RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 FAM236CP0DP71 79 aa5.49□□□□□ -1.53
HDAC6-209ENST00000440653 CD164Q04900 197 aa5.49□□□□□ -1.53
HDAC6-209ENST00000440653 PRR15Q8IV56 129 aa5.49□□□□□ -1.53
HDAC6-209ENST00000440653 RPS28P62857 69 aaKnown RBP5.48□□□□□ -1.53
HDAC6-209ENST00000440653 MOBPQ13875 183 aa5.48□□□□□ -1.53
HDAC6-209ENST00000440653 CYSTM1Q9H1C7 97 aa5.48□□□□□ -1.53
HDAC6-209ENST00000440653 TNXBP22105 4242 aa5.47□□□□□ -1.53
HDAC6-209ENST00000440653 A0A0G2JQZ4 141 aa5.47□□□□□ -1.53
HDAC6-209ENST00000440653 A0A0U1RQV1 116 aa5.47□□□□□ -1.53
HDAC6-209ENST00000440653 H7BZZ5 65 aa5.47□□□□□ -1.53
HDAC6-209ENST00000440653 FAM229BQ4G0N7 80 aa5.47□□□□□ -1.53
HDAC6-209ENST00000440653 CIRBP-AS1Q8TBR5 109 aa5.47□□□□□ -1.53
HDAC6-209ENST00000440653 C5orf47Q569G3 176 aa5.46□□□□□ -1.54
HDAC6-209ENST00000440653 H3BPC8 53 aa5.45□□□□□ -1.54
HDAC6-209ENST00000440653 KRTAP10-1P60331 282 aa5.45□□□□□ -1.54
HDAC6-209ENST00000440653 CASC2Q6XLA1 102 aa5.45□□□□□ -1.54
HDAC6-209ENST00000440653 SSBP3-AS1Q7Z2R9 100 aa5.45□□□□□ -1.54
HDAC6-209ENST00000440653 SNURFQ9Y675 71 aa5.44□□□□□ -1.54
HDAC6-209ENST00000440653 MP68P56378 58 aa5.43□□□□□ -1.54
HDAC6-209ENST00000440653 ASB16-AS1Q495Z4 193 aa5.43□□□□□ -1.54
HDAC6-209ENST00000440653 WFDC13Q8IUB5 93 aa5.43□□□□□ -1.54
HDAC6-209ENST00000440653 Q96NJ1 140 aa5.43□□□□□ -1.54
HDAC6-209ENST00000440653 FAM30AQ9NZY2 134 aa5.43□□□□□ -1.54
HDAC6-209ENST00000440653 DNAH8Q96JB1 4490 aa5.42□□□□□ -1.54
HDAC6-209ENST00000440653 MMP24-AS1A0A0U1RRL7 71 aa5.42□□□□□ -1.54
HDAC6-209ENST00000440653 SERP1Q9Y6X1 66 aa5.42□□□□□ -1.54
HDAC6-209ENST00000440653 DEFB116Q30KQ4 102 aa5.41□□□□□ -1.54
HDAC6-209ENST00000440653 FSIP2Q5CZC0 6907 aa5.4□□□□□ -1.54
HDAC6-209ENST00000440653 A0A1B0GVX0 72 aa5.4□□□□□ -1.54
HDAC6-209ENST00000440653 TP53AIP1Q9HCN2 124 aa5.4□□□□□ -1.54
HDAC6-209ENST00000440653 hDV103S1A0JD37 113 aa5.39□□□□□ -1.55
HDAC6-209ENST00000440653 Q5XG85 94 aa5.39□□□□□ -1.55
HDAC6-209ENST00000440653 ZCCHC13Q8WW36 166 aaKnown RBP5.39□□□□□ -1.55
HDAC6-209ENST00000440653 OXTP01178 125 aa5.38□□□□□ -1.55
HDAC6-209ENST00000440653 LIMD2Q9BT23 127 aa5.38□□□□□ -1.55
HDAC6-209ENST00000440653 C8orf17Q9NRJ1 99 aa5.38□□□□□ -1.55
HDAC6-209ENST00000440653 TRAV22A0A0B4J277 110 aa5.37□□□□□ -1.55
HDAC6-209ENST00000440653 C8orf87E5RJ46 101 aa5.37□□□□□ -1.55
HDAC6-209ENST00000440653 HRCT1Q6UXD1 115 aa5.37□□□□□ -1.55
HDAC6-209ENST00000440653 H0Y9P7 68 aa5.36□□□□□ -1.55
HDAC6-209ENST00000440653 C4orf48Q5BLP8 95 aa5.35□□□□□ -1.55
HDAC6-209ENST00000440653 ANAPC11Q9NYG5 84 aa5.35□□□□□ -1.55
HDAC6-209ENST00000440653 PLA2G1BP04054 148 aaKnown RBP5.34□□□□□ -1.55
HDAC6-209ENST00000440653 IGHV6-1A0A0B4J1U7 121 aa5.33□□□□□ -1.56
HDAC6-209ENST00000440653 SPINK6Q6UWN8 80 aa5.33□□□□□ -1.56
HDAC6-209ENST00000440653 MRPL34Q9BQ48 92 aaKnown RBP5.33□□□□□ -1.56
HDAC6-209ENST00000440653 A0A087X002 238 aa5.32□□□□□ -1.56
HDAC6-209ENST00000440653 KRTAP1-4P0C5Y4 121 aa5.32□□□□□ -1.56
HDAC6-209ENST00000440653 RPS29P62273 56 aaKnown RBP5.32□□□□□ -1.56
HDAC6-209ENST00000440653 SPANXA2-OT1Q8N9U9 137 aa5.32□□□□□ -1.56
HDAC6-209ENST00000440653 CRCT1Q9UGL9 99 aa5.32□□□□□ -1.56
HDAC6-209ENST00000440653 KRTAP13-2Q52LG2 175 aa5.31□□□□□ -1.56
HDAC6-209ENST00000440653 CYP4F30PQ9H0H9 118 aa5.31□□□□□ -1.56
HDAC6-209ENST00000440653 LPAP08519 4548 aa5.31□□□□□ -1.56
HDAC6-209ENST00000440653 MT1HL1P0DM35 61 aa5.3□□□□□ -1.56
HDAC6-209ENST00000440653 KRTAP10-4P60372 401 aaPredicted RBP5.3□□□□□ -1.56
HDAC6-209ENST00000440653 LINC00208Q96KT6 92 aa5.3□□□□□ -1.56
HDAC6-209ENST00000440653 SMIM26A0A096LP01 95 aa5.29□□□□□ -1.56
HDAC6-209ENST00000440653 SPINK1P00995 79 aa5.28□□□□□ -1.56
HDAC6-209ENST00000440653 C1orf64Q8NEQ6 169 aa5.28□□□□□ -1.56
HDAC6-209ENST00000440653 NDUFS5O43920 106 aa5.27□□□□□ -1.57
HDAC6-209ENST00000440653 LCE2AQ5TA79 106 aaPredicted RBP5.27□□□□□ -1.57
HDAC6-209ENST00000440653 SPAG11AQ6PDA7 123 aa5.27□□□□□ -1.57
HDAC6-209ENST00000440653 TYMSOSQ8TAI1 123 aa5.27□□□□□ -1.57
HDAC6-209ENST00000440653 LOC101927531A0A1B0GV80 90 aa5.26□□□□□ -1.57
HDAC6-209ENST00000440653 C1orf195Q5TG92 126 aa5.25□□□□□ -1.57
HDAC6-209ENST00000440653 LINC00313P59037 77 aa5.23□□□□□ -1.57
HDAC6-209ENST00000440653 LINC00304Q8N9R0 145 aa5.23□□□□□ -1.57
HDAC6-209ENST00000440653 Q8N9P0 234 aaPredicted RBP5.21□□□□□ -1.58
HDAC6-209ENST00000440653 IGLV7-46A0A075B6I9 117 aa5.2□□□□□ -1.58
HDAC6-209ENST00000440653 KRTAP13-3Q3SY46 172 aa5.19□□□□□ -1.58
HDAC6-209ENST00000440653 NOTCH2NLQ7Z3S9 236 aa5.19□□□□□ -1.58
HDAC6-209ENST00000440653 V9GYY9 64 aa5.18□□□□□ -1.58
HDAC6-209ENST00000440653 FP248Q71RG6 208 aaPredicted RBP5.17□□□□□ -1.58
HDAC6-209ENST00000440653 KRTAP16-1A8MUX0 517 aa5.16□□□□□ -1.58
HDAC6-209ENST00000440653 PRR26Q8N8Z3 221 aa5.16□□□□□ -1.58
HDAC6-209ENST00000440653 LCE2DQ5TA82 110 aaPredicted RBP5.15□□□□□ -1.59
HDAC6-209ENST00000440653 PRR4Q16378 134 aa5.14□□□□□ -1.59
HDAC6-209ENST00000440653 PCOTHQ58A44 107 aa5.14□□□□□ -1.59
HDAC6-209ENST00000440653 KRTAP9-7A8MTY7 169 aa5.13□□□□□ -1.59
HDAC6-209ENST00000440653 Q1T7F1 81 aa5.13□□□□□ -1.59
HDAC6-209ENST00000440653 Q5W150 140 aa5.13□□□□□ -1.59
HDAC6-209ENST00000440653 IGKV2-30P06310 120 aa5.11□□□□□ -1.59
HDAC6-209ENST00000440653 C4orf26Q17RF5 130 aa5.11□□□□□ -1.59
HDAC6-209ENST00000440653 COA5Q86WW8 74 aa5.11□□□□□ -1.59
HDAC6-209ENST00000440653 MPLKIPQ8TAP9 179 aa5.08□□□□□ -1.6
HDAC6-209ENST00000440653 DMAC1Q96GE9 116 aa5.08□□□□□ -1.6
HDAC6-209ENST00000440653 C7orf65Q6ZTY9 151 aa5.06□□□□□ -1.6
HDAC6-209ENST00000440653 ACYP2P14621 99 aa5.05□□□□□ -1.6
HDAC6-209ENST00000440653 C20orf166-AS1Q96NR2 134 aa5.05□□□□□ -1.6
HDAC6-209ENST00000440653 A8MUU9 505 aa5.04□□□□□ -1.6
HDAC6-209ENST00000440653 HRES1P13985 223 aa5.04□□□□□ -1.6
HDAC6-209ENST00000440653 A8MUN3 132 aa5.02□□□□□ -1.61
HDAC6-209ENST00000440653 IGKV2D-30A0A075B6S6 120 aa5.01□□□□□ -1.61
HDAC6-209ENST00000440653 KRTAP9-1A8MXZ3 250 aaPredicted RBP5□□□□□ -1.61
HDAC6-209ENST00000440653 PRO0628Q9UI54 55 aa5□□□□□ -1.61
HDAC6-209ENST00000440653 CHKB-CPT1BH3BT56 60 aa4.99□□□□□ -1.61
HDAC6-209ENST00000440653 Q75L30 129 aa4.99□□□□□ -1.61
HDAC6-209ENST00000440653 RETNLBQ9BQ08 111 aa4.99□□□□□ -1.61
HDAC6-209ENST00000440653 KRTAP10-8P60410 259 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms