
LAPTM4B-201ENST00000445593 CASC2Q6XLA1 102 aa10.03□□□□□ -0.8
LAPTM4B-201ENST00000445593 LCA10Q71F78 164 aa10.03□□□□□ -0.8
LAPTM4B-201ENST00000445593 PKHD1P08F94 4074 aa10.03□□□□□ -0.8
LAPTM4B-201ENST00000445593 A8MWP4 228 aa10.02□□□□□ -0.81
LAPTM4B-201ENST00000445593 PKD1P98161 4303 aa10□□□□□ -0.81
LAPTM4B-201ENST00000445593 IGHV6-1A0A0B4J1U7 121 aa10□□□□□ -0.81
LAPTM4B-201ENST00000445593 Q96NJ1 140 aa9.97□□□□□ -0.81
LAPTM4B-201ENST00000445593 NDUFB1O75438 58 aa9.96□□□□□ -0.81
LAPTM4B-201ENST00000445593 ADM2Q7Z4H4 148 aa9.96□□□□□ -0.82
LAPTM4B-201ENST00000445593 SACSQ9NZJ4 4579 aa9.95□□□□□ -0.82
LAPTM4B-201ENST00000445593 A0A087X002 238 aa9.95□□□□□ -0.82
LAPTM4B-201ENST00000445593 VPS13BQ7Z7G8 4022 aa9.94□□□□□ -0.82
LAPTM4B-201ENST00000445593 KRTAP21-3Q3LHN1 58 aa9.93□□□□□ -0.82
LAPTM4B-201ENST00000445593 KRTAP29-1A8MX34 341 aaPredicted RBP9.93□□□□□ -0.82
LAPTM4B-201ENST00000445593 NDUFS5O43920 106 aa9.93□□□□□ -0.82
LAPTM4B-201ENST00000445593 LINC00208Q96KT6 92 aa9.93□□□□□ -0.82
LAPTM4B-201ENST00000445593 CDK2AP2O75956 126 aa9.93□□□□□ -0.82
LAPTM4B-201ENST00000445593 MMP24-AS1A0A0U1RRL7 71 aa9.92□□□□□ -0.82
LAPTM4B-201ENST00000445593 C7orf65Q6ZTY9 151 aa9.92□□□□□ -0.82
LAPTM4B-201ENST00000445593 NOTCH2NLQ7Z3S9 236 aa9.91□□□□□ -0.82
LAPTM4B-201ENST00000445593 PRR26Q8N8Z3 221 aa9.91□□□□□ -0.82
LAPTM4B-201ENST00000445593 A6NN06 94 aa9.9□□□□□ -0.82
LAPTM4B-201ENST00000445593 SMR3BP02814 79 aaPredicted RBP9.9□□□□□ -0.82
LAPTM4B-201ENST00000445593 ATP11AUNQ6ZP68 121 aa9.89□□□□□ -0.83
LAPTM4B-201ENST00000445593 Q6ZSA8 131 aa9.89□□□□□ -0.83
LAPTM4B-201ENST00000445593 H0Y9P7 68 aa9.88□□□□□ -0.83
LAPTM4B-201ENST00000445593 MP68P56378 58 aa9.87□□□□□ -0.83
LAPTM4B-201ENST00000445593 Q8N9P0 234 aaPredicted RBP9.87□□□□□ -0.83
LAPTM4B-201ENST00000445593 SPAG11AQ6PDA7 123 aa9.85□□□□□ -0.83
LAPTM4B-201ENST00000445593 C8orf17Q9NRJ1 99 aa9.85□□□□□ -0.83
LAPTM4B-201ENST00000445593 KRTAP13-2Q52LG2 175 aa9.85□□□□□ -0.83
LAPTM4B-201ENST00000445593 LINC00313P59037 77 aa9.84□□□□□ -0.83
LAPTM4B-201ENST00000445593 A0A1B0GVX0 72 aa9.83□□□□□ -0.84
LAPTM4B-201ENST00000445593 LCE6AA0A183 80 aa9.83□□□□□ -0.84
LAPTM4B-201ENST00000445593 KMT2CQ8NEZ4 4911 aaKnown RBP9.81□□□□□ -0.84
LAPTM4B-201ENST00000445593 ZCCHC13Q8WW36 166 aaKnown RBP9.81□□□□□ -0.84
LAPTM4B-201ENST00000445593 FAT1Q14517 4588 aa9.8□□□□□ -0.84
LAPTM4B-201ENST00000445593 DYNC1H1Q14204 4646 aaKnown RBP9.78□□□□□ -0.84
LAPTM4B-201ENST00000445593 PLA2G1BP04054 148 aaKnown RBP9.78□□□□□ -0.84
LAPTM4B-201ENST00000445593 PCOTHQ58A44 107 aa9.78□□□□□ -0.84
LAPTM4B-201ENST00000445593 LIMD2Q9BT23 127 aa9.77□□□□□ -0.84
LAPTM4B-201ENST00000445593 SPINK7P58062 85 aa9.77□□□□□ -0.85
LAPTM4B-201ENST00000445593 SSBP3-AS1Q7Z2R9 100 aa9.77□□□□□ -0.85
LAPTM4B-201ENST00000445593 RETNLBQ9BQ08 111 aa9.75□□□□□ -0.85
LAPTM4B-201ENST00000445593 KRTAP1-4P0C5Y4 121 aa9.75□□□□□ -0.85
LAPTM4B-201ENST00000445593 LINC01554Q52M75 96 aa9.73□□□□□ -0.85
LAPTM4B-201ENST00000445593 MRPL34Q9BQ48 92 aaKnown RBP9.73□□□□□ -0.85
LAPTM4B-201ENST00000445593 CDC42SE1Q9NRR8 79 aa9.71□□□□□ -0.86
LAPTM4B-201ENST00000445593 TYMSOSQ8TAI1 123 aa9.7□□□□□ -0.86
LAPTM4B-201ENST00000445593 CYP4F30PQ9H0H9 118 aa9.69□□□□□ -0.86
LAPTM4B-201ENST00000445593 LOC101927531A0A1B0GV80 90 aa9.68□□□□□ -0.86
LAPTM4B-201ENST00000445593 COA5Q86WW8 74 aa9.67□□□□□ -0.86
LAPTM4B-201ENST00000445593 RYR2Q92736 4967 aa9.66□□□□□ -0.86
LAPTM4B-201ENST00000445593 ASB16-AS1Q495Z4 193 aa9.66□□□□□ -0.86
LAPTM4B-201ENST00000445593 Q75L30 129 aa9.66□□□□□ -0.86
LAPTM4B-201ENST00000445593 Q5W150 140 aa9.64□□□□□ -0.87
LAPTM4B-201ENST00000445593 TP53AIP1Q9HCN2 124 aa9.63□□□□□ -0.87
LAPTM4B-201ENST00000445593 APOBP04114 4563 aaKnown RBP9.59□□□□□ -0.87
LAPTM4B-201ENST00000445593 A0A1B0GVY2 172 aa9.59□□□□□ -0.87
LAPTM4B-201ENST00000445593 H3BPC8 53 aa9.58□□□□□ -0.88
LAPTM4B-201ENST00000445593 FLG2Q5D862 2391 aaPredicted RBP9.57□□□□□ -0.88
LAPTM4B-201ENST00000445593 LINC00304Q8N9R0 145 aa9.53□□□□□ -0.88
LAPTM4B-201ENST00000445593 CSAG1Q6PB30 78 aa9.52□□□□□ -0.89
LAPTM4B-201ENST00000445593 SPINK1P00995 79 aa9.48□□□□□ -0.89
LAPTM4B-201ENST00000445593 RYR3Q15413 4870 aa9.48□□□□□ -0.89
LAPTM4B-201ENST00000445593 SPANXA2-OT1Q8N9U9 137 aa9.47□□□□□ -0.89
LAPTM4B-201ENST00000445593 DMBT1Q9UGM3 2413 aaPredicted RBP9.47□□□□□ -0.89
LAPTM4B-201ENST00000445593 IGLV7-46A0A075B6I9 117 aa9.45□□□□□ -0.9
LAPTM4B-201ENST00000445593 C9orf92A6NGG3 77 aa9.45□□□□□ -0.9
LAPTM4B-201ENST00000445593 IGKV2D-30A0A075B6S6 120 aa9.44□□□□□ -0.9
LAPTM4B-201ENST00000445593 IGKV2-30P06310 120 aa9.44□□□□□ -0.9
LAPTM4B-201ENST00000445593 LRP1Q07954 4544 aaKnown RBP9.43□□□□□ -0.9
LAPTM4B-201ENST00000445593 KRTAP13-3Q3SY46 172 aa9.42□□□□□ -0.9
LAPTM4B-201ENST00000445593 KRTAP16-1A8MUX0 517 aa9.42□□□□□ -0.9
LAPTM4B-201ENST00000445593 KRTAP10-4P60372 401 aaPredicted RBP9.42□□□□□ -0.9
LAPTM4B-201ENST00000445593 FAM229AH3BQW9 127 aa9.39□□□□□ -0.91
LAPTM4B-201ENST00000445593 LINC01558Q9Y6Z2 57 aa9.37□□□□□ -0.91
LAPTM4B-201ENST00000445593 HRES1P13985 223 aa9.36□□□□□ -0.91
LAPTM4B-201ENST00000445593 KIAA1109Q2LD37 5005 aa9.32□□□□□ -0.92
LAPTM4B-201ENST00000445593 PKHD1L1Q86WI1 4243 aa9.31□□□□□ -0.92
LAPTM4B-201ENST00000445593 Q5VSD8 79 aa9.3□□□□□ -0.92
LAPTM4B-201ENST00000445593 HSPG2P98160 4391 aa9.3□□□□□ -0.92
LAPTM4B-201ENST00000445593 MYCBP2O75592 4640 aa9.26□□□□□ -0.93
LAPTM4B-201ENST00000445593 CRIPTQ9P021 101 aa9.25□□□□□ -0.93
LAPTM4B-201ENST00000445593 Q8N1X5 172 aa9.24□□□□□ -0.93
LAPTM4B-201ENST00000445593 KRTAP17-1Q9BYP8 105 aa9.23□□□□□ -0.93
LAPTM4B-201ENST00000445593 RPS29P62273 56 aaKnown RBP9.2□□□□□ -0.94
LAPTM4B-201ENST00000445593 RYR1P21817 5038 aa9.2□□□□□ -0.94
LAPTM4B-201ENST00000445593 ACYP2P14621 99 aa9.19□□□□□ -0.94
LAPTM4B-201ENST00000445593 EPPK1P58107 5090 aaKnown RBP9.18□□□□□ -0.94
LAPTM4B-201ENST00000445593 A0A1B0GU69 56 aa9.16□□□□□ -0.94
LAPTM4B-201ENST00000445593 DMAC1Q96GE9 116 aa9.15□□□□□ -0.95
LAPTM4B-201ENST00000445593 MIR22HGQ0VDD5 57 aa9.13□□□□□ -0.95
LAPTM4B-201ENST00000445593 TNXBP22105 4242 aa9.13□□□□□ -0.95
LAPTM4B-201ENST00000445593 A0A0A0MQY5 61 aa9.1□□□□□ -0.95
LAPTM4B-201ENST00000445593 FAT3Q8TDW7 4589 aa9.09□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 175.1 ms