RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 XP32Q5T750 250 aa9.72□□□□□ -0.85
CCDC188-201ENST00000439765 Q6ZVQ6 151 aa9.71□□□□□ -0.86
CCDC188-201ENST00000439765 UBL5Q9BZL1 73 aa9.71□□□□□ -0.86
CCDC188-201ENST00000439765 DEFB116Q30KQ4 102 aa9.69□□□□□ -0.86
CCDC188-201ENST00000439765 IGKV4-1P06312 121 aa9.66□□□□□ -0.86
CCDC188-201ENST00000439765 J3KT08 172 aa9.65□□□□□ -0.87
CCDC188-201ENST00000439765 SEC61BP60468 96 aaKnown RBP9.64□□□□□ -0.87
CCDC188-201ENST00000439765 SIGMAR1Q99720 223 aa9.63□□□□□ -0.87
CCDC188-201ENST00000439765 BPY2O14599 106 aa9.62□□□□□ -0.87
CCDC188-201ENST00000439765 KRTAP9-2Q9BYQ4 174 aa9.61□□□□□ -0.87
CCDC188-201ENST00000439765 DSCR10P59022 87 aa9.58□□□□□ -0.88
CCDC188-201ENST00000439765 A8MWP4 228 aa9.57□□□□□ -0.88
CCDC188-201ENST00000439765 NDUFB1O75438 58 aa9.56□□□□□ -0.88
CCDC188-201ENST00000439765 LINC00643Q86TS7 51 aa9.55□□□□□ -0.88
CCDC188-201ENST00000439765 KRTAP4-1Q9BYQ7 146 aa9.55□□□□□ -0.88
CCDC188-201ENST00000439765 IGKV3D-7A0A0C4DH55 119 aa9.54□□□□□ -0.88
CCDC188-201ENST00000439765 CXCL6P80162 114 aa9.54□□□□□ -0.88
CCDC188-201ENST00000439765 A0A1B0GVX0 72 aa9.53□□□□□ -0.88
CCDC188-201ENST00000439765 PCOTHQ58A44 107 aa9.53□□□□□ -0.88
CCDC188-201ENST00000439765 PRR15Q8IV56 129 aa9.53□□□□□ -0.88
CCDC188-201ENST00000439765 IGHV6-1A0A0B4J1U7 121 aa9.52□□□□□ -0.89
CCDC188-201ENST00000439765 K7EQZ3 153 aa9.51□□□□□ -0.89
CCDC188-201ENST00000439765 ATP5EP2Q5VTU8 51 aa9.51□□□□□ -0.89
CCDC188-201ENST00000439765 RPL37P61927 97 aaKnown RBP9.5□□□□□ -0.89
CCDC188-201ENST00000439765 Q8N9L7 120 aa9.49□□□□□ -0.89
CCDC188-201ENST00000439765 LINC00313P59037 77 aa9.48□□□□□ -0.89
CCDC188-201ENST00000439765 C8orf87E5RJ46 101 aa9.47□□□□□ -0.89
CCDC188-201ENST00000439765 NOTCH2NLQ7Z3S9 236 aa9.47□□□□□ -0.89
CCDC188-201ENST00000439765 C8orf17Q9NRJ1 99 aa9.45□□□□□ -0.9
CCDC188-201ENST00000439765 MMP24-AS1A0A0U1RRL7 71 aa9.4□□□□□ -0.9
CCDC188-201ENST00000439765 KRTAP16-1A8MUX0 517 aa9.4□□□□□ -0.91
CCDC188-201ENST00000439765 HIST1H4AP62805 103 aaKnown RBP9.39□□□□□ -0.91
CCDC188-201ENST00000439765 Q75L30 129 aa9.39□□□□□ -0.91
CCDC188-201ENST00000439765 MT-ATP8P03928 68 aa9.37□□□□□ -0.91
CCDC188-201ENST00000439765 hDV103S1A0JD37 113 aa9.36□□□□□ -0.91
CCDC188-201ENST00000439765 HCG22E2RYF7 251 aa9.35□□□□□ -0.91
CCDC188-201ENST00000439765 LCE2CQ5TA81 110 aa9.34□□□□□ -0.91
CCDC188-201ENST00000439765 WFDC13Q8IUB5 93 aa9.34□□□□□ -0.91
CCDC188-201ENST00000439765 TMEM254Q8TBM7 123 aa9.34□□□□□ -0.91
CCDC188-201ENST00000439765 KRTAP19-2Q3LHN2 52 aa9.34□□□□□ -0.91
CCDC188-201ENST00000439765 CASC2Q6XLA1 102 aa9.34□□□□□ -0.91
CCDC188-201ENST00000439765 ATP11AUNQ6ZP68 121 aa9.34□□□□□ -0.91
CCDC188-201ENST00000439765 C20orf166-AS1Q96NR2 134 aa9.34□□□□□ -0.91
CCDC188-201ENST00000439765 MRPL34Q9BQ48 92 aaKnown RBP9.33□□□□□ -0.92
CCDC188-201ENST00000439765 A0A087WVE0 104 aa9.32□□□□□ -0.92
CCDC188-201ENST00000439765 KRTAP9-6A0A140TA67 174 aa9.32□□□□□ -0.92
CCDC188-201ENST00000439765 A8MUU9 505 aa9.32□□□□□ -0.92
CCDC188-201ENST00000439765 IMUPQ9GZP8 106 aa9.32□□□□□ -0.92
CCDC188-201ENST00000439765 Q8N9P0 234 aaPredicted RBP9.3□□□□□ -0.92
CCDC188-201ENST00000439765 LCE2DQ5TA82 110 aaPredicted RBP9.27□□□□□ -0.93
CCDC188-201ENST00000439765 NDUFS5O43920 106 aa9.23□□□□□ -0.93
CCDC188-201ENST00000439765 MT1HP80294 61 aa9.23□□□□□ -0.93
CCDC188-201ENST00000439765 SCGB1A1P11684 91 aa9.22□□□□□ -0.93
CCDC188-201ENST00000439765 COX6B2Q6YFQ2 88 aa9.15□□□□□ -0.94
CCDC188-201ENST00000439765 ZCCHC13Q8WW36 166 aaKnown RBP9.15□□□□□ -0.94
CCDC188-201ENST00000439765 TP53AIP1Q9HCN2 124 aa9.15□□□□□ -0.95
CCDC188-201ENST00000439765 FSIP2Q5CZC0 6907 aa9.14□□□□□ -0.95
CCDC188-201ENST00000439765 FAM236AA0A1B0GUQ0 79 aa9.13□□□□□ -0.95
CCDC188-201ENST00000439765 FAM236BA0A1B0GV22 79 aa9.13□□□□□ -0.95
CCDC188-201ENST00000439765 LORP23490 312 aaPredicted RBP9.09□□□□□ -0.95
CCDC188-201ENST00000439765 Q5W150 140 aa9.09□□□□□ -0.95
CCDC188-201ENST00000439765 OCR1Q9BZK8 76 aa9.08□□□□□ -0.96
CCDC188-201ENST00000439765 KRTAP10-6P60371 365 aaPredicted RBP9.07□□□□□ -0.96
CCDC188-201ENST00000439765 UQCRQO14949 82 aa9.06□□□□□ -0.96
CCDC188-201ENST00000439765 FLGP20930 4061 aaPredicted RBP9.05□□□□□ -0.96
CCDC188-201ENST00000439765 CRCT1Q9UGL9 99 aa9.05□□□□□ -0.96
CCDC188-201ENST00000439765 ATOX1O00244 68 aa9.02□□□□□ -0.97
CCDC188-201ENST00000439765 PCP4P48539 62 aa9.02□□□□□ -0.97
CCDC188-201ENST00000439765 M0R2T5 61 aa9.01□□□□□ -0.97
CCDC188-201ENST00000439765 SMIM20Q8N5G0 67 aa9.01□□□□□ -0.97
CCDC188-201ENST00000439765 TRAV22A0A0B4J277 110 aa9□□□□□ -0.97
CCDC188-201ENST00000439765 TRAV7A0A075B6U4 112 aa8.97□□□□□ -0.97
CCDC188-201ENST00000439765 H0Y9P7 68 aa8.96□□□□□ -0.97
CCDC188-201ENST00000439765 HRES1P13985 223 aa8.96□□□□□ -0.97
CCDC188-201ENST00000439765 SPINK7P58062 85 aa8.96□□□□□ -0.97
CCDC188-201ENST00000439765 C5orf47Q569G3 176 aa8.96□□□□□ -0.98
CCDC188-201ENST00000439765 IGKV2D-30A0A075B6S6 120 aa8.93□□□□□ -0.98
CCDC188-201ENST00000439765 FAM236DA0A1B0GTK5 79 aa8.93□□□□□ -0.98
CCDC188-201ENST00000439765 IGKV2-30P06310 120 aa8.93□□□□□ -0.98
CCDC188-201ENST00000439765 FAM236CP0DP71 79 aa8.93□□□□□ -0.98
CCDC188-201ENST00000439765 MP68P56378 58 aa8.92□□□□□ -0.98
CCDC188-201ENST00000439765 C7orf65Q6ZTY9 151 aa8.91□□□□□ -0.98
CCDC188-201ENST00000439765 MPLKIPQ8TAP9 179 aa8.91□□□□□ -0.98
CCDC188-201ENST00000439765 RBM12B-AS1Q9P1G2 102 aa8.91□□□□□ -0.98
CCDC188-201ENST00000439765 ANAPC13Q9BS18 74 aa8.9□□□□□ -0.98
CCDC188-201ENST00000439765 SERP2Q8N6R1 65 aa8.89□□□□□ -0.99
CCDC188-201ENST00000439765 LOC101927531A0A1B0GV80 90 aa8.89□□□□□ -0.99
CCDC188-201ENST00000439765 LINC00208Q96KT6 92 aa8.89□□□□□ -0.99
CCDC188-201ENST00000439765 C1orf64Q8NEQ6 169 aa8.88□□□□□ -0.99
CCDC188-201ENST00000439765 H3BPC8 53 aa8.87□□□□□ -0.99
CCDC188-201ENST00000439765 CYP4F30PQ9H0H9 118 aa8.86□□□□□ -0.99
CCDC188-201ENST00000439765 COX7CP15954 63 aa8.8□□□□□ -1
CCDC188-201ENST00000439765 C20orf197Q8N268 126 aa8.76□□□□□ -1.01
CCDC188-201ENST00000439765 KLKP1Q107X0 134 aa8.75□□□□□ -1.01
CCDC188-201ENST00000439765 SNURFQ9Y675 71 aa8.74□□□□□ -1.01
CCDC188-201ENST00000439765 KRTAP9-8Q9BYQ0 159 aa8.73□□□□□ -1.01
CCDC188-201ENST00000439765 CCDC179H3BU77 68 aa8.72□□□□□ -1.01
CCDC188-201ENST00000439765 C4orf26Q17RF5 130 aa8.72□□□□□ -1.01
CCDC188-201ENST00000439765 KRTAP3-1Q9BYR8 98 aa8.63□□□□□ -1.03
CCDC188-201ENST00000439765 USH2AO75445 5202 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms