RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 HIGD2AQ9BW72 106 aa3.67□□□□□ -1.82
SPEN-202ENST00000438066 UBL5Q9BZL1 73 aa3.67□□□□□ -1.82
SPEN-202ENST00000438066 SPRR1BP22528 89 aa3.67□□□□□ -1.82
SPEN-202ENST00000438066 PKD1P98161 4303 aa3.66□□□□□ -1.82
SPEN-202ENST00000438066 FAT2Q9NYQ8 4349 aa3.66□□□□□ -1.82
SPEN-202ENST00000438066 IGKV3D-7A0A0C4DH55 119 aa3.66□□□□□ -1.82
SPEN-202ENST00000438066 HIST1H4AP62805 103 aaKnown RBP3.66□□□□□ -1.82
SPEN-202ENST00000438066 DNAH11Q96DT5 4516 aa3.66□□□□□ -1.82
SPEN-202ENST00000438066 LCE6AA0A183 80 aa3.65□□□□□ -1.82
SPEN-202ENST00000438066 A0A1B0GW54 56 aa3.65□□□□□ -1.82
SPEN-202ENST00000438066 A0A1W2PNM2 257 aa3.65□□□□□ -1.82
SPEN-202ENST00000438066 C1orf137Q5JT78 98 aa3.65□□□□□ -1.82
SPEN-202ENST00000438066 ADM2Q7Z4H4 148 aa3.65□□□□□ -1.82
SPEN-202ENST00000438066 DPH3Q96FX2 82 aa3.65□□□□□ -1.82
SPEN-202ENST00000438066 DNAH8Q96JB1 4490 aa3.65□□□□□ -1.83
SPEN-202ENST00000438066 FAM236AA0A1B0GUQ0 79 aa3.64□□□□□ -1.83
SPEN-202ENST00000438066 FAM236BA0A1B0GV22 79 aa3.64□□□□□ -1.83
SPEN-202ENST00000438066 Q6ZSA8 131 aa3.64□□□□□ -1.83
SPEN-202ENST00000438066 SPRR4Q96PI1 79 aa3.64□□□□□ -1.83
SPEN-202ENST00000438066 F8WEM9 126 aa3.64□□□□□ -1.83
SPEN-202ENST00000438066 PSORS1C2Q9UIG4 136 aa3.64□□□□□ -1.83
SPEN-202ENST00000438066 DNAH5Q8TE73 4624 aa3.63□□□□□ -1.83
SPEN-202ENST00000438066 A0A087WVE0 104 aa3.63□□□□□ -1.83
SPEN-202ENST00000438066 A8MWP4 228 aa3.63□□□□□ -1.83
SPEN-202ENST00000438066 LINC00313P59037 77 aa3.63□□□□□ -1.83
SPEN-202ENST00000438066 IGFL1Q6UW32 110 aa3.63□□□□□ -1.83
SPEN-202ENST00000438066 HYDINQ4G0P3 5121 aa3.62□□□□□ -1.83
SPEN-202ENST00000438066 A6NED7 52 aa3.62□□□□□ -1.83
SPEN-202ENST00000438066 CRYGAP11844 174 aa3.62□□□□□ -1.83
SPEN-202ENST00000438066 HAMPP81172 84 aa3.61□□□□□ -1.83
SPEN-202ENST00000438066 SACSQ9NZJ4 4579 aa3.61□□□□□ -1.83
SPEN-202ENST00000438066 A0A0G2JQZ4 141 aa3.61□□□□□ -1.83
SPEN-202ENST00000438066 KRTAP10-1P60331 282 aa3.61□□□□□ -1.83
SPEN-202ENST00000438066 PKHD1P08F94 4074 aa3.6□□□□□ -1.83
SPEN-202ENST00000438066 IGLV7-43P04211 117 aa3.6□□□□□ -1.83
SPEN-202ENST00000438066 NREPQ16612 68 aa3.6□□□□□ -1.83
SPEN-202ENST00000438066 SCXQ7RTU7 201 aa3.6□□□□□ -1.83
SPEN-202ENST00000438066 ATOX1O00244 68 aa3.59□□□□□ -1.83
SPEN-202ENST00000438066 A8MUU9 505 aa3.58□□□□□ -1.84
SPEN-202ENST00000438066 IGKV4-1P06312 121 aa3.58□□□□□ -1.84
SPEN-202ENST00000438066 A0A087WSZ3 146 aa3.57□□□□□ -1.84
SPEN-202ENST00000438066 CCDC179H3BU77 68 aa3.57□□□□□ -1.84
SPEN-202ENST00000438066 RPL37AP61513 92 aaKnown RBP3.57□□□□□ -1.84
SPEN-202ENST00000438066 LRP1BQ9NZR2 4599 aa3.56□□□□□ -1.84
SPEN-202ENST00000438066 PMAIP1Q13794 54 aa3.56□□□□□ -1.84
SPEN-202ENST00000438066 A0A1B0GVY2 172 aa3.56□□□□□ -1.84
SPEN-202ENST00000438066 SERP2Q8N6R1 65 aa3.56□□□□□ -1.84
SPEN-202ENST00000438066 UQCRQO14949 82 aa3.55□□□□□ -1.84
SPEN-202ENST00000438066 COX7CP15954 63 aa3.55□□□□□ -1.84
SPEN-202ENST00000438066 C9orf153Q5TBE3 101 aa3.55□□□□□ -1.84
SPEN-202ENST00000438066 MOBPQ13875 183 aa3.54□□□□□ -1.84
SPEN-202ENST00000438066 K7EQZ3 153 aa3.53□□□□□ -1.84
SPEN-202ENST00000438066 LINC00472Q9H8W2 130 aa3.53□□□□□ -1.84
SPEN-202ENST00000438066 VPS13BQ7Z7G8 4022 aa3.53□□□□□ -1.84
SPEN-202ENST00000438066 KMT2CQ8NEZ4 4911 aaKnown RBP3.52□□□□□ -1.85
SPEN-202ENST00000438066 TRAV7A0A075B6U4 112 aa3.52□□□□□ -1.85
SPEN-202ENST00000438066 SMIM20Q8N5G0 67 aa3.52□□□□□ -1.85
SPEN-202ENST00000438066 Q96NJ1 140 aa3.52□□□□□ -1.85
SPEN-202ENST00000438066 RYR2Q92736 4967 aa3.51□□□□□ -1.85
SPEN-202ENST00000438066 FAM229BQ4G0N7 80 aa3.5□□□□□ -1.85
SPEN-202ENST00000438066 SS18L2Q9UHA2 77 aa3.5□□□□□ -1.85
SPEN-202ENST00000438066 KRTAP13-2Q52LG2 175 aa3.5□□□□□ -1.85
SPEN-202ENST00000438066 SPINT4Q6UDR6 99 aa3.5□□□□□ -1.85
SPEN-202ENST00000438066 PRR15Q8IV56 129 aa3.5□□□□□ -1.85
SPEN-202ENST00000438066 CYSTM1Q9H1C7 97 aa3.5□□□□□ -1.85
SPEN-202ENST00000438066 DYNC1H1Q14204 4646 aaKnown RBP3.49□□□□□ -1.85
SPEN-202ENST00000438066 HCG22E2RYF7 251 aa3.49□□□□□ -1.85
SPEN-202ENST00000438066 J3KT08 172 aa3.49□□□□□ -1.85
SPEN-202ENST00000438066 HRCT1Q6UXD1 115 aa3.49□□□□□ -1.85
SPEN-202ENST00000438066 SSBP3-AS1Q7Z2R9 100 aa3.49□□□□□ -1.85
SPEN-202ENST00000438066 APOBP04114 4563 aaKnown RBP3.48□□□□□ -1.85
SPEN-202ENST00000438066 KRTAP10-4P60372 401 aaPredicted RBP3.47□□□□□ -1.85
SPEN-202ENST00000438066 KLKP1Q107X0 134 aa3.47□□□□□ -1.85
SPEN-202ENST00000438066 ASB16-AS1Q495Z4 193 aa3.47□□□□□ -1.85
SPEN-202ENST00000438066 C20orf197Q8N268 126 aa3.47□□□□□ -1.85
SPEN-202ENST00000438066 MMP24-AS1A0A0U1RRL7 71 aa3.46□□□□□ -1.86
SPEN-202ENST00000438066 SPINK6Q6UWN8 80 aa3.46□□□□□ -1.86
SPEN-202ENST00000438066 FAM236DA0A1B0GTK5 79 aa3.45□□□□□ -1.86
SPEN-202ENST00000438066 FAM236CP0DP71 79 aa3.45□□□□□ -1.86
SPEN-202ENST00000438066 Q5XG85 94 aa3.45□□□□□ -1.86
SPEN-202ENST00000438066 WFDC13Q8IUB5 93 aa3.45□□□□□ -1.86
SPEN-202ENST00000438066 NDUFB1O75438 58 aa3.44□□□□□ -1.86
SPEN-202ENST00000438066 SMR3BP02814 79 aaPredicted RBP3.44□□□□□ -1.86
SPEN-202ENST00000438066 CASC2Q6XLA1 102 aa3.44□□□□□ -1.86
SPEN-202ENST00000438066 TMEM254Q8TBM7 123 aa3.44□□□□□ -1.86
SPEN-202ENST00000438066 H7BZZ5 65 aa3.44□□□□□ -1.86
SPEN-202ENST00000438066 TMEM258P61165 79 aa3.44□□□□□ -1.86
SPEN-202ENST00000438066 FAT1Q14517 4588 aa3.43□□□□□ -1.86
SPEN-202ENST00000438066 SNURFQ9Y675 71 aa3.43□□□□□ -1.86
SPEN-202ENST00000438066 hDV103S1A0JD37 113 aa3.42□□□□□ -1.86
SPEN-202ENST00000438066 A8MUN3 132 aa3.42□□□□□ -1.86
SPEN-202ENST00000438066 KRTAP25-1Q3LHN0 102 aa3.42□□□□□ -1.86
SPEN-202ENST00000438066 RYR3Q15413 4870 aa3.41□□□□□ -1.86
SPEN-202ENST00000438066 NDUFC1O43677 76 aa3.41□□□□□ -1.86
SPEN-202ENST00000438066 ZCCHC13Q8WW36 166 aaKnown RBP3.41□□□□□ -1.86
SPEN-202ENST00000438066 LIMD2Q9BT23 127 aa3.41□□□□□ -1.86
SPEN-202ENST00000438066 R4GN34 69 aa3.41□□□□□ -1.86
SPEN-202ENST00000438066 C1orf64Q8NEQ6 169 aa3.4□□□□□ -1.87
SPEN-202ENST00000438066 SPINK1P00995 79 aa3.39□□□□□ -1.87
SPEN-202ENST00000438066 RPS29P62273 56 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms