RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 A0A1W2PNM2 257 aa4.55□□□□□ -1.68
MDC1-204ENST00000422266 M0R2T5 61 aa4.55□□□□□ -1.68
MDC1-204ENST00000422266 MT1HP80294 61 aa4.55□□□□□ -1.68
MDC1-204ENST00000422266 LCE2DQ5TA82 110 aaPredicted RBP4.55□□□□□ -1.68
MDC1-204ENST00000422266 Q6ZQT0 140 aa4.55□□□□□ -1.68
MDC1-204ENST00000422266 DSCR8Q96T75 97 aa4.55□□□□□ -1.68
MDC1-204ENST00000422266 SIGMAR1Q99720 223 aa4.55□□□□□ -1.68
MDC1-204ENST00000422266 A8MUU9 505 aa4.54□□□□□ -1.68
MDC1-204ENST00000422266 CCKP06307 115 aa4.54□□□□□ -1.68
MDC1-204ENST00000422266 LINC00313P59037 77 aa4.54□□□□□ -1.68
MDC1-204ENST00000422266 IGKV4-1P06312 121 aa4.53□□□□□ -1.68
MDC1-204ENST00000422266 VPS25Q9BRG1 176 aa4.52□□□□□ -1.69
MDC1-204ENST00000422266 A0A1B0GW54 56 aa4.51□□□□□ -1.69
MDC1-204ENST00000422266 J3KT08 172 aa4.51□□□□□ -1.69
MDC1-204ENST00000422266 C8orf87E5RJ46 101 aa4.5□□□□□ -1.69
MDC1-204ENST00000422266 PDE6GP18545 87 aa4.5□□□□□ -1.69
MDC1-204ENST00000422266 DSCR10P59022 87 aa4.49□□□□□ -1.69
MDC1-204ENST00000422266 LINC00472Q9H8W2 130 aa4.49□□□□□ -1.69
MDC1-204ENST00000422266 KRTAP10-6P60371 365 aaPredicted RBP4.48□□□□□ -1.69
MDC1-204ENST00000422266 IGHV6-1A0A0B4J1U7 121 aa4.47□□□□□ -1.69
MDC1-204ENST00000422266 NDUFB1O75438 58 aa4.47□□□□□ -1.69
MDC1-204ENST00000422266 LORP23490 312 aaPredicted RBP4.47□□□□□ -1.69
MDC1-204ENST00000422266 FAM240AA0A1B0GVK7 77 aa4.46□□□□□ -1.7
MDC1-204ENST00000422266 LINC00846Q9NV44 126 aa4.46□□□□□ -1.7
MDC1-204ENST00000422266 A0A1B0GVX0 72 aa4.45□□□□□ -1.7
MDC1-204ENST00000422266 DEFB116Q30KQ4 102 aa4.45□□□□□ -1.7
MDC1-204ENST00000422266 RBM12B-AS1Q9P1G2 102 aa4.45□□□□□ -1.7
MDC1-204ENST00000422266 J3QR89 54 aa4.44□□□□□ -1.7
MDC1-204ENST00000422266 FAM236DA0A1B0GTK5 79 aa4.43□□□□□ -1.7
MDC1-204ENST00000422266 KRTAP16-1A8MUX0 517 aa4.43□□□□□ -1.7
MDC1-204ENST00000422266 K7ERU9 68 aa4.43□□□□□ -1.7
MDC1-204ENST00000422266 FAM236CP0DP71 79 aa4.43□□□□□ -1.7
MDC1-204ENST00000422266 Q6ZVQ6 151 aa4.43□□□□□ -1.7
MDC1-204ENST00000422266 FSIP2Q5CZC0 6907 aa4.42□□□□□ -1.7
MDC1-204ENST00000422266 ACYP1P07311 99 aa4.42□□□□□ -1.7
MDC1-204ENST00000422266 CRCT1Q9UGL9 99 aa4.42□□□□□ -1.7
MDC1-204ENST00000422266 NOTCH2NLQ7Z3S9 236 aa4.4□□□□□ -1.71
MDC1-204ENST00000422266 UBL5Q9BZL1 73 aa4.4□□□□□ -1.71
MDC1-204ENST00000422266 FLGP20930 4061 aaPredicted RBP4.39□□□□□ -1.71
MDC1-204ENST00000422266 A8MWP4 228 aa4.39□□□□□ -1.71
MDC1-204ENST00000422266 NREPQ16612 68 aa4.39□□□□□ -1.71
MDC1-204ENST00000422266 Q8N9P0 234 aaPredicted RBP4.38□□□□□ -1.71
MDC1-204ENST00000422266 ZCCHC13Q8WW36 166 aaKnown RBP4.38□□□□□ -1.71
MDC1-204ENST00000422266 BPY2O14599 106 aa4.36□□□□□ -1.71
MDC1-204ENST00000422266 C8orf17Q9NRJ1 99 aa4.36□□□□□ -1.71
MDC1-204ENST00000422266 IGKV3D-7A0A0C4DH55 119 aa4.35□□□□□ -1.71
MDC1-204ENST00000422266 HRES1P13985 223 aa4.35□□□□□ -1.71
MDC1-204ENST00000422266 LINC00643Q86TS7 51 aa4.35□□□□□ -1.71
MDC1-204ENST00000422266 PRR15Q8IV56 129 aa4.35□□□□□ -1.71
MDC1-204ENST00000422266 MPLKIPQ8TAP9 179 aa4.35□□□□□ -1.71
MDC1-204ENST00000422266 K7EQZ3 153 aa4.34□□□□□ -1.71
MDC1-204ENST00000422266 SPINK7P58062 85 aa4.34□□□□□ -1.71
MDC1-204ENST00000422266 CXCL6P80162 114 aa4.34□□□□□ -1.71
MDC1-204ENST00000422266 ATP5EP2Q5VTU8 51 aa4.34□□□□□ -1.71
MDC1-204ENST00000422266 Q8N9L7 120 aa4.34□□□□□ -1.71
MDC1-204ENST00000422266 MT-ATP8P03928 68 aa4.33□□□□□ -1.72
MDC1-204ENST00000422266 TMEM254Q8TBM7 123 aa4.32□□□□□ -1.72
MDC1-204ENST00000422266 MRPL34Q9BQ48 92 aaKnown RBP4.31□□□□□ -1.72
MDC1-204ENST00000422266 hDV103S1A0JD37 113 aa4.3□□□□□ -1.72
MDC1-204ENST00000422266 KRTAP9-8Q9BYQ0 159 aa4.3□□□□□ -1.72
MDC1-204ENST00000422266 A0A087WVE0 104 aa4.29□□□□□ -1.72
MDC1-204ENST00000422266 MMP24-AS1A0A0U1RRL7 71 aa4.29□□□□□ -1.72
MDC1-204ENST00000422266 WFDC13Q8IUB5 93 aa4.29□□□□□ -1.72
MDC1-204ENST00000422266 NDUFS5O43920 106 aa4.28□□□□□ -1.72
MDC1-204ENST00000422266 HIST1H4AP62805 103 aaKnown RBP4.28□□□□□ -1.72
MDC1-204ENST00000422266 HCG22E2RYF7 251 aa4.25□□□□□ -1.73
MDC1-204ENST00000422266 KRTAP10-10P60014 251 aa4.24□□□□□ -1.73
MDC1-204ENST00000422266 IMUPQ9GZP8 106 aa4.24□□□□□ -1.73
MDC1-204ENST00000422266 MT2AP02795 61 aa4.23□□□□□ -1.73
MDC1-204ENST00000422266 CASC2Q6XLA1 102 aa4.23□□□□□ -1.73
MDC1-204ENST00000422266 C7orf65Q6ZTY9 151 aa4.23□□□□□ -1.73
MDC1-204ENST00000422266 FAM236AA0A1B0GUQ0 79 aa4.21□□□□□ -1.74
MDC1-204ENST00000422266 FAM236BA0A1B0GV22 79 aa4.21□□□□□ -1.74
MDC1-204ENST00000422266 H1FX-AS1Q4G0G2 97 aa4.21□□□□□ -1.74
MDC1-204ENST00000422266 IGKV2D-30A0A075B6S6 120 aa4.19□□□□□ -1.74
MDC1-204ENST00000422266 IGKV2-30P06310 120 aa4.19□□□□□ -1.74
MDC1-204ENST00000422266 MT1FP04733 61 aa4.18□□□□□ -1.74
MDC1-204ENST00000422266 KRTAP9-3Q9BYQ3 159 aa4.17□□□□□ -1.74
MDC1-204ENST00000422266 TP53AIP1Q9HCN2 124 aa4.16□□□□□ -1.74
MDC1-204ENST00000422266 OCR1Q9BZK8 76 aa4.15□□□□□ -1.75
MDC1-204ENST00000422266 PCP4P48539 62 aa4.14□□□□□ -1.75
MDC1-204ENST00000422266 Q5W150 140 aa4.14□□□□□ -1.75
MDC1-204ENST00000422266 ATOX1O00244 68 aa4.13□□□□□ -1.75
MDC1-204ENST00000422266 SCGB1A1P11684 91 aa4.13□□□□□ -1.75
MDC1-204ENST00000422266 KRTAP9-7A8MTY7 169 aa4.12□□□□□ -1.75
MDC1-204ENST00000422266 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.12□□□□□ -1.75
MDC1-204ENST00000422266 LCE2BO14633 110 aa4.12□□□□□ -1.75
MDC1-204ENST00000422266 UQCRQO14949 82 aa4.11□□□□□ -1.75
MDC1-204ENST00000422266 C4orf26Q17RF5 130 aa4.1□□□□□ -1.75
MDC1-204ENST00000422266 TRAV7A0A075B6U4 112 aa4.09□□□□□ -1.75
MDC1-204ENST00000422266 TRAV22A0A0B4J277 110 aa4.09□□□□□ -1.75
MDC1-204ENST00000422266 H0Y9P7 68 aa4.08□□□□□ -1.76
MDC1-204ENST00000422266 SMIM20Q8N5G0 67 aa4.08□□□□□ -1.76
MDC1-204ENST00000422266 SERP2Q8N6R1 65 aa4.08□□□□□ -1.76
MDC1-204ENST00000422266 KRTAP19-1Q8IUB9 90 aa4.07□□□□□ -1.76
MDC1-204ENST00000422266 ANAPC13Q9BS18 74 aa4.07□□□□□ -1.76
MDC1-204ENST00000422266 USH2AO75445 5202 aa4.07□□□□□ -1.76
MDC1-204ENST00000422266 C1orf64Q8NEQ6 169 aa4.06□□□□□ -1.76
MDC1-204ENST00000422266 S4R3F8 94 aa4.06□□□□□ -1.76
MDC1-204ENST00000422266 CSAG1Q6PB30 78 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms