RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 BAALC-AS2P0C853 105 aa4.96□□□□□ -1.62
SMC1A-203ENST00000428014 A0A1B0GV90 55 aa4.95□□□□□ -1.62
SMC1A-203ENST00000428014 A0A1B0GW54 56 aa4.95□□□□□ -1.62
SMC1A-203ENST00000428014 KRTAP4-11Q9BYQ6 195 aa4.95□□□□□ -1.62
SMC1A-203ENST00000428014 F8W1H4 67 aa4.94□□□□□ -1.62
SMC1A-203ENST00000428014 RPL37P61927 97 aaKnown RBP4.94□□□□□ -1.62
SMC1A-203ENST00000428014 ANKRD29Q8N6D5 301 aa4.94□□□□□ -1.62
SMC1A-203ENST00000428014 SVIPQ8NHG7 77 aa4.94□□□□□ -1.62
SMC1A-203ENST00000428014 A0A0G2JQZ4 141 aa4.93□□□□□ -1.62
SMC1A-203ENST00000428014 Q75L30 129 aa4.93□□□□□ -1.62
SMC1A-203ENST00000428014 PRO0461Q9UI25 63 aa4.93□□□□□ -1.62
SMC1A-203ENST00000428014 JMJD7-PLA2G4BH0Y9G9 81 aa4.92□□□□□ -1.62
SMC1A-203ENST00000428014 KRTAP15-1Q3LI76 137 aa4.91□□□□□ -1.62
SMC1A-203ENST00000428014 MTURNQ8N3F0 131 aa4.91□□□□□ -1.62
SMC1A-203ENST00000428014 FAT4Q6V0I7 4981 aa4.9□□□□□ -1.63
SMC1A-203ENST00000428014 A0A087WSZ3 146 aa4.9□□□□□ -1.63
SMC1A-203ENST00000428014 A0A1W2PNM2 257 aa4.9□□□□□ -1.63
SMC1A-203ENST00000428014 PDE6GP18545 87 aa4.9□□□□□ -1.63
SMC1A-203ENST00000428014 RBM3P98179 157 aaKnown RBP4.9□□□□□ -1.63
SMC1A-203ENST00000428014 C9orf92A6NGG3 77 aa4.89□□□□□ -1.63
SMC1A-203ENST00000428014 OBSCN-AS1Q96MR7 158 aa4.89□□□□□ -1.63
SMC1A-203ENST00000428014 Q96NJ1 140 aa4.89□□□□□ -1.63
SMC1A-203ENST00000428014 C20orf166-AS1Q96NR2 134 aa4.89□□□□□ -1.63
SMC1A-203ENST00000428014 KRTAP4-2Q9BYR5 136 aa4.89□□□□□ -1.63
SMC1A-203ENST00000428014 PCOTHQ58A44 107 aa4.88□□□□□ -1.63
SMC1A-203ENST00000428014 DSCR8Q96T75 97 aa4.88□□□□□ -1.63
SMC1A-203ENST00000428014 KRTAP4-1Q9BYQ7 146 aa4.88□□□□□ -1.63
SMC1A-203ENST00000428014 LOC110117498A0A087WWA1 95 aa4.86□□□□□ -1.63
SMC1A-203ENST00000428014 A8MUU9 505 aa4.86□□□□□ -1.63
SMC1A-203ENST00000428014 CCKP06307 115 aa4.86□□□□□ -1.63
SMC1A-203ENST00000428014 LINC00472Q9H8W2 130 aa4.86□□□□□ -1.63
SMC1A-203ENST00000428014 J3KT08 172 aa4.85□□□□□ -1.63
SMC1A-203ENST00000428014 KRTAP19-2Q3LHN2 52 aa4.85□□□□□ -1.63
SMC1A-203ENST00000428014 ETDBQ3ZM63 59 aa4.85□□□□□ -1.63
SMC1A-203ENST00000428014 ATP11AUNQ6ZP68 121 aa4.85□□□□□ -1.63
SMC1A-203ENST00000428014 A0A1B0GV72 72 aa4.84□□□□□ -1.63
SMC1A-203ENST00000428014 Q6ZQT0 140 aa4.84□□□□□ -1.63
SMC1A-203ENST00000428014 C14orf132Q9NPU4 83 aa4.84□□□□□ -1.63
SMC1A-203ENST00000428014 C8orf87E5RJ46 101 aa4.82□□□□□ -1.64
SMC1A-203ENST00000428014 LINC00313P59037 77 aa4.81□□□□□ -1.64
SMC1A-203ENST00000428014 IGKV4-1P06312 121 aa4.8□□□□□ -1.64
SMC1A-203ENST00000428014 VPS25Q9BRG1 176 aa4.8□□□□□ -1.64
SMC1A-203ENST00000428014 SIGMAR1Q99720 223 aa4.79□□□□□ -1.64
SMC1A-203ENST00000428014 KRTAP16-1A8MUX0 517 aa4.78□□□□□ -1.64
SMC1A-203ENST00000428014 J3QR89 54 aa4.78□□□□□ -1.64
SMC1A-203ENST00000428014 FAM240AA0A1B0GVK7 77 aa4.76□□□□□ -1.65
SMC1A-203ENST00000428014 A0A1B0GVX0 72 aa4.76□□□□□ -1.65
SMC1A-203ENST00000428014 NDUFB1O75438 58 aa4.76□□□□□ -1.65
SMC1A-203ENST00000428014 ACYP1P07311 99 aa4.76□□□□□ -1.65
SMC1A-203ENST00000428014 MT1HP80294 61 aa4.75□□□□□ -1.65
SMC1A-203ENST00000428014 A8MWP4 228 aa4.73□□□□□ -1.65
SMC1A-203ENST00000428014 DSCR10P59022 87 aa4.73□□□□□ -1.65
SMC1A-203ENST00000428014 NREPQ16612 68 aa4.73□□□□□ -1.65
SMC1A-203ENST00000428014 Q8N9P0 234 aaPredicted RBP4.73□□□□□ -1.65
SMC1A-203ENST00000428014 UBL5Q9BZL1 73 aa4.73□□□□□ -1.65
SMC1A-203ENST00000428014 FLGP20930 4061 aaPredicted RBP4.72□□□□□ -1.65
SMC1A-203ENST00000428014 K7ERU9 68 aa4.72□□□□□ -1.65
SMC1A-203ENST00000428014 IGHV6-1A0A0B4J1U7 121 aa4.71□□□□□ -1.66
SMC1A-203ENST00000428014 COX6B2Q6YFQ2 88 aa4.71□□□□□ -1.66
SMC1A-203ENST00000428014 LINC00846Q9NV44 126 aa4.71□□□□□ -1.66
SMC1A-203ENST00000428014 Q6ZVQ6 151 aa4.7□□□□□ -1.66
SMC1A-203ENST00000428014 MPLKIPQ8TAP9 179 aa4.7□□□□□ -1.66
SMC1A-203ENST00000428014 NOTCH2NLQ7Z3S9 236 aa4.69□□□□□ -1.66
SMC1A-203ENST00000428014 PRR15Q8IV56 129 aa4.69□□□□□ -1.66
SMC1A-203ENST00000428014 DEFB116Q30KQ4 102 aa4.67□□□□□ -1.66
SMC1A-203ENST00000428014 ZCCHC13Q8WW36 166 aaKnown RBP4.67□□□□□ -1.66
SMC1A-203ENST00000428014 C8orf17Q9NRJ1 99 aa4.67□□□□□ -1.66
SMC1A-203ENST00000428014 IGKV3D-7A0A0C4DH55 119 aa4.66□□□□□ -1.66
SMC1A-203ENST00000428014 BPY2O14599 106 aa4.66□□□□□ -1.66
SMC1A-203ENST00000428014 KRTAP10-6P60371 365 aaPredicted RBP4.66□□□□□ -1.66
SMC1A-203ENST00000428014 ATP5EP2Q5VTU8 51 aa4.66□□□□□ -1.66
SMC1A-203ENST00000428014 CXCL6P80162 114 aa4.65□□□□□ -1.67
SMC1A-203ENST00000428014 LINC00643Q86TS7 51 aa4.65□□□□□ -1.67
SMC1A-203ENST00000428014 TMEM254Q8TBM7 123 aa4.65□□□□□ -1.67
SMC1A-203ENST00000428014 RBM12B-AS1Q9P1G2 102 aa4.65□□□□□ -1.67
SMC1A-203ENST00000428014 HRES1P13985 223 aa4.63□□□□□ -1.67
SMC1A-203ENST00000428014 M0R2T5 61 aa4.62□□□□□ -1.67
SMC1A-203ENST00000428014 MRPL34Q9BQ48 92 aaKnown RBP4.62□□□□□ -1.67
SMC1A-203ENST00000428014 MMP24-AS1A0A0U1RRL7 71 aa4.61□□□□□ -1.67
SMC1A-203ENST00000428014 hDV103S1A0JD37 113 aa4.6□□□□□ -1.67
SMC1A-203ENST00000428014 WFDC13Q8IUB5 93 aa4.6□□□□□ -1.67
SMC1A-203ENST00000428014 K7EQZ3 153 aa4.59□□□□□ -1.67
SMC1A-203ENST00000428014 SPINK7P58062 85 aa4.59□□□□□ -1.67
SMC1A-203ENST00000428014 PCP4P48539 62 aa4.57□□□□□ -1.68
SMC1A-203ENST00000428014 Q8N9L7 120 aa4.56□□□□□ -1.68
SMC1A-203ENST00000428014 IMUPQ9GZP8 106 aa4.56□□□□□ -1.68
SMC1A-203ENST00000428014 HCG22E2RYF7 251 aa4.55□□□□□ -1.68
SMC1A-203ENST00000428014 FAM236DA0A1B0GTK5 79 aa4.54□□□□□ -1.68
SMC1A-203ENST00000428014 FAM236CP0DP71 79 aa4.54□□□□□ -1.68
SMC1A-203ENST00000428014 HIST1H4AP62805 103 aaKnown RBP4.54□□□□□ -1.68
SMC1A-203ENST00000428014 MT-ATP8P03928 68 aa4.53□□□□□ -1.68
SMC1A-203ENST00000428014 CASC2Q6XLA1 102 aa4.53□□□□□ -1.68
SMC1A-203ENST00000428014 KRTAP9-8Q9BYQ0 159 aa4.53□□□□□ -1.68
SMC1A-203ENST00000428014 TP53AIP1Q9HCN2 124 aa4.51□□□□□ -1.69
SMC1A-203ENST00000428014 A0A087WVE0 104 aa4.5□□□□□ -1.69
SMC1A-203ENST00000428014 C7orf65Q6ZTY9 151 aa4.5□□□□□ -1.69
SMC1A-203ENST00000428014 CRCT1Q9UGL9 99 aa4.49□□□□□ -1.69
SMC1A-203ENST00000428014 NDUFS5O43920 106 aa4.47□□□□□ -1.69
SMC1A-203ENST00000428014 H1FX-AS1Q4G0G2 97 aa4.45□□□□□ -1.7
SMC1A-203ENST00000428014 Q5W150 140 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms