RNA–Protein interactions for RNA: ENST00000428761.1

LINC00348-201, long intergenic non-protein coding RNA 348, humanhuman

TSL 3 BASIC

Gene LINC00348, Length 948 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00348-201ENST00000428761 WFDC10AQ9H1F0 79 aa2.64□□□□□ -1.99
LINC00348-201ENST00000428761 A0A1B0GUT8 65 aa2.63□□□□□ -1.99
LINC00348-201ENST00000428761 SNRPGP62308 76 aaKnown RBP2.63□□□□□ -1.99
LINC00348-201ENST00000428761 TMEM14CQ9P0S9 112 aa2.63□□□□□ -1.99
LINC00348-201ENST00000428761 TRAV1-2A0A0B4J238 106 aa2.62□□□□□ -1.99
LINC00348-201ENST00000428761 INE1O15225 51 aa2.62□□□□□ -1.99
LINC00348-201ENST00000428761 NREPQ16612 68 aa2.62□□□□□ -1.99
LINC00348-201ENST00000428761 Q6ZRN7 208 aaPredicted RBP2.62□□□□□ -1.99
LINC00348-201ENST00000428761 WFDC9Q8NEX5 89 aa2.62□□□□□ -1.99
LINC00348-201ENST00000428761 F8VRH5 84 aa2.61□□□□□ -1.99
LINC00348-201ENST00000428761 M0R2N4 97 aa2.61□□□□□ -1.99
LINC00348-201ENST00000428761 Q5VSD8 79 aa2.61□□□□□ -1.99
LINC00348-201ENST00000428761 Q86TA4 180 aa2.61□□□□□ -1.99
LINC00348-201ENST00000428761 R4GMQ9 66 aa2.61□□□□□ -1.99
LINC00348-201ENST00000428761 SMIM27A0A1W2PRY6 76 aa2.6□□□□□ -1.99
LINC00348-201ENST00000428761 SERF2P84101 59 aa2.6□□□□□ -1.99
LINC00348-201ENST00000428761 AMELXQ99217 191 aa2.6□□□□□ -1.99
LINC00348-201ENST00000428761 V9GYV3 84 aa2.6□□□□□ -1.99
LINC00348-201ENST00000428761 SPTBP11277 2137 aa2.6□□□□□ -1.99
LINC00348-201ENST00000428761 CTXND1A0A1B0GTU2 59 aa2.59□□□□□ -1.99
LINC00348-201ENST00000428761 LINC00322Q6ZN03 302 aaPredicted RBP2.59□□□□□ -1.99
LINC00348-201ENST00000428761 COX7B2Q8TF08 81 aa2.59□□□□□ -1.99
LINC00348-201ENST00000428761 TIMM8BQ9Y5J9 83 aaPredicted RBP2.59□□□□□ -1.99
LINC00348-201ENST00000428761 M0R135 149 aa2.58□□□□□ -2
LINC00348-201ENST00000428761 NDUFB1O75438 58 aa2.58□□□□□ -2
LINC00348-201ENST00000428761 ENHOQ6UWT2 76 aa2.58□□□□□ -2
LINC00348-201ENST00000428761 BRD3OSQ6XYD6 125 aa2.58□□□□□ -2
LINC00348-201ENST00000428761 TMEM263Q8WUH6 116 aaKnown RBP2.58□□□□□ -2
LINC00348-201ENST00000428761 WFDC6Q9BQY6 131 aa2.58□□□□□ -2
LINC00348-201ENST00000428761 UBL5Q9BZL1 73 aa2.58□□□□□ -2
LINC00348-201ENST00000428761 LINC01558Q9Y6Z2 57 aa2.58□□□□□ -2
LINC00348-201ENST00000428761 SPINK4O60575 86 aa2.57□□□□□ -2
LINC00348-201ENST00000428761 IGKV4-1P06312 121 aa2.57□□□□□ -2
LINC00348-201ENST00000428761 CCL3L1P16619 93 aa2.57□□□□□ -2
LINC00348-201ENST00000428761 PLNP26678 52 aa2.57□□□□□ -2
LINC00348-201ENST00000428761 CCL18P55774 89 aa2.57□□□□□ -2
LINC00348-201ENST00000428761 LINC00208Q96KT6 92 aa2.57□□□□□ -2
LINC00348-201ENST00000428761 LINC00846Q9NV44 126 aa2.57□□□□□ -2
LINC00348-201ENST00000428761 LRP1Q07954 4544 aaKnown RBP2.56□□□□□ -2
LINC00348-201ENST00000428761 LOC110117498A0A087WWA1 95 aa2.56□□□□□ -2
LINC00348-201ENST00000428761 TRAV21A0A0B4J279 112 aa2.56□□□□□ -2
LINC00348-201ENST00000428761 J3QRE1 110 aa2.56□□□□□ -2
LINC00348-201ENST00000428761 MGPP08493 103 aa2.56□□□□□ -2
LINC00348-201ENST00000428761 DEFB110Q30KQ9 67 aa2.56□□□□□ -2
LINC00348-201ENST00000428761 TRGV2A0A075B6R0 118 aa2.55□□□□□ -2
LINC00348-201ENST00000428761 H0Y9P7 68 aa2.55□□□□□ -2
LINC00348-201ENST00000428761 UQCR11O14957 56 aa2.55□□□□□ -2
LINC00348-201ENST00000428761 FXYD6P3P58550 94 aa2.55□□□□□ -2
LINC00348-201ENST00000428761 FXYD4P59646 89 aa2.55□□□□□ -2
LINC00348-201ENST00000428761 KRTAP20-1Q3LI63 56 aa2.55□□□□□ -2
LINC00348-201ENST00000428761 ARFGEF3Q5TH69 2177 aa2.55□□□□□ -2
LINC00348-201ENST00000428761 IGKV3OR2-268A0A0C4DH90 116 aa2.54□□□□□ -2
LINC00348-201ENST00000428761 RPL37AP61513 92 aaKnown RBP2.54□□□□□ -2
LINC00348-201ENST00000428761 ZNF625Q96I27 306 aaPredicted RBP2.54□□□□□ -2
LINC00348-201ENST00000428761 FAT3Q8TDW7 4589 aa2.54□□□□□ -2
LINC00348-201ENST00000428761 M0R1W7 72 aa2.53□□□□□ -2
LINC00348-201ENST00000428761 SPINK7P58062 85 aa2.53□□□□□ -2
LINC00348-201ENST00000428761 C10orf113Q5VZT2 155 aa2.53□□□□□ -2
LINC00348-201ENST00000428761 COX14Q96I36 57 aa2.53□□□□□ -2
LINC00348-201ENST00000428761 PLAC8Q9NZF1 115 aa2.53□□□□□ -2
LINC00348-201ENST00000428761 MACF1Q9UPN3 7388 aaKnown RBP2.52□□□□□ -2.01
LINC00348-201ENST00000428761 NBDYA0A0U1RRE5 68 aa2.52□□□□□ -2.01
LINC00348-201ENST00000428761 GAFA1Q96PS6 74 aa2.52□□□□□ -2.01
LINC00348-201ENST00000428761 TRBV6-1A0A0K0K1D8 114 aa2.51□□□□□ -2.01
LINC00348-201ENST00000428761 ARL14EPLP0DKL9 152 aa2.51□□□□□ -2.01
LINC00348-201ENST00000428761 IGKV2-40A0A087WW87 121 aaPredicted RBP2.5□□□□□ -2.01
LINC00348-201ENST00000428761 IGKV2-29A2NJV5 120 aaPredicted RBP2.5□□□□□ -2.01
LINC00348-201ENST00000428761 IGKV2D-40P01614 121 aaPredicted RBP2.5□□□□□ -2.01
LINC00348-201ENST00000428761 ZNF137PP52743 207 aa2.5□□□□□ -2.01
LINC00348-201ENST00000428761 FXYD3Q14802 87 aa2.5□□□□□ -2.01
LINC00348-201ENST00000428761 DEFB112Q30KQ8 113 aa2.5□□□□□ -2.01
LINC00348-201ENST00000428761 OBSCN-AS1Q96MR7 158 aa2.5□□□□□ -2.01
LINC00348-201ENST00000428761 I3L3M4 83 aa2.49□□□□□ -2.01
LINC00348-201ENST00000428761 C5orf56Q8N8D9 126 aa2.49□□□□□ -2.01
LINC00348-201ENST00000428761 DEFB104AQ8WTQ1 72 aa2.49□□□□□ -2.01
LINC00348-201ENST00000428761 USH2AO75445 5202 aa2.48□□□□□ -2.01
LINC00348-201ENST00000428761 TNXBP22105 4242 aa2.48□□□□□ -2.01
LINC00348-201ENST00000428761 KRTAP13-4Q3LI77 160 aa2.48□□□□□ -2.01
LINC00348-201ENST00000428761 ZCCHC13Q8WW36 166 aaKnown RBP2.48□□□□□ -2.01
LINC00348-201ENST00000428761 SPRR4Q96PI1 79 aa2.48□□□□□ -2.01
LINC00348-201ENST00000428761 COX17Q14061 63 aa2.47□□□□□ -2.01
LINC00348-201ENST00000428761 SPATA8Q6RVD6 105 aa2.47□□□□□ -2.01
LINC00348-201ENST00000428761 DEFB108BQ8NET1 73 aa2.47□□□□□ -2.01
LINC00348-201ENST00000428761 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.46□□□□□ -2.02
LINC00348-201ENST00000428761 A0A087WTM6 91 aa2.46□□□□□ -2.02
LINC00348-201ENST00000428761 LINC01546A6NGU7 62 aa2.46□□□□□ -2.02
LINC00348-201ENST00000428761 IGIPA6NJ69 53 aa2.46□□□□□ -2.02
LINC00348-201ENST00000428761 NDUFA4O00483 81 aa2.46□□□□□ -2.02
LINC00348-201ENST00000428761 NDUFA3O95167 84 aa2.46□□□□□ -2.02
LINC00348-201ENST00000428761 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
LINC00348-201ENST00000428761 UNQ6190/PRO20217Q6UXQ8 127 aa2.45□□□□□ -2.02
LINC00348-201ENST00000428761 TRGV1A0A0A0MS02 117 aa2.44□□□□□ -2.02
LINC00348-201ENST00000428761 HAMPP81172 84 aa2.44□□□□□ -2.02
LINC00348-201ENST00000428761 TMEM167BQ9NRX6 74 aa2.43□□□□□ -2.02
LINC00348-201ENST00000428761 FCGBPQ9Y6R7 5405 aaPredicted RBP2.43□□□□□ -2.02
LINC00348-201ENST00000428761 A0A1B0GU69 56 aa2.42□□□□□ -2.02
LINC00348-201ENST00000428761 LYNX1G3V0Z9 82 aa2.42□□□□□ -2.02
LINC00348-201ENST00000428761 LYNX1P0DP58 116 aa2.42□□□□□ -2.02
LINC00348-201ENST00000428761 ACYP2P14621 99 aa2.42□□□□□ -2.02
LINC00348-201ENST00000428761 KRTAP6-3Q3LI67 103 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms