RNA–Protein interactions for RNA: ENST00000404272.2

MRPL35P1-201, Transcript of mitochondrial ribosomal protein L35 pseudogene 1, humanhuman

BASIC

Gene MRPL35P1, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35P1-201ENST00000404272 LINC01600Q96MT4 127 aa0.28□□□□□ -2.36
MRPL35P1-201ENST00000404272 PRO0255Q9UI72 69 aa0.28□□□□□ -2.36
MRPL35P1-201ENST00000404272 PLCE1Q9P212 2302 aa0.28□□□□□ -2.36
MRPL35P1-201ENST00000404272 FAT4Q6V0I7 4981 aa0.28□□□□□ -2.36
MRPL35P1-201ENST00000404272 DMBT1Q9UGM3 2413 aaPredicted RBP0.28□□□□□ -2.36
MRPL35P1-201ENST00000404272 MYCBP2O75592 4640 aa0.28□□□□□ -2.36
MRPL35P1-201ENST00000404272 PLIN4Q96Q06 1357 aa0.28□□□□□ -2.36
MRPL35P1-201ENST00000404272 DYNC1H1Q14204 4646 aaKnown RBP0.27□□□□□ -2.37
MRPL35P1-201ENST00000404272 FAT2Q9NYQ8 4349 aa0.27□□□□□ -2.37
MRPL35P1-201ENST00000404272 DOCK11Q5JSL3 2073 aa0.27□□□□□ -2.37
MRPL35P1-201ENST00000404272 D6R8Y8 96 aa0.27□□□□□ -2.37
MRPL35P1-201ENST00000404272 H0Y9P7 68 aa0.27□□□□□ -2.37
MRPL35P1-201ENST00000404272 I3L2K1 104 aa0.27□□□□□ -2.37
MRPL35P1-201ENST00000404272 PLECQ15149 4684 aaKnown RBP0.27□□□□□ -2.37
MRPL35P1-201ENST00000404272 DEFB133Q30KQ1 61 aa0.27□□□□□ -2.37
MRPL35P1-201ENST00000404272 ETDBQ3ZM63 59 aa0.27□□□□□ -2.37
MRPL35P1-201ENST00000404272 Q5BKY6 102 aa0.27□□□□□ -2.37
MRPL35P1-201ENST00000404272 DEFB121Q5J5C9 76 aa0.27□□□□□ -2.37
MRPL35P1-201ENST00000404272 MUSTN1Q8IVN3 82 aa0.27□□□□□ -2.37
MRPL35P1-201ENST00000404272 C20orf78Q9BR46 151 aa0.27□□□□□ -2.37
MRPL35P1-201ENST00000404272 DNAH2Q9P225 4427 aa0.27□□□□□ -2.37
MRPL35P1-201ENST00000404272 TNCP24821 2201 aa0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 FSIP2Q5CZC0 6907 aa0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 VPS13BQ7Z7G8 4022 aa0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 DNAH6Q9C0G6 4158 aa0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 HUWE1Q7Z6Z7 4374 aaKnown RBP0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 LPAP08519 4548 aa0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 APOBP04114 4563 aaKnown RBP0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 A0A087WVE0 104 aa0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 K7EP34 96 aa0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 LEPROTL1O95214 131 aa0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 SPINK1P00995 79 aa0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 STATHP02808 62 aa0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 SMR3BP02814 79 aaPredicted RBP0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 KRTAP2-3P0C7H8 128 aa0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 GNGT1P63211 74 aa0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 PEA15Q15121 130 aa0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 C9orf62Q8N4C0 152 aa0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 S100A16Q96FQ6 103 aaKnown RBP0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 USMG5Q96IX5 58 aa0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 KRTAP2-4Q9BYR9 128 aa0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 KRTAP2-1Q9BYU5 128 aa0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 PSENENQ9NZ42 101 aa0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 HIGD1BQ9P298 99 aa0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 U3KQA8 63 aa0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 FAT3Q8TDW7 4589 aa0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 FAT1Q14517 4588 aa0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 HMCN2Q8NDA2 5059 aa0.26□□□□□ -2.37
MRPL35P1-201ENST00000404272 VPS13DQ5THJ4 4388 aa0.25□□□□□ -2.37
MRPL35P1-201ENST00000404272 DNAH17Q9UFH2 4485 aa0.25□□□□□ -2.37
MRPL35P1-201ENST00000404272 PKHD1L1Q86WI1 4243 aa0.25□□□□□ -2.37
MRPL35P1-201ENST00000404272 LCE6AA0A183 80 aa0.25□□□□□ -2.37
MRPL35P1-201ENST00000404272 A0A1B0GU69 56 aa0.25□□□□□ -2.37
MRPL35P1-201ENST00000404272 LINC00959A0A1B0GUT2 108 aa0.25□□□□□ -2.37
MRPL35P1-201ENST00000404272 F8WEM9 126 aa0.25□□□□□ -2.37
MRPL35P1-201ENST00000404272 CYB5AP00167 134 aa0.25□□□□□ -2.37
MRPL35P1-201ENST00000404272 HMGN2P05204 90 aaKnown RBP0.25□□□□□ -2.37
MRPL35P1-201ENST00000404272 ACYP1P07311 99 aa0.25□□□□□ -2.37
MRPL35P1-201ENST00000404272 SNRPFP62306 86 aaKnown RBP0.25□□□□□ -2.37
MRPL35P1-201ENST00000404272 WFDC2Q14508 124 aa0.25□□□□□ -2.37
MRPL35P1-201ENST00000404272 LELP1Q5T871 98 aa0.25□□□□□ -2.37
MRPL35P1-201ENST00000404272 Q5VSD8 79 aa0.25□□□□□ -2.37
MRPL35P1-201ENST00000404272 C6orf201Q7Z4U5 140 aa0.25□□□□□ -2.37
MRPL35P1-201ENST00000404272 DEFB107AQ8IZN7 70 aa0.25□□□□□ -2.37
MRPL35P1-201ENST00000404272 LRP1Q07954 4544 aaKnown RBP0.25□□□□□ -2.37
MRPL35P1-201ENST00000404272 LRP2P98164 4655 aa0.25□□□□□ -2.37
MRPL35P1-201ENST00000404272 LRP1BQ9NZR2 4599 aa0.25□□□□□ -2.37
MRPL35P1-201ENST00000404272 DNAH5Q8TE73 4624 aa0.24□□□□□ -2.37
MRPL35P1-201ENST00000404272 LYNX1G3V0Z9 82 aa0.24□□□□□ -2.37
MRPL35P1-201ENST00000404272 CFDP00746 253 aaPredicted RBP0.24□□□□□ -2.37
MRPL35P1-201ENST00000404272 COX8AP10176 69 aa0.24□□□□□ -2.37
MRPL35P1-201ENST00000404272 DEFB110Q30KQ9 67 aa0.24□□□□□ -2.37
MRPL35P1-201ENST00000404272 KRTAP20-1Q3LI63 56 aa0.24□□□□□ -2.37
MRPL35P1-201ENST00000404272 LINC00643Q86TS7 51 aa0.24□□□□□ -2.37
MRPL35P1-201ENST00000404272 Q9Y3F1 56 aa0.24□□□□□ -2.37
MRPL35P1-201ENST00000404272 DNAH11Q96DT5 4516 aa0.24□□□□□ -2.37
MRPL35P1-201ENST00000404272 SSPOA2VEC9 5147 aa0.24□□□□□ -2.37
MRPL35P1-201ENST00000404272 KMT2DO14686 5537 aa0.24□□□□□ -2.37
MRPL35P1-201ENST00000404272 MACF1Q9UPN3 7388 aaKnown RBP0.24□□□□□ -2.37
MRPL35P1-201ENST00000404272 KANTRA0A1W2PQU2 76 aa0.23□□□□□ -2.37
MRPL35P1-201ENST00000404272 IGLC3P0DOY3 106 aa0.23□□□□□ -2.37
MRPL35P1-201ENST00000404272 HMGA1P17096 107 aaKnown RBP0.23□□□□□ -2.37
MRPL35P1-201ENST00000404272 TFF3Q07654 80 aa0.23□□□□□ -2.37
MRPL35P1-201ENST00000404272 PLGLAQ15195 96 aa0.23□□□□□ -2.37
MRPL35P1-201ENST00000404272 NMSQ5H8A3 153 aa0.23□□□□□ -2.37
MRPL35P1-201ENST00000404272 S100A13Q99584 98 aa0.23□□□□□ -2.37
MRPL35P1-201ENST00000404272 CRIPTQ9P021 101 aa0.23□□□□□ -2.37
MRPL35P1-201ENST00000404272 UBE2D4Q9Y2X8 147 aa0.23□□□□□ -2.37
MRPL35P1-201ENST00000404272 TNXBP22105 4242 aa0.23□□□□□ -2.37
MRPL35P1-201ENST00000404272 SYNE2Q8WXH0 6885 aaKnown RBP0.23□□□□□ -2.37
MRPL35P1-201ENST00000404272 FXYD6-FXYD2A0A087WZ82 144 aa0.22□□□□□ -2.37
MRPL35P1-201ENST00000404272 MYMXA0A1B0GTQ4 84 aa0.22□□□□□ -2.37
MRPL35P1-201ENST00000404272 A0A1B0GUT8 65 aa0.22□□□□□ -2.37
MRPL35P1-201ENST00000404272 K7EQZ3 153 aa0.22□□□□□ -2.37
MRPL35P1-201ENST00000404272 DEFB4AO15263 64 aa0.22□□□□□ -2.37
MRPL35P1-201ENST00000404272 IGLC2P0DOY2 106 aa0.22□□□□□ -2.37
MRPL35P1-201ENST00000404272 KRTAP21-1Q3LI58 79 aa0.22□□□□□ -2.37
MRPL35P1-201ENST00000404272 USH2AO75445 5202 aa0.22□□□□□ -2.37
MRPL35P1-201ENST00000404272 DNAH8Q96JB1 4490 aa0.21□□□□□ -2.38
MRPL35P1-201ENST00000404272 SPTY2D1-AS1A0A0U1RR47 76 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms