RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 LINC00304Q8N9R0 145 aa8.72□□□□□ -1.01
ACTB-204ENST00000425660 A0A1B0GVX0 72 aa8.71□□□□□ -1.01
ACTB-204ENST00000425660 CCDC179H3BU77 68 aa8.71□□□□□ -1.01
ACTB-204ENST00000425660 OCR1Q9BZK8 76 aa8.71□□□□□ -1.01
ACTB-204ENST00000425660 C1orf195Q5TG92 126 aa8.7□□□□□ -1.02
ACTB-204ENST00000425660 MMP24-AS1A0A0U1RRL7 71 aa8.7□□□□□ -1.02
ACTB-204ENST00000425660 KRTAP4-5Q9BYR2 181 aa8.69□□□□□ -1.02
ACTB-204ENST00000425660 CASC2Q6XLA1 102 aa8.68□□□□□ -1.02
ACTB-204ENST00000425660 WFDC13Q8IUB5 93 aa8.68□□□□□ -1.02
ACTB-204ENST00000425660 Q8N1X5 172 aa8.68□□□□□ -1.02
ACTB-204ENST00000425660 C8orf17Q9NRJ1 99 aa8.66□□□□□ -1.02
ACTB-204ENST00000425660 IGHV6-1A0A0B4J1U7 121 aa8.66□□□□□ -1.02
ACTB-204ENST00000425660 HERC2O95714 4834 aa8.65□□□□□ -1.02
ACTB-204ENST00000425660 LRP1Q07954 4544 aaKnown RBP8.65□□□□□ -1.03
ACTB-204ENST00000425660 hDV103S1A0JD37 113 aa8.64□□□□□ -1.03
ACTB-204ENST00000425660 NOTCH2NLQ7Z3S9 236 aa8.61□□□□□ -1.03
ACTB-204ENST00000425660 TNXBP22105 4242 aa8.61□□□□□ -1.03
ACTB-204ENST00000425660 KRTAP10-8P60410 259 aa8.61□□□□□ -1.03
ACTB-204ENST00000425660 C8orf87E5RJ46 101 aa8.59□□□□□ -1.03
ACTB-204ENST00000425660 FAT3Q8TDW7 4589 aa8.58□□□□□ -1.04
ACTB-204ENST00000425660 ABCA13Q86UQ4 5058 aa8.58□□□□□ -1.04
ACTB-204ENST00000425660 TMEM254Q8TBM7 123 aa8.58□□□□□ -1.04
ACTB-204ENST00000425660 FLG2Q5D862 2391 aaPredicted RBP8.57□□□□□ -1.04
ACTB-204ENST00000425660 KLKP1Q107X0 134 aa8.57□□□□□ -1.04
ACTB-204ENST00000425660 C20orf197Q8N268 126 aa8.57□□□□□ -1.04
ACTB-204ENST00000425660 MRPL34Q9BQ48 92 aaKnown RBP8.57□□□□□ -1.04
ACTB-204ENST00000425660 MYCBP2O75592 4640 aa8.56□□□□□ -1.04
ACTB-204ENST00000425660 LINC00313P59037 77 aa8.54□□□□□ -1.04
ACTB-204ENST00000425660 C5orf47Q569G3 176 aa8.54□□□□□ -1.04
ACTB-204ENST00000425660 CYSTM1Q9H1C7 97 aa8.54□□□□□ -1.04
ACTB-204ENST00000425660 TP53AIP1Q9HCN2 124 aa8.52□□□□□ -1.04
ACTB-204ENST00000425660 A0A0U1RQV1 116 aa8.51□□□□□ -1.05
ACTB-204ENST00000425660 KRTAP16-1A8MUX0 517 aa8.49□□□□□ -1.05
ACTB-204ENST00000425660 SNURFQ9Y675 71 aa8.49□□□□□ -1.05
ACTB-204ENST00000425660 MT1HL1P0DM35 61 aa8.48□□□□□ -1.05
ACTB-204ENST00000425660 Q8N9P0 234 aaPredicted RBP8.48□□□□□ -1.05
ACTB-204ENST00000425660 PCLOQ9Y6V0 5065 aa8.47□□□□□ -1.05
ACTB-204ENST00000425660 TRAV22A0A0B4J277 110 aa8.46□□□□□ -1.06
ACTB-204ENST00000425660 ZCCHC13Q8WW36 166 aaKnown RBP8.46□□□□□ -1.06
ACTB-204ENST00000425660 H7BZZ5 65 aa8.45□□□□□ -1.06
ACTB-204ENST00000425660 NDUFS5O43920 106 aa8.45□□□□□ -1.06
ACTB-204ENST00000425660 MP68P56378 58 aa8.45□□□□□ -1.06
ACTB-204ENST00000425660 NDUFC1O43677 76 aa8.45□□□□□ -1.06
ACTB-204ENST00000425660 H3BPC8 53 aa8.44□□□□□ -1.06
ACTB-204ENST00000425660 H0Y9P7 68 aa8.43□□□□□ -1.06
ACTB-204ENST00000425660 OXTP01178 125 aa8.43□□□□□ -1.06
ACTB-204ENST00000425660 RETNLBQ9BQ08 111 aa8.42□□□□□ -1.06
ACTB-204ENST00000425660 TMEM258P61165 79 aa8.41□□□□□ -1.06
ACTB-204ENST00000425660 KRTAP13-3Q3SY46 172 aa8.39□□□□□ -1.07
ACTB-204ENST00000425660 LINC00208Q96KT6 92 aa8.39□□□□□ -1.07
ACTB-204ENST00000425660 DMBT1Q9UGM3 2413 aaPredicted RBP8.38□□□□□ -1.07
ACTB-204ENST00000425660 Q5W150 140 aa8.37□□□□□ -1.07
ACTB-204ENST00000425660 FP248Q71RG6 208 aaPredicted RBP8.37□□□□□ -1.07
ACTB-204ENST00000425660 C1orf64Q8NEQ6 169 aa8.36□□□□□ -1.07
ACTB-204ENST00000425660 C9orf92A6NGG3 77 aa8.31□□□□□ -1.08
ACTB-204ENST00000425660 C20orf166-AS1Q96NR2 134 aa8.31□□□□□ -1.08
ACTB-204ENST00000425660 A8MUU9 505 aa8.29□□□□□ -1.08
ACTB-204ENST00000425660 FAM236DA0A1B0GTK5 79 aa8.29□□□□□ -1.08
ACTB-204ENST00000425660 LOC101927531A0A1B0GV80 90 aa8.29□□□□□ -1.08
ACTB-204ENST00000425660 FAM236CP0DP71 79 aa8.29□□□□□ -1.08
ACTB-204ENST00000425660 ATP5EP56381 51 aaPredicted RBP8.26□□□□□ -1.09
ACTB-204ENST00000425660 IGLV7-46A0A075B6I9 117 aa8.25□□□□□ -1.09
ACTB-204ENST00000425660 J3QL48 77 aa8.23□□□□□ -1.09
ACTB-204ENST00000425660 Q75L30 129 aa8.23□□□□□ -1.09
ACTB-204ENST00000425660 SPANXA2-OT1Q8N9U9 137 aa8.23□□□□□ -1.09
ACTB-204ENST00000425660 CYP4F30PQ9H0H9 118 aa8.23□□□□□ -1.09
ACTB-204ENST00000425660 IGKV2-30P06310 120 aa8.22□□□□□ -1.09
ACTB-204ENST00000425660 PCOTHQ58A44 107 aa8.19□□□□□ -1.1
ACTB-204ENST00000425660 RPS28P62857 69 aaKnown RBP8.18□□□□□ -1.1
ACTB-204ENST00000425660 HERC1Q15751 4861 aa8.16□□□□□ -1.1
ACTB-204ENST00000425660 PRR4Q16378 134 aa8.16□□□□□ -1.1
ACTB-204ENST00000425660 XP32Q5T750 250 aa8.15□□□□□ -1.1
ACTB-204ENST00000425660 TPRXLQ17RH7 258 aa8.15□□□□□ -1.11
ACTB-204ENST00000425660 SERP1Q9Y6X1 66 aa8.13□□□□□ -1.11
ACTB-204ENST00000425660 IGKV2D-30A0A075B6S6 120 aa8.12□□□□□ -1.11
ACTB-204ENST00000425660 RPL37P61927 97 aaKnown RBP8.12□□□□□ -1.11
ACTB-204ENST00000425660 C7orf65Q6ZTY9 151 aa8.11□□□□□ -1.11
ACTB-204ENST00000425660 HRES1P13985 223 aa8.08□□□□□ -1.12
ACTB-204ENST00000425660 ATP11AUNQ6ZP68 121 aa8.07□□□□□ -1.12
ACTB-204ENST00000425660 LRP2P98164 4655 aa8.02□□□□□ -1.13
ACTB-204ENST00000425660 SPINK7P58062 85 aa8.02□□□□□ -1.13
ACTB-204ENST00000425660 LPAP08519 4548 aa8.02□□□□□ -1.13
ACTB-204ENST00000425660 DMAC1Q96GE9 116 aa8.01□□□□□ -1.13
ACTB-204ENST00000425660 COA5Q86WW8 74 aa7.95□□□□□ -1.14
ACTB-204ENST00000425660 ACYP2P14621 99 aa7.94□□□□□ -1.14
ACTB-204ENST00000425660 SMIM26A0A096LP01 95 aa7.93□□□□□ -1.14
ACTB-204ENST00000425660 HMCN2Q8NDA2 5059 aa7.92□□□□□ -1.14
ACTB-204ENST00000425660 C4orf26Q17RF5 130 aa7.92□□□□□ -1.14
ACTB-204ENST00000425660 A8MUN3 132 aa7.9□□□□□ -1.14
ACTB-204ENST00000425660 KRTAP3-1Q9BYR8 98 aa7.85□□□□□ -1.15
ACTB-204ENST00000425660 COX6B2Q6YFQ2 88 aa7.83□□□□□ -1.16
ACTB-204ENST00000425660 SEC61BP60468 96 aaKnown RBP7.82□□□□□ -1.16
ACTB-204ENST00000425660 Q1T7F1 81 aa7.79□□□□□ -1.16
ACTB-204ENST00000425660 CHKB-CPT1BH3BT56 60 aa7.78□□□□□ -1.16
ACTB-204ENST00000425660 MPLKIPQ8TAP9 179 aa7.76□□□□□ -1.17
ACTB-204ENST00000425660 V9GYY9 64 aa7.73□□□□□ -1.17
ACTB-204ENST00000425660 MUC17Q685J3 4493 aa7.72□□□□□ -1.17
ACTB-204ENST00000425660 UBR4Q5T4S7 5183 aa7.7□□□□□ -1.18
ACTB-204ENST00000425660 LINC01558Q9Y6Z2 57 aa7.67□□□□□ -1.18
ACTB-204ENST00000425660 KRTAP4-1Q9BYQ7 146 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms