RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 IGKV2-30P06310 120 aa9.81□□□□□ -0.84
PKP4-205ENST00000426248 PLA2G2DQ9UNK4 145 aa9.8□□□□□ -0.84
PKP4-205ENST00000426248 Q6ZRN7 208 aaPredicted RBP9.8□□□□□ -0.84
PKP4-205ENST00000426248 PANO1I0J062 215 aa9.79□□□□□ -0.84
PKP4-205ENST00000426248 HUWE1Q7Z6Z7 4374 aaKnown RBP9.77□□□□□ -0.84
PKP4-205ENST00000426248 TP53AIP1Q9HCN2 124 aa9.77□□□□□ -0.85
PKP4-205ENST00000426248 KRTAP10-2P60368 255 aa9.75□□□□□ -0.85
PKP4-205ENST00000426248 CSAG1Q6PB30 78 aa9.75□□□□□ -0.85
PKP4-205ENST00000426248 ZNF706Q9Y5V0 76 aaPredicted RBP9.74□□□□□ -0.85
PKP4-205ENST00000426248 MMP24-AS1A0A0U1RRL7 71 aa9.74□□□□□ -0.85
PKP4-205ENST00000426248 KRTAP4-16G5E9R7 235 aaPredicted RBP9.74□□□□□ -0.85
PKP4-205ENST00000426248 IGLV5-37A0A075B6J1 123 aa9.73□□□□□ -0.85
PKP4-205ENST00000426248 SPRR1AP35321 89 aa9.73□□□□□ -0.85
PKP4-205ENST00000426248 PSORS1C2Q9UIG4 136 aa9.72□□□□□ -0.85
PKP4-205ENST00000426248 ANK2Q01484 3957 aa9.71□□□□□ -0.85
PKP4-205ENST00000426248 SMR3BP02814 79 aaPredicted RBP9.71□□□□□ -0.85
PKP4-205ENST00000426248 ACYP2P14621 99 aa9.71□□□□□ -0.86
PKP4-205ENST00000426248 MIR22HGQ0VDD5 57 aa9.7□□□□□ -0.86
PKP4-205ENST00000426248 C8orf17Q9NRJ1 99 aa9.69□□□□□ -0.86
PKP4-205ENST00000426248 KRTAP7-1Q8IUC3 87 aa9.68□□□□□ -0.86
PKP4-205ENST00000426248 LINC00472Q9H8W2 130 aa9.67□□□□□ -0.86
PKP4-205ENST00000426248 UQCR11O14957 56 aa9.64□□□□□ -0.87
PKP4-205ENST00000426248 DNAH9Q9NYC9 4486 aa9.64□□□□□ -0.87
PKP4-205ENST00000426248 PLA2G1BP04054 148 aaKnown RBP9.63□□□□□ -0.87
PKP4-205ENST00000426248 MRPL34Q9BQ48 92 aaKnown RBP9.63□□□□□ -0.87
PKP4-205ENST00000426248 KRTAP10-1P60331 282 aa9.63□□□□□ -0.87
PKP4-205ENST00000426248 KRTAP11-1Q8IUC1 163 aa9.62□□□□□ -0.87
PKP4-205ENST00000426248 ZNF861PO60384 105 aa9.6□□□□□ -0.87
PKP4-205ENST00000426248 PLAC8Q9NZF1 115 aa9.58□□□□□ -0.88
PKP4-205ENST00000426248 PRKDCP78527 4128 aaKnown RBP9.57□□□□□ -0.88
PKP4-205ENST00000426248 IGLV7-43P04211 117 aa9.56□□□□□ -0.88
PKP4-205ENST00000426248 CSMD3Q7Z407 3707 aa9.56□□□□□ -0.88
PKP4-205ENST00000426248 A0A1B0GVX0 72 aa9.55□□□□□ -0.88
PKP4-205ENST00000426248 CMYA5Q8N3K9 4069 aa9.54□□□□□ -0.88
PKP4-205ENST00000426248 A0A087X002 238 aa9.47□□□□□ -0.89
PKP4-205ENST00000426248 NOTCH2NLQ7Z3S9 236 aa9.47□□□□□ -0.89
PKP4-205ENST00000426248 C9orf92A6NGG3 77 aa9.46□□□□□ -0.89
PKP4-205ENST00000426248 FAM229AH3BQW9 127 aa9.45□□□□□ -0.9
PKP4-205ENST00000426248 SPATA8Q6RVD6 105 aa9.43□□□□□ -0.9
PKP4-205ENST00000426248 Q96NJ1 140 aa9.43□□□□□ -0.9
PKP4-205ENST00000426248 CRIPTQ9P021 101 aa9.42□□□□□ -0.9
PKP4-205ENST00000426248 Q5W150 140 aa9.42□□□□□ -0.9
PKP4-205ENST00000426248 PLECQ15149 4684 aaKnown RBP9.42□□□□□ -0.9
PKP4-205ENST00000426248 DNAH3Q8TD57 4116 aa9.41□□□□□ -0.9
PKP4-205ENST00000426248 TYMSOSQ8TAI1 123 aa9.41□□□□□ -0.9
PKP4-205ENST00000426248 ASB16-AS1Q495Z4 193 aa9.35□□□□□ -0.91
PKP4-205ENST00000426248 STARD9Q9P2P6 4700 aa9.34□□□□□ -0.91
PKP4-205ENST00000426248 Q8N1X5 172 aa9.34□□□□□ -0.91
PKP4-205ENST00000426248 SSBP3-AS1Q7Z2R9 100 aa9.33□□□□□ -0.92
PKP4-205ENST00000426248 SPRR1BP22528 89 aa9.33□□□□□ -0.92
PKP4-205ENST00000426248 DMAC1Q96GE9 116 aa9.29□□□□□ -0.92
PKP4-205ENST00000426248 DNAH10Q8IVF4 4471 aa9.28□□□□□ -0.92
PKP4-205ENST00000426248 KRTAP13-1Q8IUC0 172 aa9.27□□□□□ -0.93
PKP4-205ENST00000426248 SPINT4Q6UDR6 99 aa9.26□□□□□ -0.93
PKP4-205ENST00000426248 LYSTQ99698 3801 aa9.26□□□□□ -0.93
PKP4-205ENST00000426248 ROMO1P60602 79 aa9.25□□□□□ -0.93
PKP4-205ENST00000426248 K7ERS5 55 aa9.25□□□□□ -0.93
PKP4-205ENST00000426248 Q6ZSA8 131 aa9.24□□□□□ -0.93
PKP4-205ENST00000426248 LINC00304Q8N9R0 145 aa9.21□□□□□ -0.94
PKP4-205ENST00000426248 KRTAP25-1Q3LHN0 102 aa9.19□□□□□ -0.94
PKP4-205ENST00000426248 LINC00483Q53H64 154 aa9.18□□□□□ -0.94
PKP4-205ENST00000426248 Q5VSD8 79 aa9.17□□□□□ -0.94
PKP4-205ENST00000426248 KMT2AQ03164 3969 aa9.13□□□□□ -0.95
PKP4-205ENST00000426248 DNAH1Q9P2D7 4330 aa9.12□□□□□ -0.95
PKP4-205ENST00000426248 VPS13DQ5THJ4 4388 aa9.12□□□□□ -0.95
PKP4-205ENST00000426248 A0A0D9SG42 100 aa9.12□□□□□ -0.95
PKP4-205ENST00000426248 DNAH7Q8WXX0 4024 aa9.09□□□□□ -0.95
PKP4-205ENST00000426248 A0A1B0GVY2 172 aa9.08□□□□□ -0.96
PKP4-205ENST00000426248 KRTAP13-2Q52LG2 175 aa9.07□□□□□ -0.96
PKP4-205ENST00000426248 A8MUU9 505 aa9.07□□□□□ -0.96
PKP4-205ENST00000426248 A0A1B0GU33 70 aa9.03□□□□□ -0.96
PKP4-205ENST00000426248 DNAH11Q96DT5 4516 aa8.98□□□□□ -0.97
PKP4-205ENST00000426248 J3QL48 77 aa8.98□□□□□ -0.97
PKP4-205ENST00000426248 KRTAP1-4P0C5Y4 121 aa8.98□□□□□ -0.97
PKP4-205ENST00000426248 KRTAP13-3Q3SY46 172 aa8.95□□□□□ -0.98
PKP4-205ENST00000426248 NDUFAF8A1L188 74 aa8.95□□□□□ -0.98
PKP4-205ENST00000426248 H0YAA0 97 aa8.92□□□□□ -0.98
PKP4-205ENST00000426248 DYNC2H1Q8NCM8 4307 aaKnown RBP8.88□□□□□ -0.99
PKP4-205ENST00000426248 P0C880 135 aa8.88□□□□□ -0.99
PKP4-205ENST00000426248 HYDINQ4G0P3 5121 aa8.87□□□□□ -0.99
PKP4-205ENST00000426248 ALMS1Q8TCU4 4167 aa8.86□□□□□ -0.99
PKP4-205ENST00000426248 DNAH2Q9P225 4427 aa8.86□□□□□ -0.99
PKP4-205ENST00000426248 DNAH17Q9UFH2 4485 aa8.83□□□□□ -1
PKP4-205ENST00000426248 DNAH5Q8TE73 4624 aa8.82□□□□□ -1
PKP4-205ENST00000426248 H1FX-AS1Q4G0G2 97 aa8.82□□□□□ -1
PKP4-205ENST00000426248 A0A0A0MQY5 61 aa8.78□□□□□ -1
PKP4-205ENST00000426248 SACSQ9NZJ4 4579 aa8.77□□□□□ -1.01
PKP4-205ENST00000426248 KMT2CQ8NEZ4 4911 aaKnown RBP8.76□□□□□ -1.01
PKP4-205ENST00000426248 KRTAP16-1A8MUX0 517 aa8.75□□□□□ -1.01
PKP4-205ENST00000426248 COX6B2Q6YFQ2 88 aa8.74□□□□□ -1.01
PKP4-205ENST00000426248 DNAH6Q9C0G6 4158 aa8.73□□□□□ -1.01
PKP4-205ENST00000426248 LRP1BQ9NZR2 4599 aa8.73□□□□□ -1.01
PKP4-205ENST00000426248 FAT1Q14517 4588 aa8.73□□□□□ -1.01
PKP4-205ENST00000426248 DYNC1H1Q14204 4646 aaKnown RBP8.72□□□□□ -1.01
PKP4-205ENST00000426248 C20orf166-AS1Q96NR2 134 aa8.71□□□□□ -1.02
PKP4-205ENST00000426248 C10orf95Q9H7T3 257 aa8.71□□□□□ -1.02
PKP4-205ENST00000426248 PKHD1P08F94 4074 aa8.64□□□□□ -1.03
PKP4-205ENST00000426248 RPS29P62273 56 aaKnown RBP8.63□□□□□ -1.03
PKP4-205ENST00000426248 HECTD4Q9Y4D8 3996 aa8.63□□□□□ -1.03
PKP4-205ENST00000426248 RYR2Q92736 4967 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms