RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 RPS29P62273 56 aaKnown RBP7.72□□□□□ -1.17
TMEM50B-201ENST00000420455 TYMSOSQ8TAI1 123 aa7.72□□□□□ -1.17
TMEM50B-201ENST00000420455 KRTAP17-1Q9BYP8 105 aa7.71□□□□□ -1.17
TMEM50B-201ENST00000420455 TNXBP22105 4242 aa7.7□□□□□ -1.18
TMEM50B-201ENST00000420455 PRR26Q8N8Z3 221 aa7.7□□□□□ -1.18
TMEM50B-201ENST00000420455 CASC2Q6XLA1 102 aa7.69□□□□□ -1.18
TMEM50B-201ENST00000420455 Q5VSD8 79 aa7.69□□□□□ -1.18
TMEM50B-201ENST00000420455 SPINK1P00995 79 aa7.68□□□□□ -1.18
TMEM50B-201ENST00000420455 SPAG11AQ6PDA7 123 aa7.66□□□□□ -1.18
TMEM50B-201ENST00000420455 LIMD2Q9BT23 127 aa7.66□□□□□ -1.18
TMEM50B-201ENST00000420455 FAT3Q8TDW7 4589 aa7.66□□□□□ -1.18
TMEM50B-201ENST00000420455 NOTCH2NLQ7Z3S9 236 aa7.66□□□□□ -1.18
TMEM50B-201ENST00000420455 ZCCHC13Q8WW36 166 aaKnown RBP7.66□□□□□ -1.18
TMEM50B-201ENST00000420455 KIAA1109Q2LD37 5005 aa7.65□□□□□ -1.18
TMEM50B-201ENST00000420455 A0A1B0GVX0 72 aa7.65□□□□□ -1.18
TMEM50B-201ENST00000420455 C1orf195Q5TG92 126 aa7.65□□□□□ -1.18
TMEM50B-201ENST00000420455 NDUFB1O75438 58 aa7.64□□□□□ -1.19
TMEM50B-201ENST00000420455 LINC00304Q8N9R0 145 aa7.64□□□□□ -1.19
TMEM50B-201ENST00000420455 C8orf17Q9NRJ1 99 aa7.63□□□□□ -1.19
TMEM50B-201ENST00000420455 hDV103S1A0JD37 113 aa7.63□□□□□ -1.19
TMEM50B-201ENST00000420455 Q8N1X5 172 aa7.63□□□□□ -1.19
TMEM50B-201ENST00000420455 IGHV6-1A0A0B4J1U7 121 aa7.62□□□□□ -1.19
TMEM50B-201ENST00000420455 OXTP01178 125 aa7.62□□□□□ -1.19
TMEM50B-201ENST00000420455 NDUFC1O43677 76 aa7.61□□□□□ -1.19
TMEM50B-201ENST00000420455 C5orf47Q569G3 176 aa7.61□□□□□ -1.19
TMEM50B-201ENST00000420455 C4orf48Q5BLP8 95 aa7.61□□□□□ -1.19
TMEM50B-201ENST00000420455 KRTAP10-8P60410 259 aa7.61□□□□□ -1.19
TMEM50B-201ENST00000420455 FAM236DA0A1B0GTK5 79 aa7.6□□□□□ -1.19
TMEM50B-201ENST00000420455 FAM236CP0DP71 79 aa7.6□□□□□ -1.19
TMEM50B-201ENST00000420455 LRP1Q07954 4544 aaKnown RBP7.59□□□□□ -1.2
TMEM50B-201ENST00000420455 RPS28P62857 69 aaKnown RBP7.57□□□□□ -1.2
TMEM50B-201ENST00000420455 C8orf87E5RJ46 101 aa7.56□□□□□ -1.2
TMEM50B-201ENST00000420455 H0Y9P7 68 aa7.54□□□□□ -1.2
TMEM50B-201ENST00000420455 MRPL34Q9BQ48 92 aaKnown RBP7.53□□□□□ -1.2
TMEM50B-201ENST00000420455 LINC00208Q96KT6 92 aa7.52□□□□□ -1.21
TMEM50B-201ENST00000420455 TRAV22A0A0B4J277 110 aa7.51□□□□□ -1.21
TMEM50B-201ENST00000420455 MP68P56378 58 aa7.5□□□□□ -1.21
TMEM50B-201ENST00000420455 KRTAP16-1A8MUX0 517 aa7.5□□□□□ -1.21
TMEM50B-201ENST00000420455 TP53AIP1Q9HCN2 124 aa7.49□□□□□ -1.21
TMEM50B-201ENST00000420455 LINC00313P59037 77 aa7.48□□□□□ -1.21
TMEM50B-201ENST00000420455 MT1HL1P0DM35 61 aa7.48□□□□□ -1.21
TMEM50B-201ENST00000420455 ATP5EP56381 51 aaPredicted RBP7.48□□□□□ -1.21
TMEM50B-201ENST00000420455 H3BPC8 53 aa7.48□□□□□ -1.21
TMEM50B-201ENST00000420455 KRTAP13-3Q3SY46 172 aa7.48□□□□□ -1.21
TMEM50B-201ENST00000420455 SERP1Q9Y6X1 66 aa7.48□□□□□ -1.21
TMEM50B-201ENST00000420455 Q8N9P0 234 aaPredicted RBP7.47□□□□□ -1.21
TMEM50B-201ENST00000420455 C1orf64Q8NEQ6 169 aa7.47□□□□□ -1.21
TMEM50B-201ENST00000420455 BIRC6Q9NR09 4857 aa7.46□□□□□ -1.22
TMEM50B-201ENST00000420455 NDUFS5O43920 106 aa7.46□□□□□ -1.22
TMEM50B-201ENST00000420455 MYCBP2O75592 4640 aa7.45□□□□□ -1.22
TMEM50B-201ENST00000420455 Q5W150 140 aa7.45□□□□□ -1.22
TMEM50B-201ENST00000420455 FLG2Q5D862 2391 aaPredicted RBP7.44□□□□□ -1.22
TMEM50B-201ENST00000420455 HERC2O95714 4834 aa7.43□□□□□ -1.22
TMEM50B-201ENST00000420455 KRTAP4-5Q9BYR2 181 aa7.42□□□□□ -1.22
TMEM50B-201ENST00000420455 PRR4Q16378 134 aa7.4□□□□□ -1.23
TMEM50B-201ENST00000420455 CYP4F30PQ9H0H9 118 aa7.39□□□□□ -1.23
TMEM50B-201ENST00000420455 SPANXA2-OT1Q8N9U9 137 aa7.37□□□□□ -1.23
TMEM50B-201ENST00000420455 FP248Q71RG6 208 aaPredicted RBP7.37□□□□□ -1.23
TMEM50B-201ENST00000420455 PCOTHQ58A44 107 aa7.35□□□□□ -1.23
TMEM50B-201ENST00000420455 RETNLBQ9BQ08 111 aa7.34□□□□□ -1.23
TMEM50B-201ENST00000420455 ABCA13Q86UQ4 5058 aa7.34□□□□□ -1.23
TMEM50B-201ENST00000420455 C20orf166-AS1Q96NR2 134 aa7.33□□□□□ -1.24
TMEM50B-201ENST00000420455 IGLV7-46A0A075B6I9 117 aa7.32□□□□□ -1.24
TMEM50B-201ENST00000420455 A8MUU9 505 aa7.32□□□□□ -1.24
TMEM50B-201ENST00000420455 LOC101927531A0A1B0GV80 90 aa7.3□□□□□ -1.24
TMEM50B-201ENST00000420455 SMIM26A0A096LP01 95 aa7.29□□□□□ -1.24
TMEM50B-201ENST00000420455 C4orf26Q17RF5 130 aa7.28□□□□□ -1.24
TMEM50B-201ENST00000420455 C9orf92A6NGG3 77 aa7.26□□□□□ -1.25
TMEM50B-201ENST00000420455 IGKV2-30P06310 120 aa7.24□□□□□ -1.25
TMEM50B-201ENST00000420455 Q75L30 129 aa7.24□□□□□ -1.25
TMEM50B-201ENST00000420455 HRES1P13985 223 aa7.2□□□□□ -1.26
TMEM50B-201ENST00000420455 COA5Q86WW8 74 aa7.19□□□□□ -1.26
TMEM50B-201ENST00000420455 MPLKIPQ8TAP9 179 aa7.19□□□□□ -1.26
TMEM50B-201ENST00000420455 DMBT1Q9UGM3 2413 aaPredicted RBP7.17□□□□□ -1.26
TMEM50B-201ENST00000420455 TPRXLQ17RH7 258 aa7.16□□□□□ -1.26
TMEM50B-201ENST00000420455 XP32Q5T750 250 aa7.16□□□□□ -1.26
TMEM50B-201ENST00000420455 Q1T7F1 81 aa7.15□□□□□ -1.27
TMEM50B-201ENST00000420455 IGKV2D-30A0A075B6S6 120 aa7.14□□□□□ -1.27
TMEM50B-201ENST00000420455 RPL37P61927 97 aaKnown RBP7.14□□□□□ -1.27
TMEM50B-201ENST00000420455 DMAC1Q96GE9 116 aa7.13□□□□□ -1.27
TMEM50B-201ENST00000420455 C7orf65Q6ZTY9 151 aa7.09□□□□□ -1.27
TMEM50B-201ENST00000420455 J3QL48 77 aa7.08□□□□□ -1.28
TMEM50B-201ENST00000420455 LPAP08519 4548 aa7.06□□□□□ -1.28
TMEM50B-201ENST00000420455 PCLOQ9Y6V0 5065 aa7.05□□□□□ -1.28
TMEM50B-201ENST00000420455 ATP11AUNQ6ZP68 121 aa7.04□□□□□ -1.28
TMEM50B-201ENST00000420455 ACYP2P14621 99 aa7.04□□□□□ -1.28
TMEM50B-201ENST00000420455 PSPHP1O15172 72 aa7.03□□□□□ -1.28
TMEM50B-201ENST00000420455 SPINK7P58062 85 aa7.02□□□□□ -1.29
TMEM50B-201ENST00000420455 LRP2P98164 4655 aa7.01□□□□□ -1.29
TMEM50B-201ENST00000420455 A8MUN3 132 aa7.01□□□□□ -1.29
TMEM50B-201ENST00000420455 MUC17Q685J3 4493 aa7□□□□□ -1.29
TMEM50B-201ENST00000420455 Q5VV11 94 aa6.99□□□□□ -1.29
TMEM50B-201ENST00000420455 V9GYY9 64 aa6.99□□□□□ -1.29
TMEM50B-201ENST00000420455 KRTAP3-1Q9BYR8 98 aa6.97□□□□□ -1.29
TMEM50B-201ENST00000420455 LINC01558Q9Y6Z2 57 aa6.96□□□□□ -1.3
TMEM50B-201ENST00000420455 PRR15LQ9BU68 103 aa6.94□□□□□ -1.3
TMEM50B-201ENST00000420455 CHKB-CPT1BH3BT56 60 aa6.91□□□□□ -1.3
TMEM50B-201ENST00000420455 HMCN2Q8NDA2 5059 aa6.9□□□□□ -1.3
TMEM50B-201ENST00000420455 HERC1Q15751 4861 aa6.89□□□□□ -1.31
TMEM50B-201ENST00000420455 COX6B2Q6YFQ2 88 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms