RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 MP68P56378 58 aa8.88□□□□□ -0.99
IFT140-204ENST00000439987 DEFB116Q30KQ4 102 aa8.84□□□□□ -0.99
IFT140-204ENST00000439987 H3BPC8 53 aa8.83□□□□□ -1
IFT140-204ENST00000439987 SPANXA2-OT1Q8N9U9 137 aa8.83□□□□□ -1
IFT140-204ENST00000439987 LINC00472Q9H8W2 130 aa8.82□□□□□ -1
IFT140-204ENST00000439987 A8MUN3 132 aa8.81□□□□□ -1
IFT140-204ENST00000439987 PRR4Q16378 134 aa8.81□□□□□ -1
IFT140-204ENST00000439987 LIMD2Q9BT23 127 aa8.81□□□□□ -1
IFT140-204ENST00000439987 APOBP04114 4563 aaKnown RBP8.81□□□□□ -1
IFT140-204ENST00000439987 SSBP3-AS1Q7Z2R9 100 aa8.8□□□□□ -1
IFT140-204ENST00000439987 A0A087X002 238 aa8.8□□□□□ -1
IFT140-204ENST00000439987 SMR3BP02814 79 aaPredicted RBP8.79□□□□□ -1
IFT140-204ENST00000439987 KRTAP1-4P0C5Y4 121 aa8.79□□□□□ -1
IFT140-204ENST00000439987 Q5VV11 94 aa8.78□□□□□ -1
IFT140-204ENST00000439987 KRTAP13-2Q52LG2 175 aa8.77□□□□□ -1
IFT140-204ENST00000439987 LINC00208Q96KT6 92 aa8.77□□□□□ -1
IFT140-204ENST00000439987 CD164Q04900 197 aa8.76□□□□□ -1.01
IFT140-204ENST00000439987 RYR3Q15413 4870 aa8.76□□□□□ -1.01
IFT140-204ENST00000439987 SPINK6Q6UWN8 80 aa8.76□□□□□ -1.01
IFT140-204ENST00000439987 WFDC13Q8IUB5 93 aa8.76□□□□□ -1.01
IFT140-204ENST00000439987 Q96NJ1 140 aa8.75□□□□□ -1.01
IFT140-204ENST00000439987 Q8N9P0 234 aaPredicted RBP8.75□□□□□ -1.01
IFT140-204ENST00000439987 KRTAP29-1A8MX34 341 aaPredicted RBP8.74□□□□□ -1.01
IFT140-204ENST00000439987 A8MWP4 228 aa8.73□□□□□ -1.01
IFT140-204ENST00000439987 PLA2G1BP04054 148 aaKnown RBP8.73□□□□□ -1.01
IFT140-204ENST00000439987 H0Y9P7 68 aa8.72□□□□□ -1.01
IFT140-204ENST00000439987 CHKB-CPT1BH3BT56 60 aa8.72□□□□□ -1.01
IFT140-204ENST00000439987 FAT1Q14517 4588 aa8.72□□□□□ -1.01
IFT140-204ENST00000439987 KRTAP10-4P60372 401 aaPredicted RBP8.7□□□□□ -1.02
IFT140-204ENST00000439987 CASC2Q6XLA1 102 aa8.7□□□□□ -1.02
IFT140-204ENST00000439987 ATP11AUNQ6ZP68 121 aa8.68□□□□□ -1.02
IFT140-204ENST00000439987 PRR15LQ9BU68 103 aa8.68□□□□□ -1.02
IFT140-204ENST00000439987 Q75L30 129 aa8.67□□□□□ -1.02
IFT140-204ENST00000439987 LOC101927531A0A1B0GV80 90 aa8.67□□□□□ -1.02
IFT140-204ENST00000439987 KTN1-AS1Q86SY8 53 aa8.67□□□□□ -1.02
IFT140-204ENST00000439987 TYMSOSQ8TAI1 123 aa8.65□□□□□ -1.02
IFT140-204ENST00000439987 ASB16-AS1Q495Z4 193 aa8.64□□□□□ -1.03
IFT140-204ENST00000439987 IGLV7-46A0A075B6I9 117 aa8.63□□□□□ -1.03
IFT140-204ENST00000439987 A8MU10 97 aa8.63□□□□□ -1.03
IFT140-204ENST00000439987 NDUFS5O43920 106 aa8.63□□□□□ -1.03
IFT140-204ENST00000439987 CDK2AP2O75956 126 aa8.62□□□□□ -1.03
IFT140-204ENST00000439987 PRR26Q8N8Z3 221 aa8.62□□□□□ -1.03
IFT140-204ENST00000439987 MMP24-AS1A0A0U1RRL7 71 aa8.61□□□□□ -1.03
IFT140-204ENST00000439987 COA5Q86WW8 74 aa8.61□□□□□ -1.03
IFT140-204ENST00000439987 A0A1B0GVX0 72 aa8.61□□□□□ -1.03
IFT140-204ENST00000439987 A6NED7 52 aa8.6□□□□□ -1.03
IFT140-204ENST00000439987 C4orf48Q5BLP8 95 aa8.6□□□□□ -1.03
IFT140-204ENST00000439987 IGHV6-1A0A0B4J1U7 121 aa8.59□□□□□ -1.03
IFT140-204ENST00000439987 LCA10Q71F78 164 aa8.59□□□□□ -1.03
IFT140-204ENST00000439987 SPTSSBQ8NFR3 76 aa8.59□□□□□ -1.03
IFT140-204ENST00000439987 FAM229AH3BQW9 127 aa8.59□□□□□ -1.03
IFT140-204ENST00000439987 C8orf17Q9NRJ1 99 aa8.58□□□□□ -1.04
IFT140-204ENST00000439987 CDC42SE1Q9NRR8 79 aa8.58□□□□□ -1.04
IFT140-204ENST00000439987 HSPG2P98160 4391 aa8.57□□□□□ -1.04
IFT140-204ENST00000439987 SPINK1P00995 79 aa8.57□□□□□ -1.04
IFT140-204ENST00000439987 TP53AIP1Q9HCN2 124 aa8.56□□□□□ -1.04
IFT140-204ENST00000439987 LINC00304Q8N9R0 145 aa8.55□□□□□ -1.04
IFT140-204ENST00000439987 LINC01558Q9Y6Z2 57 aa8.55□□□□□ -1.04
IFT140-204ENST00000439987 A6NN06 94 aa8.54□□□□□ -1.04
IFT140-204ENST00000439987 RBM12B-AS1Q9P1G2 102 aa8.53□□□□□ -1.04
IFT140-204ENST00000439987 Q5VSD8 79 aa8.53□□□□□ -1.04
IFT140-204ENST00000439987 PKHD1L1Q86WI1 4243 aa8.52□□□□□ -1.05
IFT140-204ENST00000439987 SPAG11AQ6PDA7 123 aa8.52□□□□□ -1.05
IFT140-204ENST00000439987 NOTCH2NLQ7Z3S9 236 aa8.52□□□□□ -1.05
IFT140-204ENST00000439987 RYR1P21817 5038 aa8.52□□□□□ -1.05
IFT140-204ENST00000439987 RPS29P62273 56 aaKnown RBP8.51□□□□□ -1.05
IFT140-204ENST00000439987 MRPL34Q9BQ48 92 aaKnown RBP8.47□□□□□ -1.05
IFT140-204ENST00000439987 C8orf87E5RJ46 101 aa8.47□□□□□ -1.05
IFT140-204ENST00000439987 C7orf65Q6ZTY9 151 aa8.47□□□□□ -1.05
IFT140-204ENST00000439987 PCOTHQ58A44 107 aa8.46□□□□□ -1.06
IFT140-204ENST00000439987 KIAA1109Q2LD37 5005 aa8.45□□□□□ -1.06
IFT140-204ENST00000439987 EPPK1P58107 5090 aaKnown RBP8.44□□□□□ -1.06
IFT140-204ENST00000439987 LINC00313P59037 77 aa8.43□□□□□ -1.06
IFT140-204ENST00000439987 KRTAP17-1Q9BYP8 105 aa8.43□□□□□ -1.06
IFT140-204ENST00000439987 HRES1P13985 223 aa8.39□□□□□ -1.07
IFT140-204ENST00000439987 Q8N1X5 172 aa8.38□□□□□ -1.07
IFT140-204ENST00000439987 LRP1Q07954 4544 aaKnown RBP8.38□□□□□ -1.07
IFT140-204ENST00000439987 KRTAP10-8P60410 259 aa8.36□□□□□ -1.07
IFT140-204ENST00000439987 SPINK7P58062 85 aa8.36□□□□□ -1.07
IFT140-204ENST00000439987 TNXBP22105 4242 aa8.35□□□□□ -1.07
IFT140-204ENST00000439987 KRTAP16-1A8MUX0 517 aa8.35□□□□□ -1.07
IFT140-204ENST00000439987 FLG2Q5D862 2391 aaPredicted RBP8.34□□□□□ -1.07
IFT140-204ENST00000439987 FAT3Q8TDW7 4589 aa8.3□□□□□ -1.08
IFT140-204ENST00000439987 Q5W150 140 aa8.29□□□□□ -1.08
IFT140-204ENST00000439987 RETNLBQ9BQ08 111 aa8.28□□□□□ -1.08
IFT140-204ENST00000439987 KRTAP13-3Q3SY46 172 aa8.27□□□□□ -1.08
IFT140-204ENST00000439987 MYCBP2O75592 4640 aa8.26□□□□□ -1.09
IFT140-204ENST00000439987 ACYP2P14621 99 aa8.26□□□□□ -1.09
IFT140-204ENST00000439987 DMBT1Q9UGM3 2413 aaPredicted RBP8.24□□□□□ -1.09
IFT140-204ENST00000439987 MT1HL1P0DM35 61 aa8.22□□□□□ -1.09
IFT140-204ENST00000439987 C9orf92A6NGG3 77 aa8.21□□□□□ -1.1
IFT140-204ENST00000439987 KRTAP4-5Q9BYR2 181 aa8.16□□□□□ -1.1
IFT140-204ENST00000439987 DMAC1Q96GE9 116 aa8.16□□□□□ -1.1
IFT140-204ENST00000439987 C20orf166-AS1Q96NR2 134 aa8.15□□□□□ -1.11
IFT140-204ENST00000439987 SPATA8Q6RVD6 105 aa8.14□□□□□ -1.11
IFT140-204ENST00000439987 A8MUU9 505 aa8.14□□□□□ -1.11
IFT140-204ENST00000439987 A0A1B0GU69 56 aa8.13□□□□□ -1.11
IFT140-204ENST00000439987 IGKV2-30P06310 120 aa8.12□□□□□ -1.11
IFT140-204ENST00000439987 PRAC1Q96KF2 57 aa8.09□□□□□ -1.11
IFT140-204ENST00000439987 LINC01554Q52M75 96 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms