RNA–Protein interactions for RNA: ENST00000437152.7

SH2D3A-202, Transcript of SH2 domain containing 3A, humanhuman

TSL 2 BASIC

Gene SH2D3A, Length 2,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-202ENST00000437152 SSBP3-AS1Q7Z2R9 100 aa13.76□□□□□ -0.21
SH2D3A-202ENST00000437152 C8orf17Q9NRJ1 99 aa13.76□□□□□ -0.21
SH2D3A-202ENST00000437152 CDK2AP2O75956 126 aa13.74□□□□□ -0.21
SH2D3A-202ENST00000437152 TP53AIP1Q9HCN2 124 aa13.73□□□□□ -0.21
SH2D3A-202ENST00000437152 C4orf26Q17RF5 130 aa13.71□□□□□ -0.21
SH2D3A-202ENST00000437152 CYP4F30PQ9H0H9 118 aa13.71□□□□□ -0.21
SH2D3A-202ENST00000437152 EPPK1P58107 5090 aaKnown RBP13.7□□□□□ -0.22
SH2D3A-202ENST00000437152 FP248Q71RG6 208 aaPredicted RBP13.7□□□□□ -0.22
SH2D3A-202ENST00000437152 IGHV6-1A0A0B4J1U7 121 aa13.68□□□□□ -0.22
SH2D3A-202ENST00000437152 C1orf64Q8NEQ6 169 aa13.66□□□□□ -0.22
SH2D3A-202ENST00000437152 SPANXA2-OT1Q8N9U9 137 aa13.65□□□□□ -0.22
SH2D3A-202ENST00000437152 FAM229BQ4G0N7 80 aa13.62□□□□□ -0.23
SH2D3A-202ENST00000437152 MRPL34Q9BQ48 92 aaKnown RBP13.62□□□□□ -0.23
SH2D3A-202ENST00000437152 APOBP04114 4563 aaKnown RBP13.61□□□□□ -0.23
SH2D3A-202ENST00000437152 A0A087X002 238 aa13.54□□□□□ -0.24
SH2D3A-202ENST00000437152 SPINK6Q6UWN8 80 aa13.54□□□□□ -0.24
SH2D3A-202ENST00000437152 NDUFS5O43920 106 aa13.53□□□□□ -0.24
SH2D3A-202ENST00000437152 KRTAP13-2Q52LG2 175 aa13.53□□□□□ -0.24
SH2D3A-202ENST00000437152 NOTCH2NLQ7Z3S9 236 aa13.53□□□□□ -0.24
SH2D3A-202ENST00000437152 PRR4Q16378 134 aa13.52□□□□□ -0.24
SH2D3A-202ENST00000437152 C8orf87E5RJ46 101 aa13.51□□□□□ -0.25
SH2D3A-202ENST00000437152 KRTAP1-4P0C5Y4 121 aa13.47□□□□□ -0.25
SH2D3A-202ENST00000437152 IGLV7-46A0A075B6I9 117 aa13.45□□□□□ -0.26
SH2D3A-202ENST00000437152 MPLKIPQ8TAP9 179 aa13.44□□□□□ -0.26
SH2D3A-202ENST00000437152 HSPG2P98160 4391 aa13.44□□□□□ -0.26
SH2D3A-202ENST00000437152 VPS13BQ7Z7G8 4022 aa13.43□□□□□ -0.26
SH2D3A-202ENST00000437152 SMR3BP02814 79 aaPredicted RBP13.41□□□□□ -0.26
SH2D3A-202ENST00000437152 Q1T7F1 81 aa13.4□□□□□ -0.26
SH2D3A-202ENST00000437152 C1orf195Q5TG92 126 aa13.4□□□□□ -0.26
SH2D3A-202ENST00000437152 FAT1Q14517 4588 aa13.4□□□□□ -0.27
SH2D3A-202ENST00000437152 KIAA1109Q2LD37 5005 aa13.39□□□□□ -0.27
SH2D3A-202ENST00000437152 LIMD2Q9BT23 127 aa13.39□□□□□ -0.27
SH2D3A-202ENST00000437152 RYR1P21817 5038 aa13.37□□□□□ -0.27
SH2D3A-202ENST00000437152 LINC00313P59037 77 aa13.36□□□□□ -0.27
SH2D3A-202ENST00000437152 LOC101927531A0A1B0GV80 90 aa13.35□□□□□ -0.27
SH2D3A-202ENST00000437152 PCOTHQ58A44 107 aa13.35□□□□□ -0.27
SH2D3A-202ENST00000437152 KRTAP13-3Q3SY46 172 aa13.35□□□□□ -0.27
SH2D3A-202ENST00000437152 PLA2G1BP04054 148 aaKnown RBP13.34□□□□□ -0.27
SH2D3A-202ENST00000437152 Q5W150 140 aa13.3□□□□□ -0.28
SH2D3A-202ENST00000437152 Q8N9P0 234 aaPredicted RBP13.29□□□□□ -0.28
SH2D3A-202ENST00000437152 V9GYY9 64 aa13.29□□□□□ -0.28
SH2D3A-202ENST00000437152 BIRC6Q9NR09 4857 aa13.29□□□□□ -0.28
SH2D3A-202ENST00000437152 C4orf48Q5BLP8 95 aa13.29□□□□□ -0.28
SH2D3A-202ENST00000437152 TYMSOSQ8TAI1 123 aa13.29□□□□□ -0.28
SH2D3A-202ENST00000437152 SPINK1P00995 79 aa13.27□□□□□ -0.28
SH2D3A-202ENST00000437152 COA5Q86WW8 74 aa13.24□□□□□ -0.29
SH2D3A-202ENST00000437152 FAM229AH3BQW9 127 aa13.23□□□□□ -0.29
SH2D3A-202ENST00000437152 KRTAP17-1Q9BYP8 105 aa13.21□□□□□ -0.29
SH2D3A-202ENST00000437152 PRO0628Q9UI54 55 aa13.2□□□□□ -0.3
SH2D3A-202ENST00000437152 KRTAP16-1A8MUX0 517 aa13.19□□□□□ -0.3
SH2D3A-202ENST00000437152 RPS29P62273 56 aaKnown RBP13.18□□□□□ -0.3
SH2D3A-202ENST00000437152 KRTAP10-4P60372 401 aaPredicted RBP13.17□□□□□ -0.3
SH2D3A-202ENST00000437152 Q5VSD8 79 aa13.16□□□□□ -0.3
SH2D3A-202ENST00000437152 SPAG11AQ6PDA7 123 aa13.15□□□□□ -0.3
SH2D3A-202ENST00000437152 Q8N1X5 172 aa13.14□□□□□ -0.31
SH2D3A-202ENST00000437152 LINC00304Q8N9R0 145 aa13.12□□□□□ -0.31
SH2D3A-202ENST00000437152 PRR26Q8N8Z3 221 aa13.1□□□□□ -0.31
SH2D3A-202ENST00000437152 BRK1Q8WUW1 75 aa13.1□□□□□ -0.31
SH2D3A-202ENST00000437152 PSPHP1O15172 72 aa13.1□□□□□ -0.31
SH2D3A-202ENST00000437152 HRES1P13985 223 aa13.08□□□□□ -0.31
SH2D3A-202ENST00000437152 IGKV2-30P06310 120 aa13.06□□□□□ -0.32
SH2D3A-202ENST00000437152 A8MUN3 132 aa13.05□□□□□ -0.32
SH2D3A-202ENST00000437152 HERC2O95714 4834 aa13.03□□□□□ -0.32
SH2D3A-202ENST00000437152 PKHD1L1Q86WI1 4243 aa13.03□□□□□ -0.32
SH2D3A-202ENST00000437152 ACYP2P14621 99 aa13□□□□□ -0.33
SH2D3A-202ENST00000437152 Q5VV11 94 aa13□□□□□ -0.33
SH2D3A-202ENST00000437152 KRTAP4-5Q9BYR2 181 aa12.99□□□□□ -0.33
SH2D3A-202ENST00000437152 RETNLBQ9BQ08 111 aa12.98□□□□□ -0.33
SH2D3A-202ENST00000437152 DMAC1Q96GE9 116 aa12.97□□□□□ -0.33
SH2D3A-202ENST00000437152 PRR15LQ9BU68 103 aa12.95□□□□□ -0.34
SH2D3A-202ENST00000437152 LINC01558Q9Y6Z2 57 aa12.94□□□□□ -0.34
SH2D3A-202ENST00000437152 FLG2Q5D862 2391 aaPredicted RBP12.91□□□□□ -0.34
SH2D3A-202ENST00000437152 Q75L30 129 aa12.89□□□□□ -0.35
SH2D3A-202ENST00000437152 LRP1Q07954 4544 aaKnown RBP12.88□□□□□ -0.35
SH2D3A-202ENST00000437152 MYCBP2O75592 4640 aa12.88□□□□□ -0.35
SH2D3A-202ENST00000437152 ABCA13Q86UQ4 5058 aa12.85□□□□□ -0.35
SH2D3A-202ENST00000437152 CHKB-CPT1BH3BT56 60 aa12.85□□□□□ -0.35
SH2D3A-202ENST00000437152 IGKV2D-30A0A075B6S6 120 aa12.84□□□□□ -0.35
SH2D3A-202ENST00000437152 FAT3Q8TDW7 4589 aa12.81□□□□□ -0.36
SH2D3A-202ENST00000437152 C7orf65Q6ZTY9 151 aa12.76□□□□□ -0.37
SH2D3A-202ENST00000437152 C20orf166-AS1Q96NR2 134 aa12.74□□□□□ -0.37
SH2D3A-202ENST00000437152 A8MUU9 505 aa12.73□□□□□ -0.37
SH2D3A-202ENST00000437152 TNXBP22105 4242 aa12.72□□□□□ -0.37
SH2D3A-202ENST00000437152 A6NED7 52 aa12.69□□□□□ -0.38
SH2D3A-202ENST00000437152 C9orf92A6NGG3 77 aa12.66□□□□□ -0.38
SH2D3A-202ENST00000437152 PCLOQ9Y6V0 5065 aa12.64□□□□□ -0.39
SH2D3A-202ENST00000437152 KRTAP10-8P60410 259 aa12.61□□□□□ -0.39
SH2D3A-202ENST00000437152 LCA10Q71F78 164 aa12.6□□□□□ -0.39
SH2D3A-202ENST00000437152 CDC42SE1Q9NRR8 79 aa12.6□□□□□ -0.39
SH2D3A-202ENST00000437152 A8MU10 97 aa12.58□□□□□ -0.4
SH2D3A-202ENST00000437152 MT1HL1P0DM35 61 aa12.58□□□□□ -0.4
SH2D3A-202ENST00000437152 DMBT1Q9UGM3 2413 aaPredicted RBP12.53□□□□□ -0.4
SH2D3A-202ENST00000437152 SPINK7P58062 85 aa12.53□□□□□ -0.4
SH2D3A-202ENST00000437152 ATP11AUNQ6ZP68 121 aa12.52□□□□□ -0.4
SH2D3A-202ENST00000437152 A0A1B0GU69 56 aa12.51□□□□□ -0.41
SH2D3A-202ENST00000437152 J3QL48 77 aa12.46□□□□□ -0.41
SH2D3A-202ENST00000437152 PMAIP1Q13794 54 aa12.41□□□□□ -0.42
SH2D3A-202ENST00000437152 SPTSSBQ8NFR3 76 aa12.4□□□□□ -0.42
SH2D3A-202ENST00000437152 KRTAP3-1Q9BYR8 98 aa12.32□□□□□ -0.44
SH2D3A-202ENST00000437152 UQCR11O14957 56 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms