RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 A0A0U1RQV1 116 aa11.25□□□□□ -0.61
LMO2-203ENST00000411482 PLA2G1BP04054 148 aaKnown RBP11.25□□□□□ -0.61
LMO2-203ENST00000411482 FLG2Q5D862 2391 aaPredicted RBP11.25□□□□□ -0.61
LMO2-203ENST00000411482 Q5XG85 94 aa11.25□□□□□ -0.61
LMO2-203ENST00000411482 CASC2Q6XLA1 102 aa11.25□□□□□ -0.61
LMO2-203ENST00000411482 MMP24-AS1A0A0U1RRL7 71 aa11.24□□□□□ -0.61
LMO2-203ENST00000411482 H7BZZ5 65 aa11.24□□□□□ -0.61
LMO2-203ENST00000411482 WFDC13Q8IUB5 93 aa11.24□□□□□ -0.61
LMO2-203ENST00000411482 NDUFC1O43677 76 aa11.23□□□□□ -0.61
LMO2-203ENST00000411482 SPINK6Q6UWN8 80 aa11.23□□□□□ -0.61
LMO2-203ENST00000411482 C5orf47Q569G3 176 aa11.21□□□□□ -0.61
LMO2-203ENST00000411482 SNURFQ9Y675 71 aa11.21□□□□□ -0.61
LMO2-203ENST00000411482 A0A1B0GVX0 72 aa11.19□□□□□ -0.62
LMO2-203ENST00000411482 PKHD1L1Q86WI1 4243 aa11.18□□□□□ -0.62
LMO2-203ENST00000411482 C8orf17Q9NRJ1 99 aa11.17□□□□□ -0.62
LMO2-203ENST00000411482 ZCCHC13Q8WW36 166 aaKnown RBP11.16□□□□□ -0.62
LMO2-203ENST00000411482 hDV103S1A0JD37 113 aa11.15□□□□□ -0.62
LMO2-203ENST00000411482 RPS28P62857 69 aaKnown RBP11.13□□□□□ -0.63
LMO2-203ENST00000411482 MYCBP2O75592 4640 aa11.12□□□□□ -0.63
LMO2-203ENST00000411482 IGHV6-1A0A0B4J1U7 121 aa11.09□□□□□ -0.63
LMO2-203ENST00000411482 H3BPC8 53 aa11.08□□□□□ -0.64
LMO2-203ENST00000411482 LRP1Q07954 4544 aaKnown RBP11.07□□□□□ -0.64
LMO2-203ENST00000411482 FAM236DA0A1B0GTK5 79 aa11.07□□□□□ -0.64
LMO2-203ENST00000411482 FAM236CP0DP71 79 aa11.07□□□□□ -0.64
LMO2-203ENST00000411482 C1orf195Q5TG92 126 aa11.07□□□□□ -0.64
LMO2-203ENST00000411482 TP53AIP1Q9HCN2 124 aa11.07□□□□□ -0.64
LMO2-203ENST00000411482 TYMSOSQ8TAI1 123 aa11.06□□□□□ -0.64
LMO2-203ENST00000411482 MP68P56378 58 aa11.05□□□□□ -0.64
LMO2-203ENST00000411482 LIMD2Q9BT23 127 aa11.05□□□□□ -0.64
LMO2-203ENST00000411482 ATP5EP56381 51 aaPredicted RBP11.04□□□□□ -0.64
LMO2-203ENST00000411482 NOTCH2NLQ7Z3S9 236 aa11.04□□□□□ -0.64
LMO2-203ENST00000411482 C8orf87E5RJ46 101 aa11.04□□□□□ -0.64
LMO2-203ENST00000411482 SPINK1P00995 79 aa11.04□□□□□ -0.64
LMO2-203ENST00000411482 MRPL34Q9BQ48 92 aaKnown RBP11.04□□□□□ -0.64
LMO2-203ENST00000411482 RPS29P62273 56 aaKnown RBP11.03□□□□□ -0.64
LMO2-203ENST00000411482 FAT3Q8TDW7 4589 aa11.01□□□□□ -0.65
LMO2-203ENST00000411482 C4orf48Q5BLP8 95 aa11□□□□□ -0.65
LMO2-203ENST00000411482 H0Y9P7 68 aa10.99□□□□□ -0.65
LMO2-203ENST00000411482 SPAG11AQ6PDA7 123 aa10.99□□□□□ -0.65
LMO2-203ENST00000411482 PRR26Q8N8Z3 221 aa10.99□□□□□ -0.65
LMO2-203ENST00000411482 TRAV22A0A0B4J277 110 aa10.98□□□□□ -0.65
LMO2-203ENST00000411482 LINC00208Q96KT6 92 aa10.96□□□□□ -0.65
LMO2-203ENST00000411482 DMBT1Q9UGM3 2413 aaPredicted RBP10.95□□□□□ -0.66
LMO2-203ENST00000411482 OXTP01178 125 aa10.94□□□□□ -0.66
LMO2-203ENST00000411482 LINC00304Q8N9R0 145 aa10.94□□□□□ -0.66
LMO2-203ENST00000411482 SERP1Q9Y6X1 66 aa10.94□□□□□ -0.66
LMO2-203ENST00000411482 LINC00313P59037 77 aa10.92□□□□□ -0.66
LMO2-203ENST00000411482 MT1HL1P0DM35 61 aa10.9□□□□□ -0.66
LMO2-203ENST00000411482 C1orf64Q8NEQ6 169 aa10.9□□□□□ -0.66
LMO2-203ENST00000411482 Q8N9P0 234 aaPredicted RBP10.89□□□□□ -0.67
LMO2-203ENST00000411482 TNXBP22105 4242 aa10.88□□□□□ -0.67
LMO2-203ENST00000411482 NDUFS5O43920 106 aa10.87□□□□□ -0.67
LMO2-203ENST00000411482 KRTAP13-3Q3SY46 172 aa10.87□□□□□ -0.67
LMO2-203ENST00000411482 KRTAP16-1A8MUX0 517 aa10.86□□□□□ -0.67
LMO2-203ENST00000411482 CYP4F30PQ9H0H9 118 aa10.85□□□□□ -0.67
LMO2-203ENST00000411482 J3QL48 77 aa10.84□□□□□ -0.67
LMO2-203ENST00000411482 KRTAP10-8P60410 259 aa10.84□□□□□ -0.67
LMO2-203ENST00000411482 SPANXA2-OT1Q8N9U9 137 aa10.84□□□□□ -0.67
LMO2-203ENST00000411482 HERC1Q15751 4861 aa10.8□□□□□ -0.68
LMO2-203ENST00000411482 Q5W150 140 aa10.79□□□□□ -0.68
LMO2-203ENST00000411482 LOC101927531A0A1B0GV80 90 aa10.76□□□□□ -0.69
LMO2-203ENST00000411482 IGLV7-46A0A075B6I9 117 aa10.73□□□□□ -0.69
LMO2-203ENST00000411482 SMIM26A0A096LP01 95 aa10.7□□□□□ -0.7
LMO2-203ENST00000411482 PRR4Q16378 134 aa10.64□□□□□ -0.71
LMO2-203ENST00000411482 PCOTHQ58A44 107 aa10.64□□□□□ -0.71
LMO2-203ENST00000411482 IGKV2-30P06310 120 aa10.61□□□□□ -0.71
LMO2-203ENST00000411482 FP248Q71RG6 208 aaPredicted RBP10.61□□□□□ -0.71
LMO2-203ENST00000411482 C20orf166-AS1Q96NR2 134 aa10.56□□□□□ -0.72
LMO2-203ENST00000411482 A8MUU9 505 aa10.55□□□□□ -0.72
LMO2-203ENST00000411482 RETNLBQ9BQ08 111 aa10.52□□□□□ -0.73
LMO2-203ENST00000411482 HMCN2Q8NDA2 5059 aa10.49□□□□□ -0.73
LMO2-203ENST00000411482 HRES1P13985 223 aa10.48□□□□□ -0.73
LMO2-203ENST00000411482 C4orf26Q17RF5 130 aa10.47□□□□□ -0.73
LMO2-203ENST00000411482 COA5Q86WW8 74 aa10.47□□□□□ -0.73
LMO2-203ENST00000411482 C9orf92A6NGG3 77 aa10.45□□□□□ -0.74
LMO2-203ENST00000411482 Q1T7F1 81 aa10.45□□□□□ -0.74
LMO2-203ENST00000411482 DMAC1Q96GE9 116 aa10.43□□□□□ -0.74
LMO2-203ENST00000411482 IGKV2D-30A0A075B6S6 120 aa10.4□□□□□ -0.74
LMO2-203ENST00000411482 Q75L30 129 aa10.4□□□□□ -0.74
LMO2-203ENST00000411482 C7orf65Q6ZTY9 151 aa10.38□□□□□ -0.75
LMO2-203ENST00000411482 ACYP2P14621 99 aa10.37□□□□□ -0.75
LMO2-203ENST00000411482 MPLKIPQ8TAP9 179 aa10.37□□□□□ -0.75
LMO2-203ENST00000411482 V9GYY9 64 aa10.35□□□□□ -0.75
LMO2-203ENST00000411482 LRP2P98164 4655 aa10.28□□□□□ -0.76
LMO2-203ENST00000411482 LPAP08519 4548 aa10.28□□□□□ -0.76
LMO2-203ENST00000411482 LCE2DQ5TA82 110 aaPredicted RBP10.27□□□□□ -0.77
LMO2-203ENST00000411482 A8MUN3 132 aa10.23□□□□□ -0.77
LMO2-203ENST00000411482 RPL37P61927 97 aaKnown RBP10.22□□□□□ -0.77
LMO2-203ENST00000411482 SPINK7P58062 85 aa10.21□□□□□ -0.78
LMO2-203ENST00000411482 XP32Q5T750 250 aa10.2□□□□□ -0.78
LMO2-203ENST00000411482 LINC01558Q9Y6Z2 57 aa10.2□□□□□ -0.78
LMO2-203ENST00000411482 UBR4Q5T4S7 5183 aa10.16□□□□□ -0.78
LMO2-203ENST00000411482 ATP11AUNQ6ZP68 121 aa10.16□□□□□ -0.78
LMO2-203ENST00000411482 CHKB-CPT1BH3BT56 60 aa10.13□□□□□ -0.79
LMO2-203ENST00000411482 PSPHP1O15172 72 aa10.13□□□□□ -0.79
LMO2-203ENST00000411482 Q5VV11 94 aa10.12□□□□□ -0.79
LMO2-203ENST00000411482 TPRXLQ17RH7 258 aa10.1□□□□□ -0.79
LMO2-203ENST00000411482 KRTAP3-1Q9BYR8 98 aa10.09□□□□□ -0.79
LMO2-203ENST00000411482 PRR15LQ9BU68 103 aa10.08□□□□□ -0.8
LMO2-203ENST00000411482 COX6B2Q6YFQ2 88 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms