RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 COX7CP15954 63 aa12.2□□□□□ -0.46
YBX1-203ENST00000436427 CCDC179H3BU77 68 aa12.18□□□□□ -0.46
YBX1-203ENST00000436427 Q8N9L7 120 aa12.17□□□□□ -0.46
YBX1-203ENST00000436427 ASB16-AS1Q495Z4 193 aa12.16□□□□□ -0.46
YBX1-203ENST00000436427 DEFB116Q30KQ4 102 aa12.15□□□□□ -0.46
YBX1-203ENST00000436427 DSCR10P59022 87 aa12.14□□□□□ -0.47
YBX1-203ENST00000436427 DMBT1Q9UGM3 2413 aaPredicted RBP12.13□□□□□ -0.47
YBX1-203ENST00000436427 J3KT08 172 aa12.12□□□□□ -0.47
YBX1-203ENST00000436427 C1orf195Q5TG92 126 aa12.12□□□□□ -0.47
YBX1-203ENST00000436427 Q96NJ1 140 aa12.12□□□□□ -0.47
YBX1-203ENST00000436427 LINC00472Q9H8W2 130 aa12.12□□□□□ -0.47
YBX1-203ENST00000436427 RETNLBQ9BQ08 111 aa12.11□□□□□ -0.47
YBX1-203ENST00000436427 TRAV7A0A075B6U4 112 aa12.11□□□□□ -0.47
YBX1-203ENST00000436427 K7EQZ3 153 aa12.09□□□□□ -0.47
YBX1-203ENST00000436427 A8MWP4 228 aa12.03□□□□□ -0.48
YBX1-203ENST00000436427 HCG22E2RYF7 251 aa12.03□□□□□ -0.48
YBX1-203ENST00000436427 NDUFB1O75438 58 aa12.02□□□□□ -0.48
YBX1-203ENST00000436427 PRR15Q8IV56 129 aa11.99□□□□□ -0.49
YBX1-203ENST00000436427 PRR4Q16378 134 aa11.95□□□□□ -0.5
YBX1-203ENST00000436427 FP248Q71RG6 208 aaPredicted RBP11.95□□□□□ -0.5
YBX1-203ENST00000436427 OCR1Q9BZK8 76 aa11.93□□□□□ -0.5
YBX1-203ENST00000436427 C20orf197Q8N268 126 aa11.92□□□□□ -0.5
YBX1-203ENST00000436427 IGHV6-1A0A0B4J1U7 121 aa11.91□□□□□ -0.5
YBX1-203ENST00000436427 A0A1B0GVX0 72 aa11.91□□□□□ -0.5
YBX1-203ENST00000436427 IGLV7-46A0A075B6I9 117 aa11.9□□□□□ -0.5
YBX1-203ENST00000436427 CASC2Q6XLA1 102 aa11.9□□□□□ -0.5
YBX1-203ENST00000436427 WFDC13Q8IUB5 93 aa11.9□□□□□ -0.5
YBX1-203ENST00000436427 KLKP1Q107X0 134 aa11.85□□□□□ -0.51
YBX1-203ENST00000436427 MMP24-AS1A0A0U1RRL7 71 aa11.82□□□□□ -0.52
YBX1-203ENST00000436427 C9orf92A6NGG3 77 aa11.82□□□□□ -0.52
YBX1-203ENST00000436427 TMEM254Q8TBM7 123 aa11.82□□□□□ -0.52
YBX1-203ENST00000436427 HERC1Q15751 4861 aa11.82□□□□□ -0.52
YBX1-203ENST00000436427 TMEM258P61165 79 aa11.81□□□□□ -0.52
YBX1-203ENST00000436427 NDUFC1O43677 76 aa11.81□□□□□ -0.52
YBX1-203ENST00000436427 LINC00313P59037 77 aa11.81□□□□□ -0.52
YBX1-203ENST00000436427 NOTCH2NLQ7Z3S9 236 aa11.81□□□□□ -0.52
YBX1-203ENST00000436427 hDV103S1A0JD37 113 aa11.8□□□□□ -0.52
YBX1-203ENST00000436427 C8orf17Q9NRJ1 99 aa11.8□□□□□ -0.52
YBX1-203ENST00000436427 C8orf87E5RJ46 101 aa11.79□□□□□ -0.52
YBX1-203ENST00000436427 C5orf47Q569G3 176 aa11.79□□□□□ -0.52
YBX1-203ENST00000436427 SNURFQ9Y675 71 aa11.77□□□□□ -0.52
YBX1-203ENST00000436427 KRTAP13-3Q3SY46 172 aa11.76□□□□□ -0.53
YBX1-203ENST00000436427 CYSTM1Q9H1C7 97 aa11.76□□□□□ -0.53
YBX1-203ENST00000436427 A0A0U1RQV1 116 aa11.74□□□□□ -0.53
YBX1-203ENST00000436427 MP68P56378 58 aa11.72□□□□□ -0.53
YBX1-203ENST00000436427 TPRXLQ17RH7 258 aa11.72□□□□□ -0.53
YBX1-203ENST00000436427 TP53AIP1Q9HCN2 124 aa11.71□□□□□ -0.53
YBX1-203ENST00000436427 H7BZZ5 65 aa11.69□□□□□ -0.54
YBX1-203ENST00000436427 MRPL34Q9BQ48 92 aaKnown RBP11.68□□□□□ -0.54
YBX1-203ENST00000436427 KRTAP16-1A8MUX0 517 aa11.67□□□□□ -0.54
YBX1-203ENST00000436427 H3BPC8 53 aa11.66□□□□□ -0.54
YBX1-203ENST00000436427 FAM236DA0A1B0GTK5 79 aa11.64□□□□□ -0.55
YBX1-203ENST00000436427 FAM236CP0DP71 79 aa11.64□□□□□ -0.55
YBX1-203ENST00000436427 LPAP08519 4548 aa11.64□□□□□ -0.55
YBX1-203ENST00000436427 H0Y9P7 68 aa11.63□□□□□ -0.55
YBX1-203ENST00000436427 NDUFS5O43920 106 aa11.63□□□□□ -0.55
YBX1-203ENST00000436427 ATP5EP56381 51 aaPredicted RBP11.62□□□□□ -0.55
YBX1-203ENST00000436427 XP32Q5T750 250 aa11.62□□□□□ -0.55
YBX1-203ENST00000436427 HMCN2Q8NDA2 5059 aa11.62□□□□□ -0.55
YBX1-203ENST00000436427 TRAV22A0A0B4J277 110 aa11.6□□□□□ -0.55
YBX1-203ENST00000436427 ZCCHC13Q8WW36 166 aaKnown RBP11.59□□□□□ -0.55
YBX1-203ENST00000436427 Q8N9P0 234 aaPredicted RBP11.56□□□□□ -0.56
YBX1-203ENST00000436427 LINC00208Q96KT6 92 aa11.56□□□□□ -0.56
YBX1-203ENST00000436427 C20orf166-AS1Q96NR2 134 aa11.55□□□□□ -0.56
YBX1-203ENST00000436427 A8MUU9 505 aa11.54□□□□□ -0.56
YBX1-203ENST00000436427 Q75L30 129 aa11.52□□□□□ -0.57
YBX1-203ENST00000436427 RPS28P62857 69 aaKnown RBP11.5□□□□□ -0.57
YBX1-203ENST00000436427 C1orf64Q8NEQ6 169 aa11.5□□□□□ -0.57
YBX1-203ENST00000436427 RPL37P61927 97 aaKnown RBP11.5□□□□□ -0.57
YBX1-203ENST00000436427 LRP2P98164 4655 aa11.49□□□□□ -0.57
YBX1-203ENST00000436427 SERP1Q9Y6X1 66 aa11.45□□□□□ -0.58
YBX1-203ENST00000436427 ATP11AUNQ6ZP68 121 aa11.43□□□□□ -0.58
YBX1-203ENST00000436427 LOC101927531A0A1B0GV80 90 aa11.39□□□□□ -0.59
YBX1-203ENST00000436427 SPANXA2-OT1Q8N9U9 137 aa11.37□□□□□ -0.59
YBX1-203ENST00000436427 PCOTHQ58A44 107 aa11.35□□□□□ -0.59
YBX1-203ENST00000436427 Q5W150 140 aa11.35□□□□□ -0.59
YBX1-203ENST00000436427 SEC61BP60468 96 aaKnown RBP11.35□□□□□ -0.59
YBX1-203ENST00000436427 CYP4F30PQ9H0H9 118 aa11.32□□□□□ -0.6
YBX1-203ENST00000436427 MUC17Q685J3 4493 aa11.22□□□□□ -0.61
YBX1-203ENST00000436427 IGKV2D-30A0A075B6S6 120 aa11.19□□□□□ -0.62
YBX1-203ENST00000436427 SMIM26A0A096LP01 95 aa11.19□□□□□ -0.62
YBX1-203ENST00000436427 IGKV2-30P06310 120 aa11.19□□□□□ -0.62
YBX1-203ENST00000436427 UBR4Q5T4S7 5183 aa11.15□□□□□ -0.62
YBX1-203ENST00000436427 SPINK7P58062 85 aa11.14□□□□□ -0.63
YBX1-203ENST00000436427 C7orf65Q6ZTY9 151 aa11.14□□□□□ -0.63
YBX1-203ENST00000436427 KRTAP4-1Q9BYQ7 146 aa11.09□□□□□ -0.63
YBX1-203ENST00000436427 HRES1P13985 223 aa11.04□□□□□ -0.64
YBX1-203ENST00000436427 COA5Q86WW8 74 aa11.01□□□□□ -0.65
YBX1-203ENST00000436427 MUC2Q02817 5179 aa10.99□□□□□ -0.65
YBX1-203ENST00000436427 RNF213Q63HN8 5207 aa10.98□□□□□ -0.65
YBX1-203ENST00000436427 ACYP2P14621 99 aa10.97□□□□□ -0.65
YBX1-203ENST00000436427 DMAC1Q96GE9 116 aa10.95□□□□□ -0.66
YBX1-203ENST00000436427 V9GYY9 64 aa10.91□□□□□ -0.66
YBX1-203ENST00000436427 C4orf26Q17RF5 130 aa10.9□□□□□ -0.66
YBX1-203ENST00000436427 MPLKIPQ8TAP9 179 aa10.9□□□□□ -0.66
YBX1-203ENST00000436427 RBM12B-AS1Q9P1G2 102 aa10.88□□□□□ -0.67
YBX1-203ENST00000436427 Q1T7F1 81 aa10.87□□□□□ -0.67
YBX1-203ENST00000436427 CHKB-CPT1BH3BT56 60 aa10.84□□□□□ -0.67
YBX1-203ENST00000436427 A8MUN3 132 aa10.83□□□□□ -0.68
YBX1-203ENST00000436427 COX6B2Q6YFQ2 88 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms