RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 PLCE1Q9P212 2302 aa1.44□□□□□ -2.18
HMGB1P12-201ENST00000438594 H0YAA0 97 aa1.43□□□□□ -2.18
HMGB1P12-201ENST00000438594 KLK9Q2XQG4 91 aa1.43□□□□□ -2.18
HMGB1P12-201ENST00000438594 TMEM167BQ9NRX6 74 aa1.43□□□□□ -2.18
HMGB1P12-201ENST00000438594 FRYQ5TBA9 3013 aa1.43□□□□□ -2.18
HMGB1P12-201ENST00000438594 FAM186AA6NE01 2351 aa1.43□□□□□ -2.18
HMGB1P12-201ENST00000438594 SVEP1Q4LDE5 3571 aa1.43□□□□□ -2.18
HMGB1P12-201ENST00000438594 CNTRLQ7Z7A1 2325 aa1.43□□□□□ -2.18
HMGB1P12-201ENST00000438594 PTPRQQ9UMZ3 2332 aa1.43□□□□□ -2.18
HMGB1P12-201ENST00000438594 APC2O95996 2303 aa1.42□□□□□ -2.18
HMGB1P12-201ENST00000438594 LYNX1G3V0Z9 82 aa1.42□□□□□ -2.18
HMGB1P12-201ENST00000438594 TFF3Q07654 80 aa1.42□□□□□ -2.18
HMGB1P12-201ENST00000438594 LELP1Q5T871 98 aa1.42□□□□□ -2.18
HMGB1P12-201ENST00000438594 CNFNQ9BYD5 112 aa1.42□□□□□ -2.18
HMGB1P12-201ENST00000438594 KMT2CQ8NEZ4 4911 aaKnown RBP1.42□□□□□ -2.18
HMGB1P12-201ENST00000438594 PTPRZ1P23471 2315 aaPredicted RBP1.41□□□□□ -2.18
HMGB1P12-201ENST00000438594 HRNRQ86YZ3 2850 aaPredicted RBP1.41□□□□□ -2.18
HMGB1P12-201ENST00000438594 CNOT1A5YKK6 2376 aaKnown RBP1.41□□□□□ -2.18
HMGB1P12-201ENST00000438594 KRTAP12-4P60329 112 aa1.41□□□□□ -2.18
HMGB1P12-201ENST00000438594 KRTAP13-1Q8IUC0 172 aa1.41□□□□□ -2.18
HMGB1P12-201ENST00000438594 DEFB119Q8N690 84 aa1.41□□□□□ -2.18
HMGB1P12-201ENST00000438594 ADGRG4Q8IZF6 3080 aa1.41□□□□□ -2.18
HMGB1P12-201ENST00000438594 EP300Q09472 2414 aaPredicted RBP1.41□□□□□ -2.18
HMGB1P12-201ENST00000438594 RYR2Q92736 4967 aa1.41□□□□□ -2.18
HMGB1P12-201ENST00000438594 IGF2RP11717 2491 aa1.41□□□□□ -2.18
HMGB1P12-201ENST00000438594 ITPR1Q14643 2758 aa1.41□□□□□ -2.18
HMGB1P12-201ENST00000438594 ATMQ13315 3056 aa1.41□□□□□ -2.18
HMGB1P12-201ENST00000438594 BOD1L1Q8NFC6 3051 aa1.41□□□□□ -2.18
HMGB1P12-201ENST00000438594 CSMD1Q96PZ7 3565 aa1.41□□□□□ -2.18
HMGB1P12-201ENST00000438594 PRB3Q04118 309 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P12-201ENST00000438594 KAAG1Q9UBP8 84 aa1.4□□□□□ -2.19
HMGB1P12-201ENST00000438594 MGAQ8IWI9 3026 aa1.4□□□□□ -2.19
HMGB1P12-201ENST00000438594 ZZEF1O43149 2961 aa1.39□□□□□ -2.19
HMGB1P12-201ENST00000438594 UTP20O75691 2785 aaKnown RBP1.39□□□□□ -2.19
HMGB1P12-201ENST00000438594 EPPK1P58107 5090 aaKnown RBP1.39□□□□□ -2.19
HMGB1P12-201ENST00000438594 BIRC6Q9NR09 4857 aa1.39□□□□□ -2.19
HMGB1P12-201ENST00000438594 H3BSH0 61 aa1.39□□□□□ -2.19
HMGB1P12-201ENST00000438594 ACACAQ13085 2346 aa1.39□□□□□ -2.19
HMGB1P12-201ENST00000438594 CSMD2Q7Z408 3487 aa1.39□□□□□ -2.19
HMGB1P12-201ENST00000438594 FBN2P35556 2912 aa1.39□□□□□ -2.19
HMGB1P12-201ENST00000438594 RIF1Q5UIP0 2472 aaKnown RBP1.39□□□□□ -2.19
HMGB1P12-201ENST00000438594 TPRP12270 2363 aaKnown RBP1.39□□□□□ -2.19
HMGB1P12-201ENST00000438594 VPS13CQ709C8 3753 aa1.38□□□□□ -2.19
HMGB1P12-201ENST00000438594 PRCDQ00LT1 54 aa1.38□□□□□ -2.19
HMGB1P12-201ENST00000438594 SMIM2Q9BVW6 85 aa1.38□□□□□ -2.19
HMGB1P12-201ENST00000438594 PRO0255Q9UI72 69 aa1.38□□□□□ -2.19
HMGB1P12-201ENST00000438594 DMXL2Q8TDJ6 3036 aa1.38□□□□□ -2.19
HMGB1P12-201ENST00000438594 SPTA1P02549 2419 aa1.38□□□□□ -2.19
HMGB1P12-201ENST00000438594 ZNF469Q96JG9 3925 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P12-201ENST00000438594 MUC5BQ9HC84 5762 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P12-201ENST00000438594 ALMS1Q8TCU4 4167 aa1.37□□□□□ -2.19
HMGB1P12-201ENST00000438594 ACACBO00763 2458 aa1.37□□□□□ -2.19
HMGB1P12-201ENST00000438594 NBPF19A0A087WUL8 3843 aa1.37□□□□□ -2.19
HMGB1P12-201ENST00000438594 DEFB108AA8MXU0 73 aa1.37□□□□□ -2.19
HMGB1P12-201ENST00000438594 SPRR1AP35321 89 aa1.37□□□□□ -2.19
HMGB1P12-201ENST00000438594 MINOS1Q5TGZ0 78 aa1.37□□□□□ -2.19
HMGB1P12-201ENST00000438594 Q6ZSA8 131 aa1.37□□□□□ -2.19
HMGB1P12-201ENST00000438594 TMEM167AQ8TBQ9 72 aa1.37□□□□□ -2.19
HMGB1P12-201ENST00000438594 PIEZO2Q9H5I5 2752 aa1.37□□□□□ -2.19
HMGB1P12-201ENST00000438594 TEX15Q9BXT5 2789 aa1.36□□□□□ -2.19
HMGB1P12-201ENST00000438594 ABCA13Q86UQ4 5058 aa1.36□□□□□ -2.19
HMGB1P12-201ENST00000438594 SYNE2Q8WXH0 6885 aaKnown RBP1.36□□□□□ -2.19
HMGB1P12-201ENST00000438594 DSPP15924 2871 aaKnown RBP1.36□□□□□ -2.19
HMGB1P12-201ENST00000438594 FBN1P35555 2871 aaKnown RBP1.36□□□□□ -2.19
HMGB1P12-201ENST00000438594 WT1-ASQ06250 92 aa1.36□□□□□ -2.19
HMGB1P12-201ENST00000438594 SPINK9Q5DT21 86 aa1.36□□□□□ -2.19
HMGB1P12-201ENST00000438594 C6orf48Q9UBA6 75 aa1.36□□□□□ -2.19
HMGB1P12-201ENST00000438594 PKDREJQ9NTG1 2253 aa1.36□□□□□ -2.19
HMGB1P12-201ENST00000438594 NBEAQ8NFP9 2946 aa1.36□□□□□ -2.19
HMGB1P12-201ENST00000438594 NEBP20929 6669 aa1.35□□□□□ -2.19
HMGB1P12-201ENST00000438594 SORL1Q92673 2214 aa1.35□□□□□ -2.19
HMGB1P12-201ENST00000438594 DCHS2Q6V1P9 2916 aa1.35□□□□□ -2.19
HMGB1P12-201ENST00000438594 NDUFA1O15239 70 aa1.35□□□□□ -2.19
HMGB1P12-201ENST00000438594 H1FX-AS1Q4G0G2 97 aa1.35□□□□□ -2.19
HMGB1P12-201ENST00000438594 DEFB124Q8NES8 71 aa1.35□□□□□ -2.19
HMGB1P12-201ENST00000438594 ZANQ9Y493 2812 aa1.35□□□□□ -2.19
HMGB1P12-201ENST00000438594 HYDINQ4G0P3 5121 aa1.35□□□□□ -2.19
HMGB1P12-201ENST00000438594 AKAP9Q99996 3911 aa1.35□□□□□ -2.19
HMGB1P12-201ENST00000438594 COL6A6A6NMZ7 2263 aa1.35□□□□□ -2.19
HMGB1P12-201ENST00000438594 AHNAK2Q8IVF2 5795 aa1.34□□□□□ -2.19
HMGB1P12-201ENST00000438594 SONP18583 2426 aaKnown RBP1.34□□□□□ -2.19
HMGB1P12-201ENST00000438594 K7EIM0 57 aa1.34□□□□□ -2.19
HMGB1P12-201ENST00000438594 IAPPP10997 89 aa1.34□□□□□ -2.19
HMGB1P12-201ENST00000438594 RPL39P5Q59GN2 51 aa1.34□□□□□ -2.19
HMGB1P12-201ENST00000438594 Q5VSD8 79 aa1.34□□□□□ -2.19
HMGB1P12-201ENST00000438594 APLNQ9ULZ1 77 aa1.34□□□□□ -2.19
HMGB1P12-201ENST00000438594 PRRC2CQ9Y520 2896 aaKnown RBP1.34□□□□□ -2.2
HMGB1P12-201ENST00000438594 COL12A1Q99715 3063 aa1.34□□□□□ -2.2
HMGB1P12-201ENST00000438594 ROS1P08922 2347 aa1.33□□□□□ -2.2
HMGB1P12-201ENST00000438594 TENM2Q9NT68 2774 aa1.33□□□□□ -2.2
HMGB1P12-201ENST00000438594 SPTBN2O15020 2390 aa1.33□□□□□ -2.2
HMGB1P12-201ENST00000438594 A8MTW9 85 aa1.33□□□□□ -2.2
HMGB1P12-201ENST00000438594 CUBNO60494 3623 aa1.33□□□□□ -2.2
HMGB1P12-201ENST00000438594 PCNX1Q96RV3 2341 aa1.33□□□□□ -2.2
HMGB1P12-201ENST00000438594 ANK3Q12955 4377 aaKnown RBP1.33□□□□□ -2.2
HMGB1P12-201ENST00000438594 MTORP42345 2549 aa1.32□□□□□ -2.2
HMGB1P12-201ENST00000438594 A0A0D9SG42 100 aa1.32□□□□□ -2.2
HMGB1P12-201ENST00000438594 J3QKU1 62 aa1.32□□□□□ -2.2
HMGB1P12-201ENST00000438594 WFDC13Q8IUB5 93 aa1.32□□□□□ -2.2
HMGB1P12-201ENST00000438594 DEFB108BQ8NET1 73 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms