RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 ZNF861PO60384 105 aa6.01□□□□□ -1.45
DDB1-202ENST00000414411 SPRR1BP22528 89 aa6.01□□□□□ -1.45
DDB1-202ENST00000414411 PKHD1L1Q86WI1 4243 aa6.01□□□□□ -1.45
DDB1-202ENST00000414411 A0A0G2JQZ4 141 aa6□□□□□ -1.45
DDB1-202ENST00000414411 NDUFS5O43920 106 aa6□□□□□ -1.45
DDB1-202ENST00000414411 UBE2AP49459 152 aa6□□□□□ -1.45
DDB1-202ENST00000414411 KRTAP4-5Q9BYR2 181 aa5.99□□□□□ -1.45
DDB1-202ENST00000414411 DSCR10P59022 87 aa5.99□□□□□ -1.45
DDB1-202ENST00000414411 OCR1Q9BZK8 76 aa5.99□□□□□ -1.45
DDB1-202ENST00000414411 ABCA13Q86UQ4 5058 aa5.98□□□□□ -1.45
DDB1-202ENST00000414411 IGLV9-49A0A0B4J1Y8 123 aa5.98□□□□□ -1.45
DDB1-202ENST00000414411 H7BZZ5 65 aa5.98□□□□□ -1.45
DDB1-202ENST00000414411 SPINK6Q6UWN8 80 aa5.97□□□□□ -1.45
DDB1-202ENST00000414411 SNURFQ9Y675 71 aa5.97□□□□□ -1.45
DDB1-202ENST00000414411 K7EQZ3 153 aa5.97□□□□□ -1.45
DDB1-202ENST00000414411 FLG2Q5D862 2391 aaPredicted RBP5.97□□□□□ -1.45
DDB1-202ENST00000414411 A0A087WSZ3 146 aa5.96□□□□□ -1.46
DDB1-202ENST00000414411 TMEM254Q8TBM7 123 aa5.95□□□□□ -1.46
DDB1-202ENST00000414411 MYCBP2O75592 4640 aa5.94□□□□□ -1.46
DDB1-202ENST00000414411 NDUFC1O43677 76 aa5.93□□□□□ -1.46
DDB1-202ENST00000414411 LRP1Q07954 4544 aaKnown RBP5.93□□□□□ -1.46
DDB1-202ENST00000414411 HCG22E2RYF7 251 aa5.91□□□□□ -1.46
DDB1-202ENST00000414411 KRTAP1-4P0C5Y4 121 aa5.91□□□□□ -1.46
DDB1-202ENST00000414411 DEFB116Q30KQ4 102 aa5.91□□□□□ -1.46
DDB1-202ENST00000414411 FAT3Q8TDW7 4589 aa5.91□□□□□ -1.46
DDB1-202ENST00000414411 PRR15Q8IV56 129 aa5.9□□□□□ -1.46
DDB1-202ENST00000414411 PCLOQ9Y6V0 5065 aa5.9□□□□□ -1.47
DDB1-202ENST00000414411 SMIM26A0A096LP01 95 aa5.89□□□□□ -1.47
DDB1-202ENST00000414411 LINC00483Q53H64 154 aa5.89□□□□□ -1.47
DDB1-202ENST00000414411 LINC00472Q9H8W2 130 aa5.88□□□□□ -1.47
DDB1-202ENST00000414411 ZNF706Q9Y5V0 76 aaPredicted RBP5.88□□□□□ -1.47
DDB1-202ENST00000414411 ANAPC11Q9NYG5 84 aa5.87□□□□□ -1.47
DDB1-202ENST00000414411 MP68P56378 58 aa5.87□□□□□ -1.47
DDB1-202ENST00000414411 ATP5EP56381 51 aaPredicted RBP5.87□□□□□ -1.47
DDB1-202ENST00000414411 BRK1Q8WUW1 75 aa5.87□□□□□ -1.47
DDB1-202ENST00000414411 SERP1Q9Y6X1 66 aa5.87□□□□□ -1.47
DDB1-202ENST00000414411 A8MWP4 228 aa5.86□□□□□ -1.47
DDB1-202ENST00000414411 FAM229BQ4G0N7 80 aa5.86□□□□□ -1.47
DDB1-202ENST00000414411 WFDC13Q8IUB5 93 aa5.86□□□□□ -1.47
DDB1-202ENST00000414411 A0A087X002 238 aa5.85□□□□□ -1.47
DDB1-202ENST00000414411 KRTAP29-1A8MX34 341 aaPredicted RBP5.85□□□□□ -1.47
DDB1-202ENST00000414411 TNXBP22105 4242 aa5.85□□□□□ -1.47
DDB1-202ENST00000414411 PSPHP1O15172 72 aa5.84□□□□□ -1.47
DDB1-202ENST00000414411 KTN1-AS1Q86SY8 53 aa5.84□□□□□ -1.47
DDB1-202ENST00000414411 XP32Q5T750 250 aa5.84□□□□□ -1.48
DDB1-202ENST00000414411 NOTCH2NLQ7Z3S9 236 aa5.84□□□□□ -1.48
DDB1-202ENST00000414411 KRTAP13-2Q52LG2 175 aa5.83□□□□□ -1.48
DDB1-202ENST00000414411 ZCCHC13Q8WW36 166 aaKnown RBP5.83□□□□□ -1.48
DDB1-202ENST00000414411 KRTAP10-8P60410 259 aa5.82□□□□□ -1.48
DDB1-202ENST00000414411 IGHV6-1A0A0B4J1U7 121 aa5.82□□□□□ -1.48
DDB1-202ENST00000414411 A8MUN3 132 aa5.82□□□□□ -1.48
DDB1-202ENST00000414411 CASC2Q6XLA1 102 aa5.82□□□□□ -1.48
DDB1-202ENST00000414411 MOBPQ13875 183 aa5.81□□□□□ -1.48
DDB1-202ENST00000414411 Q96NJ1 140 aa5.81□□□□□ -1.48
DDB1-202ENST00000414411 DMBT1Q9UGM3 2413 aaPredicted RBP5.81□□□□□ -1.48
DDB1-202ENST00000414411 MT1HL1P0DM35 61 aa5.8□□□□□ -1.48
DDB1-202ENST00000414411 LINC00313P59037 77 aa5.8□□□□□ -1.48
DDB1-202ENST00000414411 MMP24-AS1A0A0U1RRL7 71 aa5.78□□□□□ -1.48
DDB1-202ENST00000414411 NDUFB1O75438 58 aa5.78□□□□□ -1.48
DDB1-202ENST00000414411 SSBP3-AS1Q7Z2R9 100 aa5.77□□□□□ -1.49
DDB1-202ENST00000414411 TYMSOSQ8TAI1 123 aa5.77□□□□□ -1.49
DDB1-202ENST00000414411 hDV103S1A0JD37 113 aa5.75□□□□□ -1.49
DDB1-202ENST00000414411 KRTAP23-1A1A580 65 aa5.74□□□□□ -1.49
DDB1-202ENST00000414411 ASB16-AS1Q495Z4 193 aa5.74□□□□□ -1.49
DDB1-202ENST00000414411 TRAV22A0A0B4J277 110 aa5.74□□□□□ -1.49
DDB1-202ENST00000414411 H0Y9P7 68 aa5.74□□□□□ -1.49
DDB1-202ENST00000414411 H3BPC8 53 aa5.74□□□□□ -1.49
DDB1-202ENST00000414411 FP248Q71RG6 208 aaPredicted RBP5.74□□□□□ -1.49
DDB1-202ENST00000414411 LCA10Q71F78 164 aa5.73□□□□□ -1.49
DDB1-202ENST00000414411 LINC00208Q96KT6 92 aa5.73□□□□□ -1.49
DDB1-202ENST00000414411 A0A1B0GVX0 72 aa5.72□□□□□ -1.49
DDB1-202ENST00000414411 C8orf17Q9NRJ1 99 aa5.72□□□□□ -1.49
DDB1-202ENST00000414411 LINC00304Q8N9R0 145 aa5.71□□□□□ -1.5
DDB1-202ENST00000414411 CYP4F30PQ9H0H9 118 aa5.7□□□□□ -1.5
DDB1-202ENST00000414411 HERC1Q15751 4861 aa5.7□□□□□ -1.5
DDB1-202ENST00000414411 SPAG11AQ6PDA7 123 aa5.69□□□□□ -1.5
DDB1-202ENST00000414411 TP53AIP1Q9HCN2 124 aa5.69□□□□□ -1.5
DDB1-202ENST00000414411 C1orf64Q8NEQ6 169 aa5.68□□□□□ -1.5
DDB1-202ENST00000414411 SPINK1P00995 79 aa5.68□□□□□ -1.5
DDB1-202ENST00000414411 PRR4Q16378 134 aa5.67□□□□□ -1.5
DDB1-202ENST00000414411 LOC100996750A0A140TA64 210 aa5.66□□□□□ -1.5
DDB1-202ENST00000414411 SPANXA2-OT1Q8N9U9 137 aa5.66□□□□□ -1.5
DDB1-202ENST00000414411 KRTAP4-6Q9BYQ5 205 aa5.66□□□□□ -1.5
DDB1-202ENST00000414411 RPS29P62273 56 aaKnown RBP5.66□□□□□ -1.5
DDB1-202ENST00000414411 MRPL34Q9BQ48 92 aaKnown RBP5.66□□□□□ -1.5
DDB1-202ENST00000414411 PRAC1Q96KF2 57 aa5.64□□□□□ -1.51
DDB1-202ENST00000414411 MPLKIPQ8TAP9 179 aa5.63□□□□□ -1.51
DDB1-202ENST00000414411 KRTAP3-1Q9BYR8 98 aa5.62□□□□□ -1.51
DDB1-202ENST00000414411 LIMD2Q9BT23 127 aa5.6□□□□□ -1.51
DDB1-202ENST00000414411 IGLV7-46A0A075B6I9 117 aa5.58□□□□□ -1.52
DDB1-202ENST00000414411 LINC01554Q52M75 96 aa5.58□□□□□ -1.52
DDB1-202ENST00000414411 Q1T7F1 81 aa5.58□□□□□ -1.52
DDB1-202ENST00000414411 KRTAP19-4Q3LI73 84 aa5.58□□□□□ -1.52
DDB1-202ENST00000414411 PCOTHQ58A44 107 aa5.58□□□□□ -1.52
DDB1-202ENST00000414411 KRTAP13-3Q3SY46 172 aa5.56□□□□□ -1.52
DDB1-202ENST00000414411 RETNLBQ9BQ08 111 aa5.56□□□□□ -1.52
DDB1-202ENST00000414411 HMCN2Q8NDA2 5059 aa5.56□□□□□ -1.52
DDB1-202ENST00000414411 Q5W150 140 aa5.55□□□□□ -1.52
DDB1-202ENST00000414411 LOC101927531A0A1B0GV80 90 aa5.54□□□□□ -1.52
DDB1-202ENST00000414411 C7orf65Q6ZTY9 151 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 184.9 ms