RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 TMEM254Q8TBM7 123 aa4.23□□□□□ -1.73
LSM8-204ENST00000424702 FAT2Q9NYQ8 4349 aa4.23□□□□□ -1.73
LSM8-204ENST00000424702 TP53AIP1Q9HCN2 124 aa4.23□□□□□ -1.73
LSM8-204ENST00000424702 C1orf195Q5TG92 126 aa4.22□□□□□ -1.73
LSM8-204ENST00000424702 Q5XG85 94 aa4.22□□□□□ -1.73
LSM8-204ENST00000424702 KRTAP1-4P0C5Y4 121 aa4.22□□□□□ -1.73
LSM8-204ENST00000424702 ASB16-AS1Q495Z4 193 aa4.22□□□□□ -1.73
LSM8-204ENST00000424702 ATP11AUNQ6ZP68 121 aa4.22□□□□□ -1.73
LSM8-204ENST00000424702 LINC00208Q96KT6 92 aa4.22□□□□□ -1.73
LSM8-204ENST00000424702 MRPL34Q9BQ48 92 aaKnown RBP4.22□□□□□ -1.73
LSM8-204ENST00000424702 H0Y9P7 68 aa4.21□□□□□ -1.73
LSM8-204ENST00000424702 KRTAP13-2Q52LG2 175 aa4.21□□□□□ -1.74
LSM8-204ENST00000424702 Q96NJ1 140 aa4.2□□□□□ -1.74
LSM8-204ENST00000424702 TMEM258P61165 79 aa4.2□□□□□ -1.74
LSM8-204ENST00000424702 TRAV22A0A0B4J277 110 aa4.18□□□□□ -1.74
LSM8-204ENST00000424702 FAM236DA0A1B0GTK5 79 aa4.18□□□□□ -1.74
LSM8-204ENST00000424702 FAM236CP0DP71 79 aa4.18□□□□□ -1.74
LSM8-204ENST00000424702 SEC61BP60468 96 aaKnown RBP4.18□□□□□ -1.74
LSM8-204ENST00000424702 MMP24-AS1A0A0U1RRL7 71 aa4.18□□□□□ -1.74
LSM8-204ENST00000424702 RETNLBQ9BQ08 111 aa4.18□□□□□ -1.74
LSM8-204ENST00000424702 OCR1Q9BZK8 76 aa4.18□□□□□ -1.74
LSM8-204ENST00000424702 H3BPC8 53 aa4.17□□□□□ -1.74
LSM8-204ENST00000424702 C1orf64Q8NEQ6 169 aa4.17□□□□□ -1.74
LSM8-204ENST00000424702 KRTAP10-8P60410 259 aa4.16□□□□□ -1.74
LSM8-204ENST00000424702 ATP5EP56381 51 aaPredicted RBP4.16□□□□□ -1.74
LSM8-204ENST00000424702 C9orf92A6NGG3 77 aa4.16□□□□□ -1.74
LSM8-204ENST00000424702 PRO0628Q9UI54 55 aa4.15□□□□□ -1.74
LSM8-204ENST00000424702 DNAH2Q9P225 4427 aa4.15□□□□□ -1.75
LSM8-204ENST00000424702 KLKP1Q107X0 134 aa4.15□□□□□ -1.75
LSM8-204ENST00000424702 PCOTHQ58A44 107 aa4.13□□□□□ -1.75
LSM8-204ENST00000424702 COX6B2Q6YFQ2 88 aa4.13□□□□□ -1.75
LSM8-204ENST00000424702 VPS13BQ7Z7G8 4022 aa4.13□□□□□ -1.75
LSM8-204ENST00000424702 DNAH17Q9UFH2 4485 aa4.13□□□□□ -1.75
LSM8-204ENST00000424702 LOC101927531A0A1B0GV80 90 aa4.11□□□□□ -1.75
LSM8-204ENST00000424702 PRAC1Q96KF2 57 aa4.11□□□□□ -1.75
LSM8-204ENST00000424702 KRTAP10-4P60372 401 aaPredicted RBP4.11□□□□□ -1.75
LSM8-204ENST00000424702 DNAH11Q96DT5 4516 aa4.1□□□□□ -1.75
LSM8-204ENST00000424702 SRRM2Q9UQ35 2752 aaKnown RBP4.1□□□□□ -1.75
LSM8-204ENST00000424702 IGKV2D-30A0A075B6S6 120 aa4.1□□□□□ -1.75
LSM8-204ENST00000424702 IGKV2-30P06310 120 aa4.1□□□□□ -1.75
LSM8-204ENST00000424702 H7BZZ5 65 aa4.09□□□□□ -1.75
LSM8-204ENST00000424702 NOTCH2NLQ7Z3S9 236 aa4.09□□□□□ -1.76
LSM8-204ENST00000424702 CHKB-CPT1BH3BT56 60 aa4.07□□□□□ -1.76
LSM8-204ENST00000424702 PKD1P98161 4303 aa4.07□□□□□ -1.76
LSM8-204ENST00000424702 TPRXLQ17RH7 258 aa4.07□□□□□ -1.76
LSM8-204ENST00000424702 RBM12B-AS1Q9P1G2 102 aa4.07□□□□□ -1.76
LSM8-204ENST00000424702 SERP1Q9Y6X1 66 aa4.07□□□□□ -1.76
LSM8-204ENST00000424702 DNAH8Q96JB1 4490 aa4.07□□□□□ -1.76
LSM8-204ENST00000424702 C7orf65Q6ZTY9 151 aa4.06□□□□□ -1.76
LSM8-204ENST00000424702 PMAIP1Q13794 54 aa4.05□□□□□ -1.76
LSM8-204ENST00000424702 ZCCHC13Q8WW36 166 aaKnown RBP4.05□□□□□ -1.76
LSM8-204ENST00000424702 CYSTM1Q9H1C7 97 aa4.05□□□□□ -1.76
LSM8-204ENST00000424702 PKHD1P08F94 4074 aa4.04□□□□□ -1.76
LSM8-204ENST00000424702 Q75L30 129 aa4.04□□□□□ -1.76
LSM8-204ENST00000424702 SMIM26A0A096LP01 95 aa4.04□□□□□ -1.76
LSM8-204ENST00000424702 MT1HL1P0DM35 61 aa4.03□□□□□ -1.76
LSM8-204ENST00000424702 SPTSSBQ8NFR3 76 aa4.03□□□□□ -1.76
LSM8-204ENST00000424702 RYR2Q92736 4967 aa4.02□□□□□ -1.77
LSM8-204ENST00000424702 RPL37P61927 97 aaKnown RBP4.02□□□□□ -1.77
LSM8-204ENST00000424702 Q8N9P0 234 aaPredicted RBP4.02□□□□□ -1.77
LSM8-204ENST00000424702 RPS28P62857 69 aaKnown RBP4.02□□□□□ -1.77
LSM8-204ENST00000424702 SPANXA2-OT1Q8N9U9 137 aa4.01□□□□□ -1.77
LSM8-204ENST00000424702 Q5W150 140 aa4.01□□□□□ -1.77
LSM8-204ENST00000424702 SACSQ9NZJ4 4579 aa4.01□□□□□ -1.77
LSM8-204ENST00000424702 KRTAP4-5Q9BYR2 181 aa4.01□□□□□ -1.77
LSM8-204ENST00000424702 DYNC1H1Q14204 4646 aaKnown RBP4.01□□□□□ -1.77
LSM8-204ENST00000424702 M0R2T5 61 aa4□□□□□ -1.77
LSM8-204ENST00000424702 ACYP2P14621 99 aa4□□□□□ -1.77
LSM8-204ENST00000424702 CYP4F30PQ9H0H9 118 aa4□□□□□ -1.77
LSM8-204ENST00000424702 DNAH5Q8TE73 4624 aa3.99□□□□□ -1.77
LSM8-204ENST00000424702 HYDINQ4G0P3 5121 aa3.99□□□□□ -1.77
LSM8-204ENST00000424702 KRTAP13-3Q3SY46 172 aa3.98□□□□□ -1.77
LSM8-204ENST00000424702 MPLKIPQ8TAP9 179 aa3.98□□□□□ -1.77
LSM8-204ENST00000424702 A8MUU9 505 aa3.97□□□□□ -1.77
LSM8-204ENST00000424702 C20orf166-AS1Q96NR2 134 aa3.97□□□□□ -1.77
LSM8-204ENST00000424702 LRP1BQ9NZR2 4599 aa3.97□□□□□ -1.77
LSM8-204ENST00000424702 HRES1P13985 223 aa3.96□□□□□ -1.78
LSM8-204ENST00000424702 XP32Q5T750 250 aa3.96□□□□□ -1.78
LSM8-204ENST00000424702 COA5Q86WW8 74 aa3.95□□□□□ -1.78
LSM8-204ENST00000424702 BRK1Q8WUW1 75 aa3.95□□□□□ -1.78
LSM8-204ENST00000424702 KRTAP16-1A8MUX0 517 aa3.95□□□□□ -1.78
LSM8-204ENST00000424702 BIRC6Q9NR09 4857 aa3.95□□□□□ -1.78
LSM8-204ENST00000424702 SPINK7P58062 85 aa3.94□□□□□ -1.78
LSM8-204ENST00000424702 A8MUN3 132 aa3.92□□□□□ -1.78
LSM8-204ENST00000424702 LCE2BO14633 110 aa3.9□□□□□ -1.78
LSM8-204ENST00000424702 PRR15LQ9BU68 103 aa3.9□□□□□ -1.79
LSM8-204ENST00000424702 FAT1Q14517 4588 aa3.89□□□□□ -1.79
LSM8-204ENST00000424702 LCE2CQ5TA81 110 aa3.88□□□□□ -1.79
LSM8-204ENST00000424702 MYCBP2O75592 4640 aa3.88□□□□□ -1.79
LSM8-204ENST00000424702 KMT2CQ8NEZ4 4911 aaKnown RBP3.87□□□□□ -1.79
LSM8-204ENST00000424702 DMAC1Q96GE9 116 aa3.87□□□□□ -1.79
LSM8-204ENST00000424702 A6NED7 52 aa3.87□□□□□ -1.79
LSM8-204ENST00000424702 PSPHP1O15172 72 aa3.87□□□□□ -1.79
LSM8-204ENST00000424702 RYR1P21817 5038 aa3.87□□□□□ -1.79
LSM8-204ENST00000424702 KRTAP23-1A1A580 65 aa3.85□□□□□ -1.79
LSM8-204ENST00000424702 APOBP04114 4563 aaKnown RBP3.85□□□□□ -1.79
LSM8-204ENST00000424702 A0A1B0GU69 56 aa3.84□□□□□ -1.8
LSM8-204ENST00000424702 RYR3Q15413 4870 aa3.83□□□□□ -1.8
LSM8-204ENST00000424702 PKHD1L1Q86WI1 4243 aa3.83□□□□□ -1.8
LSM8-204ENST00000424702 CSAG1Q6PB30 78 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms