RNA–Protein interactions for RNA: ENST00000418576.3

SEMA3B-202, Transcript of semaphorin 3B, humanhuman

TSL 2 BASIC

Gene SEMA3B, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-202ENST00000418576 A0A087WVE0 104 aa10.5□□□□□ -0.73
SEMA3B-202ENST00000418576 Q6ZVQ6 151 aa10.5□□□□□ -0.73
SEMA3B-202ENST00000418576 CXCL6P80162 114 aa10.49□□□□□ -0.73
SEMA3B-202ENST00000418576 FP248Q71RG6 208 aaPredicted RBP10.48□□□□□ -0.73
SEMA3B-202ENST00000418576 A0A1W2PNM2 257 aa10.47□□□□□ -0.73
SEMA3B-202ENST00000418576 IGLV7-46A0A075B6I9 117 aa10.44□□□□□ -0.74
SEMA3B-202ENST00000418576 A0A087WSZ3 146 aa10.44□□□□□ -0.74
SEMA3B-202ENST00000418576 TRAV7A0A075B6U4 112 aa10.42□□□□□ -0.74
SEMA3B-202ENST00000418576 ASB16-AS1Q495Z4 193 aa10.42□□□□□ -0.74
SEMA3B-202ENST00000418576 HMCN2Q8NDA2 5059 aa10.41□□□□□ -0.74
SEMA3B-202ENST00000418576 A0A1B0GW54 56 aa10.41□□□□□ -0.74
SEMA3B-202ENST00000418576 C1orf195Q5TG92 126 aa10.39□□□□□ -0.75
SEMA3B-202ENST00000418576 CYSTM1Q9H1C7 97 aa10.36□□□□□ -0.75
SEMA3B-202ENST00000418576 KLKP1Q107X0 134 aa10.34□□□□□ -0.75
SEMA3B-202ENST00000418576 TPRXLQ17RH7 258 aa10.34□□□□□ -0.75
SEMA3B-202ENST00000418576 NREPQ16612 68 aa10.32□□□□□ -0.76
SEMA3B-202ENST00000418576 NDUFC1O43677 76 aa10.31□□□□□ -0.76
SEMA3B-202ENST00000418576 C20orf197Q8N268 126 aa10.29□□□□□ -0.76
SEMA3B-202ENST00000418576 KRTAP13-3Q3SY46 172 aa10.28□□□□□ -0.76
SEMA3B-202ENST00000418576 C5orf47Q569G3 176 aa10.26□□□□□ -0.77
SEMA3B-202ENST00000418576 H7BZZ5 65 aa10.26□□□□□ -0.77
SEMA3B-202ENST00000418576 Q96NJ1 140 aa10.26□□□□□ -0.77
SEMA3B-202ENST00000418576 FAM236DA0A1B0GTK5 79 aa10.25□□□□□ -0.77
SEMA3B-202ENST00000418576 BPY2O14599 106 aa10.25□□□□□ -0.77
SEMA3B-202ENST00000418576 FAM236CP0DP71 79 aa10.25□□□□□ -0.77
SEMA3B-202ENST00000418576 IGKV4-1P06312 121 aa10.24□□□□□ -0.77
SEMA3B-202ENST00000418576 ATP5EP56381 51 aaPredicted RBP10.24□□□□□ -0.77
SEMA3B-202ENST00000418576 LINC00472Q9H8W2 130 aa10.24□□□□□ -0.77
SEMA3B-202ENST00000418576 SERP1Q9Y6X1 66 aa10.24□□□□□ -0.77
SEMA3B-202ENST00000418576 LPAP08519 4548 aa10.24□□□□□ -0.77
SEMA3B-202ENST00000418576 Q8N9L7 120 aa10.21□□□□□ -0.77
SEMA3B-202ENST00000418576 LRP2P98164 4655 aa10.21□□□□□ -0.77
SEMA3B-202ENST00000418576 C9orf92A6NGG3 77 aa10.19□□□□□ -0.78
SEMA3B-202ENST00000418576 DEFB116Q30KQ4 102 aa10.19□□□□□ -0.78
SEMA3B-202ENST00000418576 DSCR10P59022 87 aa10.16□□□□□ -0.78
SEMA3B-202ENST00000418576 XP32Q5T750 250 aa10.13□□□□□ -0.79
SEMA3B-202ENST00000418576 OCR1Q9BZK8 76 aa10.11□□□□□ -0.79
SEMA3B-202ENST00000418576 TMEM254Q8TBM7 123 aa10.11□□□□□ -0.79
SEMA3B-202ENST00000418576 UBR4Q5T4S7 5183 aa10.1□□□□□ -0.79
SEMA3B-202ENST00000418576 K7EQZ3 153 aa10.09□□□□□ -0.79
SEMA3B-202ENST00000418576 NDUFB1O75438 58 aa10.09□□□□□ -0.79
SEMA3B-202ENST00000418576 SMIM26A0A096LP01 95 aa10.09□□□□□ -0.79
SEMA3B-202ENST00000418576 SNURFQ9Y675 71 aa10.09□□□□□ -0.79
SEMA3B-202ENST00000418576 IGHV6-1A0A0B4J1U7 121 aa10.07□□□□□ -0.8
SEMA3B-202ENST00000418576 LINC00313P59037 77 aa10.07□□□□□ -0.8
SEMA3B-202ENST00000418576 A0A1B0GVX0 72 aa10.06□□□□□ -0.8
SEMA3B-202ENST00000418576 A8MWP4 228 aa10.06□□□□□ -0.8
SEMA3B-202ENST00000418576 A0A0U1RQV1 116 aa10.05□□□□□ -0.8
SEMA3B-202ENST00000418576 SEC61BP60468 96 aaKnown RBP10.03□□□□□ -0.8
SEMA3B-202ENST00000418576 C8orf87E5RJ46 101 aa10.03□□□□□ -0.8
SEMA3B-202ENST00000418576 C4orf26Q17RF5 130 aa10.02□□□□□ -0.81
SEMA3B-202ENST00000418576 HCG22E2RYF7 251 aa9.98□□□□□ -0.81
SEMA3B-202ENST00000418576 RPL37P61927 97 aaKnown RBP9.98□□□□□ -0.81
SEMA3B-202ENST00000418576 PRR15Q8IV56 129 aa9.98□□□□□ -0.81
SEMA3B-202ENST00000418576 NOTCH2NLQ7Z3S9 236 aa9.98□□□□□ -0.81
SEMA3B-202ENST00000418576 Q75L30 129 aa9.96□□□□□ -0.81
SEMA3B-202ENST00000418576 C20orf166-AS1Q96NR2 134 aa9.94□□□□□ -0.82
SEMA3B-202ENST00000418576 C8orf17Q9NRJ1 99 aa9.93□□□□□ -0.82
SEMA3B-202ENST00000418576 KRTAP16-1A8MUX0 517 aa9.93□□□□□ -0.82
SEMA3B-202ENST00000418576 A8MUU9 505 aa9.92□□□□□ -0.82
SEMA3B-202ENST00000418576 PCOTHQ58A44 107 aa9.91□□□□□ -0.82
SEMA3B-202ENST00000418576 ATP11AUNQ6ZP68 121 aa9.91□□□□□ -0.82
SEMA3B-202ENST00000418576 WFDC13Q8IUB5 93 aa9.88□□□□□ -0.83
SEMA3B-202ENST00000418576 ZCCHC13Q8WW36 166 aaKnown RBP9.88□□□□□ -0.83
SEMA3B-202ENST00000418576 MUC17Q685J3 4493 aa9.86□□□□□ -0.83
SEMA3B-202ENST00000418576 MMP24-AS1A0A0U1RRL7 71 aa9.86□□□□□ -0.83
SEMA3B-202ENST00000418576 CASC2Q6XLA1 102 aa9.86□□□□□ -0.83
SEMA3B-202ENST00000418576 RNF213Q63HN8 5207 aa9.85□□□□□ -0.83
SEMA3B-202ENST00000418576 PRO0628Q9UI54 55 aa9.85□□□□□ -0.83
SEMA3B-202ENST00000418576 hDV103S1A0JD37 113 aa9.83□□□□□ -0.84
SEMA3B-202ENST00000418576 Q8N9P0 234 aaPredicted RBP9.81□□□□□ -0.84
SEMA3B-202ENST00000418576 MRPL34Q9BQ48 92 aaKnown RBP9.81□□□□□ -0.84
SEMA3B-202ENST00000418576 CYP4F30PQ9H0H9 118 aa9.81□□□□□ -0.84
SEMA3B-202ENST00000418576 MUC2Q02817 5179 aa9.81□□□□□ -0.84
SEMA3B-202ENST00000418576 H3BPC8 53 aa9.8□□□□□ -0.84
SEMA3B-202ENST00000418576 MP68P56378 58 aa9.76□□□□□ -0.85
SEMA3B-202ENST00000418576 KRTAP4-1Q9BYQ7 146 aa9.75□□□□□ -0.85
SEMA3B-202ENST00000418576 NDUFS5O43920 106 aa9.74□□□□□ -0.85
SEMA3B-202ENST00000418576 Q1T7F1 81 aa9.73□□□□□ -0.85
SEMA3B-202ENST00000418576 SPANXA2-OT1Q8N9U9 137 aa9.71□□□□□ -0.85
SEMA3B-202ENST00000418576 C1orf64Q8NEQ6 169 aa9.7□□□□□ -0.86
SEMA3B-202ENST00000418576 TRAV22A0A0B4J277 110 aa9.68□□□□□ -0.86
SEMA3B-202ENST00000418576 H0Y9P7 68 aa9.67□□□□□ -0.86
SEMA3B-202ENST00000418576 V9GYY9 64 aa9.67□□□□□ -0.86
SEMA3B-202ENST00000418576 TP53AIP1Q9HCN2 124 aa9.65□□□□□ -0.86
SEMA3B-202ENST00000418576 MPLKIPQ8TAP9 179 aa9.65□□□□□ -0.87
SEMA3B-202ENST00000418576 LINC00208Q96KT6 92 aa9.63□□□□□ -0.87
SEMA3B-202ENST00000418576 BRK1Q8WUW1 75 aa9.58□□□□□ -0.88
SEMA3B-202ENST00000418576 SPINK7P58062 85 aa9.55□□□□□ -0.88
SEMA3B-202ENST00000418576 Q5W150 140 aa9.53□□□□□ -0.88
SEMA3B-202ENST00000418576 COX6B2Q6YFQ2 88 aa9.48□□□□□ -0.89
SEMA3B-202ENST00000418576 IGKV2D-30A0A075B6S6 120 aa9.45□□□□□ -0.9
SEMA3B-202ENST00000418576 IGKV2-30P06310 120 aa9.45□□□□□ -0.9
SEMA3B-202ENST00000418576 KRTAP19-2Q3LHN2 52 aa9.45□□□□□ -0.9
SEMA3B-202ENST00000418576 RBM12B-AS1Q9P1G2 102 aa9.45□□□□□ -0.9
SEMA3B-202ENST00000418576 HRES1P13985 223 aa9.45□□□□□ -0.9
SEMA3B-202ENST00000418576 C7orf65Q6ZTY9 151 aa9.45□□□□□ -0.9
SEMA3B-202ENST00000418576 FAT4Q6V0I7 4981 aa9.45□□□□□ -0.9
SEMA3B-202ENST00000418576 LCE2CQ5TA81 110 aa9.41□□□□□ -0.9
SEMA3B-202ENST00000418576 LOC101927531A0A1B0GV80 90 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms