RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 C5orf47Q569G3 176 aa9.67□□□□□ -0.86
SSBP3-205ENST00000417664 PRR26Q8N8Z3 221 aa9.67□□□□□ -0.86
SSBP3-205ENST00000417664 C1orf195Q5TG92 126 aa9.66□□□□□ -0.86
SSBP3-205ENST00000417664 NDUFC1O43677 76 aa9.65□□□□□ -0.86
SSBP3-205ENST00000417664 LINC00304Q8N9R0 145 aa9.65□□□□□ -0.86
SSBP3-205ENST00000417664 C8orf87E5RJ46 101 aa9.64□□□□□ -0.87
SSBP3-205ENST00000417664 CYSTM1Q9H1C7 97 aa9.64□□□□□ -0.87
SSBP3-205ENST00000417664 TMEM258P61165 79 aa9.63□□□□□ -0.87
SSBP3-205ENST00000417664 A0A0U1RQV1 116 aa9.62□□□□□ -0.87
SSBP3-205ENST00000417664 TP53AIP1Q9HCN2 124 aa9.62□□□□□ -0.87
SSBP3-205ENST00000417664 FAT1Q14517 4588 aa9.62□□□□□ -0.87
SSBP3-205ENST00000417664 RYR3Q15413 4870 aa9.61□□□□□ -0.87
SSBP3-205ENST00000417664 SNURFQ9Y675 71 aa9.61□□□□□ -0.87
SSBP3-205ENST00000417664 MRPL34Q9BQ48 92 aaKnown RBP9.6□□□□□ -0.87
SSBP3-205ENST00000417664 MP68P56378 58 aa9.58□□□□□ -0.88
SSBP3-205ENST00000417664 H3BPC8 53 aa9.58□□□□□ -0.88
SSBP3-205ENST00000417664 H7BZZ5 65 aa9.58□□□□□ -0.88
SSBP3-205ENST00000417664 Q5VSD8 79 aa9.58□□□□□ -0.88
SSBP3-205ENST00000417664 LINC00313P59037 77 aa9.55□□□□□ -0.88
SSBP3-205ENST00000417664 NOTCH2NLQ7Z3S9 236 aa9.55□□□□□ -0.88
SSBP3-205ENST00000417664 LCE2DQ5TA82 110 aaPredicted RBP9.55□□□□□ -0.88
SSBP3-205ENST00000417664 ZCCHC13Q8WW36 166 aaKnown RBP9.53□□□□□ -0.88
SSBP3-205ENST00000417664 TRAV22A0A0B4J277 110 aa9.52□□□□□ -0.89
SSBP3-205ENST00000417664 H0Y9P7 68 aa9.51□□□□□ -0.89
SSBP3-205ENST00000417664 NDUFS5O43920 106 aa9.5□□□□□ -0.89
SSBP3-205ENST00000417664 HSPG2P98160 4391 aa9.5□□□□□ -0.89
SSBP3-205ENST00000417664 PKHD1L1Q86WI1 4243 aa9.49□□□□□ -0.89
SSBP3-205ENST00000417664 ATP5EP56381 51 aaPredicted RBP9.48□□□□□ -0.89
SSBP3-205ENST00000417664 LINC00208Q96KT6 92 aa9.47□□□□□ -0.89
SSBP3-205ENST00000417664 FAM236DA0A1B0GTK5 79 aa9.46□□□□□ -0.89
SSBP3-205ENST00000417664 FAM236CP0DP71 79 aa9.46□□□□□ -0.89
SSBP3-205ENST00000417664 Q8N1X5 172 aa9.45□□□□□ -0.9
SSBP3-205ENST00000417664 Q8N9P0 234 aaPredicted RBP9.45□□□□□ -0.9
SSBP3-205ENST00000417664 KRTAP10-8P60410 259 aa9.44□□□□□ -0.9
SSBP3-205ENST00000417664 C1orf64Q8NEQ6 169 aa9.43□□□□□ -0.9
SSBP3-205ENST00000417664 RYR1P21817 5038 aa9.43□□□□□ -0.9
SSBP3-205ENST00000417664 KRTAP16-1A8MUX0 517 aa9.42□□□□□ -0.9
SSBP3-205ENST00000417664 RPS28P62857 69 aaKnown RBP9.41□□□□□ -0.9
SSBP3-205ENST00000417664 KRTAP13-3Q3SY46 172 aa9.35□□□□□ -0.91
SSBP3-205ENST00000417664 LOC101927531A0A1B0GV80 90 aa9.34□□□□□ -0.91
SSBP3-205ENST00000417664 KRTAP17-1Q9BYP8 105 aa9.34□□□□□ -0.91
SSBP3-205ENST00000417664 SPANXA2-OT1Q8N9U9 137 aa9.33□□□□□ -0.92
SSBP3-205ENST00000417664 Q5W150 140 aa9.32□□□□□ -0.92
SSBP3-205ENST00000417664 SERP1Q9Y6X1 66 aa9.32□□□□□ -0.92
SSBP3-205ENST00000417664 FLG2Q5D862 2391 aaPredicted RBP9.32□□□□□ -0.92
SSBP3-205ENST00000417664 KIAA1109Q2LD37 5005 aa9.29□□□□□ -0.92
SSBP3-205ENST00000417664 CYP4F30PQ9H0H9 118 aa9.28□□□□□ -0.92
SSBP3-205ENST00000417664 FP248Q71RG6 208 aaPredicted RBP9.27□□□□□ -0.93
SSBP3-205ENST00000417664 TNXBP22105 4242 aa9.26□□□□□ -0.93
SSBP3-205ENST00000417664 RETNLBQ9BQ08 111 aa9.26□□□□□ -0.93
SSBP3-205ENST00000417664 OXTP01178 125 aa9.25□□□□□ -0.93
SSBP3-205ENST00000417664 EPPK1P58107 5090 aaKnown RBP9.25□□□□□ -0.93
SSBP3-205ENST00000417664 LRP1Q07954 4544 aaKnown RBP9.24□□□□□ -0.93
SSBP3-205ENST00000417664 IGLV7-46A0A075B6I9 117 aa9.23□□□□□ -0.93
SSBP3-205ENST00000417664 MT1HL1P0DM35 61 aa9.23□□□□□ -0.93
SSBP3-205ENST00000417664 C20orf166-AS1Q96NR2 134 aa9.23□□□□□ -0.93
SSBP3-205ENST00000417664 A8MUU9 505 aa9.21□□□□□ -0.93
SSBP3-205ENST00000417664 PCOTHQ58A44 107 aa9.21□□□□□ -0.93
SSBP3-205ENST00000417664 IGKV2-30P06310 120 aa9.2□□□□□ -0.94
SSBP3-205ENST00000417664 FAT3Q8TDW7 4589 aa9.2□□□□□ -0.94
SSBP3-205ENST00000417664 C9orf92A6NGG3 77 aa9.2□□□□□ -0.94
SSBP3-205ENST00000417664 DMBT1Q9UGM3 2413 aaPredicted RBP9.16□□□□□ -0.94
SSBP3-205ENST00000417664 PRR4Q16378 134 aa9.15□□□□□ -0.94
SSBP3-205ENST00000417664 Q75L30 129 aa9.13□□□□□ -0.95
SSBP3-205ENST00000417664 SMIM26A0A096LP01 95 aa9.1□□□□□ -0.95
SSBP3-205ENST00000417664 IGKV2D-30A0A075B6S6 120 aa9.08□□□□□ -0.96
SSBP3-205ENST00000417664 C7orf65Q6ZTY9 151 aa9.08□□□□□ -0.96
SSBP3-205ENST00000417664 KRTAP4-5Q9BYR2 181 aa9.07□□□□□ -0.96
SSBP3-205ENST00000417664 MYCBP2O75592 4640 aa9.07□□□□□ -0.96
SSBP3-205ENST00000417664 HRES1P13985 223 aa9.07□□□□□ -0.96
SSBP3-205ENST00000417664 DMAC1Q96GE9 116 aa9□□□□□ -0.97
SSBP3-205ENST00000417664 ACYP2P14621 99 aa9□□□□□ -0.97
SSBP3-205ENST00000417664 COA5Q86WW8 74 aa9□□□□□ -0.97
SSBP3-205ENST00000417664 RPL37P61927 97 aaKnown RBP8.98□□□□□ -0.97
SSBP3-205ENST00000417664 ATP11AUNQ6ZP68 121 aa8.98□□□□□ -0.97
SSBP3-205ENST00000417664 XP32Q5T750 250 aa8.97□□□□□ -0.97
SSBP3-205ENST00000417664 TPRXLQ17RH7 258 aa8.96□□□□□ -0.98
SSBP3-205ENST00000417664 SPINK7P58062 85 aa8.92□□□□□ -0.98
SSBP3-205ENST00000417664 A8MUN3 132 aa8.91□□□□□ -0.98
SSBP3-205ENST00000417664 J3QL48 77 aa8.9□□□□□ -0.98
SSBP3-205ENST00000417664 V9GYY9 64 aa8.9□□□□□ -0.98
SSBP3-205ENST00000417664 BIRC6Q9NR09 4857 aa8.9□□□□□ -0.99
SSBP3-205ENST00000417664 Q1T7F1 81 aa8.89□□□□□ -0.99
SSBP3-205ENST00000417664 MPLKIPQ8TAP9 179 aa8.86□□□□□ -0.99
SSBP3-205ENST00000417664 HERC2O95714 4834 aa8.84□□□□□ -0.99
SSBP3-205ENST00000417664 CHKB-CPT1BH3BT56 60 aa8.83□□□□□ -1
SSBP3-205ENST00000417664 C4orf26Q17RF5 130 aa8.82□□□□□ -1
SSBP3-205ENST00000417664 KRTAP3-3Q9BYR6 98 aa8.8□□□□□ -1
SSBP3-205ENST00000417664 KRTAP3-2Q9BYR7 98 aa8.8□□□□□ -1
SSBP3-205ENST00000417664 ABCA13Q86UQ4 5058 aa8.77□□□□□ -1
SSBP3-205ENST00000417664 COX6B2Q6YFQ2 88 aa8.75□□□□□ -1.01
SSBP3-205ENST00000417664 LINC01558Q9Y6Z2 57 aa8.72□□□□□ -1.01
SSBP3-205ENST00000417664 KRTAP3-1Q9BYR8 98 aa8.7□□□□□ -1.02
SSBP3-205ENST00000417664 SPTSSBQ8NFR3 76 aa8.67□□□□□ -1.02
SSBP3-205ENST00000417664 PSPHP1O15172 72 aa8.65□□□□□ -1.02
SSBP3-205ENST00000417664 SEC61BP60468 96 aaKnown RBP8.65□□□□□ -1.03
SSBP3-205ENST00000417664 PRR15LQ9BU68 103 aa8.63□□□□□ -1.03
SSBP3-205ENST00000417664 Q5VV11 94 aa8.61□□□□□ -1.03
SSBP3-205ENST00000417664 LRP2P98164 4655 aa8.59□□□□□ -1.03
SSBP3-205ENST00000417664 LPAP08519 4548 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms