RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 PRR4Q16378 134 aa6.97□□□□□ -1.29
RFFL-205ENST00000415395 LINC00483Q53H64 154 aa6.97□□□□□ -1.29
RFFL-205ENST00000415395 LIMD2Q9BT23 127 aa6.97□□□□□ -1.29
RFFL-205ENST00000415395 MMP24-AS1A0A0U1RRL7 71 aa6.96□□□□□ -1.3
RFFL-205ENST00000415395 CDK2AP2O75956 126 aa6.94□□□□□ -1.3
RFFL-205ENST00000415395 PKHD1P08F94 4074 aa6.94□□□□□ -1.3
RFFL-205ENST00000415395 PSPHP1O15172 72 aa6.92□□□□□ -1.3
RFFL-205ENST00000415395 LRP1BQ9NZR2 4599 aa6.92□□□□□ -1.3
RFFL-205ENST00000415395 SRRM2Q9UQ35 2752 aaKnown RBP6.91□□□□□ -1.3
RFFL-205ENST00000415395 IGLV7-46A0A075B6I9 117 aa6.91□□□□□ -1.3
RFFL-205ENST00000415395 DYNC1H1Q14204 4646 aaKnown RBP6.9□□□□□ -1.3
RFFL-205ENST00000415395 IGLV9-49A0A0B4J1Y8 123 aa6.9□□□□□ -1.31
RFFL-205ENST00000415395 C8orf17Q9NRJ1 99 aa6.9□□□□□ -1.31
RFFL-205ENST00000415395 ASB16-AS1Q495Z4 193 aa6.89□□□□□ -1.31
RFFL-205ENST00000415395 A0A1B0GVX0 72 aa6.87□□□□□ -1.31
RFFL-205ENST00000415395 A8MUN3 132 aa6.87□□□□□ -1.31
RFFL-205ENST00000415395 Q8N9P0 234 aaPredicted RBP6.87□□□□□ -1.31
RFFL-205ENST00000415395 Q96NJ1 140 aa6.87□□□□□ -1.31
RFFL-205ENST00000415395 COA5Q86WW8 74 aa6.86□□□□□ -1.31
RFFL-205ENST00000415395 NDUFS5O43920 106 aa6.84□□□□□ -1.31
RFFL-205ENST00000415395 Q5VV11 94 aa6.84□□□□□ -1.31
RFFL-205ENST00000415395 SPINK6Q6UWN8 80 aa6.84□□□□□ -1.31
RFFL-205ENST00000415395 MRPL34Q9BQ48 92 aaKnown RBP6.84□□□□□ -1.31
RFFL-205ENST00000415395 PRR15LQ9BU68 103 aa6.84□□□□□ -1.31
RFFL-205ENST00000415395 IGHV6-1A0A0B4J1U7 121 aa6.83□□□□□ -1.32
RFFL-205ENST00000415395 CHKB-CPT1BH3BT56 60 aa6.83□□□□□ -1.32
RFFL-205ENST00000415395 APOBP04114 4563 aaKnown RBP6.83□□□□□ -1.32
RFFL-205ENST00000415395 VPS13BQ7Z7G8 4022 aa6.83□□□□□ -1.32
RFFL-205ENST00000415395 Q75L30 129 aa6.82□□□□□ -1.32
RFFL-205ENST00000415395 LOC101927531A0A1B0GV80 90 aa6.81□□□□□ -1.32
RFFL-205ENST00000415395 SSBP3-AS1Q7Z2R9 100 aa6.81□□□□□ -1.32
RFFL-205ENST00000415395 RYR3Q15413 4870 aa6.81□□□□□ -1.32
RFFL-205ENST00000415395 PMAIP1Q13794 54 aa6.81□□□□□ -1.32
RFFL-205ENST00000415395 ANAPC11Q9NYG5 84 aa6.81□□□□□ -1.32
RFFL-205ENST00000415395 PCOTHQ58A44 107 aa6.8□□□□□ -1.32
RFFL-205ENST00000415395 SMR3BP02814 79 aaPredicted RBP6.79□□□□□ -1.32
RFFL-205ENST00000415395 KRTAP1-4P0C5Y4 121 aa6.79□□□□□ -1.32
RFFL-205ENST00000415395 CD164Q04900 197 aa6.79□□□□□ -1.32
RFFL-205ENST00000415395 KRTAP10-4P60372 401 aaPredicted RBP6.78□□□□□ -1.32
RFFL-205ENST00000415395 LINC01558Q9Y6Z2 57 aa6.77□□□□□ -1.33
RFFL-205ENST00000415395 C8orf87E5RJ46 101 aa6.76□□□□□ -1.33
RFFL-205ENST00000415395 PLA2G1BP04054 148 aaKnown RBP6.76□□□□□ -1.33
RFFL-205ENST00000415395 A0A087X002 238 aa6.76□□□□□ -1.33
RFFL-205ENST00000415395 A6NED7 52 aa6.76□□□□□ -1.33
RFFL-205ENST00000415395 FAM229AH3BQW9 127 aa6.76□□□□□ -1.33
RFFL-205ENST00000415395 KRTAP13-2Q52LG2 175 aa6.74□□□□□ -1.33
RFFL-205ENST00000415395 ATP11AUNQ6ZP68 121 aa6.74□□□□□ -1.33
RFFL-205ENST00000415395 CDC42SE1Q9NRR8 79 aa6.72□□□□□ -1.33
RFFL-205ENST00000415395 HRES1P13985 223 aa6.7□□□□□ -1.34
RFFL-205ENST00000415395 ACYP2P14621 99 aa6.69□□□□□ -1.34
RFFL-205ENST00000415395 SPAG11AQ6PDA7 123 aa6.69□□□□□ -1.34
RFFL-205ENST00000415395 TYMSOSQ8TAI1 123 aa6.69□□□□□ -1.34
RFFL-205ENST00000415395 FAT1Q14517 4588 aa6.69□□□□□ -1.34
RFFL-205ENST00000415395 SEC61GP60059 68 aa6.68□□□□□ -1.34
RFFL-205ENST00000415395 Q5VSD8 79 aa6.67□□□□□ -1.34
RFFL-205ENST00000415395 PKHD1L1Q86WI1 4243 aa6.67□□□□□ -1.34
RFFL-205ENST00000415395 HSPG2P98160 4391 aa6.66□□□□□ -1.34
RFFL-205ENST00000415395 SPTSSBQ8NFR3 76 aa6.66□□□□□ -1.34
RFFL-205ENST00000415395 C4orf48Q5BLP8 95 aa6.65□□□□□ -1.34
RFFL-205ENST00000415395 SPINK1P00995 79 aa6.64□□□□□ -1.35
RFFL-205ENST00000415395 RPS29P62273 56 aaKnown RBP6.64□□□□□ -1.35
RFFL-205ENST00000415395 KTN1-AS1Q86SY8 53 aa6.64□□□□□ -1.35
RFFL-205ENST00000415395 PRR26Q8N8Z3 221 aa6.64□□□□□ -1.35
RFFL-205ENST00000415395 KRTAP13-3Q3SY46 172 aa6.64□□□□□ -1.35
RFFL-205ENST00000415395 LCA10Q71F78 164 aa6.64□□□□□ -1.35
RFFL-205ENST00000415395 NOTCH2NLQ7Z3S9 236 aa6.64□□□□□ -1.35
RFFL-205ENST00000415395 LINC00313P59037 77 aa6.63□□□□□ -1.35
RFFL-205ENST00000415395 RYR1P21817 5038 aa6.63□□□□□ -1.35
RFFL-205ENST00000415395 Q8N1X5 172 aa6.62□□□□□ -1.35
RFFL-205ENST00000415395 LINC00304Q8N9R0 145 aa6.62□□□□□ -1.35
RFFL-205ENST00000415395 Q5W150 140 aa6.6□□□□□ -1.35
RFFL-205ENST00000415395 DMAC1Q96GE9 116 aa6.6□□□□□ -1.35
RFFL-205ENST00000415395 A8MU10 97 aa6.59□□□□□ -1.36
RFFL-205ENST00000415395 A6NN06 94 aa6.57□□□□□ -1.36
RFFL-205ENST00000415395 EPPK1P58107 5090 aaKnown RBP6.56□□□□□ -1.36
RFFL-205ENST00000415395 IGKV2-30P06310 120 aa6.56□□□□□ -1.36
RFFL-205ENST00000415395 SPINK7P58062 85 aa6.54□□□□□ -1.36
RFFL-205ENST00000415395 C7orf65Q6ZTY9 151 aa6.54□□□□□ -1.36
RFFL-205ENST00000415395 KIAA1109Q2LD37 5005 aa6.54□□□□□ -1.36
RFFL-205ENST00000415395 KRTAP10-8P60410 259 aa6.53□□□□□ -1.36
RFFL-205ENST00000415395 KRTAP17-1Q9BYP8 105 aa6.53□□□□□ -1.36
RFFL-205ENST00000415395 A0A1B0GU69 56 aa6.52□□□□□ -1.37
RFFL-205ENST00000415395 KRTAP16-1A8MUX0 517 aa6.46□□□□□ -1.38
RFFL-205ENST00000415395 FAT3Q8TDW7 4589 aa6.45□□□□□ -1.38
RFFL-205ENST00000415395 TNXBP22105 4242 aa6.44□□□□□ -1.38
RFFL-205ENST00000415395 RETNLBQ9BQ08 111 aa6.44□□□□□ -1.38
RFFL-205ENST00000415395 RBM12B-AS1Q9P1G2 102 aa6.44□□□□□ -1.38
RFFL-205ENST00000415395 FLG2Q5D862 2391 aaPredicted RBP6.44□□□□□ -1.38
RFFL-205ENST00000415395 UQCR11O14957 56 aa6.43□□□□□ -1.38
RFFL-205ENST00000415395 LRP1Q07954 4544 aaKnown RBP6.42□□□□□ -1.38
RFFL-205ENST00000415395 IGKV2D-30A0A075B6S6 120 aa6.42□□□□□ -1.38
RFFL-205ENST00000415395 MT1HL1P0DM35 61 aa6.42□□□□□ -1.38
RFFL-205ENST00000415395 SPATA8Q6RVD6 105 aa6.42□□□□□ -1.38
RFFL-205ENST00000415395 MIR22HGQ0VDD5 57 aa6.39□□□□□ -1.39
RFFL-205ENST00000415395 KRTAP4-5Q9BYR2 181 aa6.37□□□□□ -1.39
RFFL-205ENST00000415395 BIRC6Q9NR09 4857 aa6.36□□□□□ -1.39
RFFL-205ENST00000415395 MYCBP2O75592 4640 aa6.34□□□□□ -1.39
RFFL-205ENST00000415395 DMBT1Q9UGM3 2413 aaPredicted RBP6.32□□□□□ -1.4
RFFL-205ENST00000415395 HERC2O95714 4834 aa6.3□□□□□ -1.4
RFFL-205ENST00000415395 C20orf166-AS1Q96NR2 134 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms