RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 RBM12B-AS1Q9P1G2 102 aa9.28□□□□□ -0.92
CDC42-203ENST00000400259 C1orf64Q8NEQ6 169 aa9.27□□□□□ -0.93
CDC42-203ENST00000400259 MP68P56378 58 aa9.26□□□□□ -0.93
CDC42-203ENST00000400259 A0A1B0GVX0 72 aa9.26□□□□□ -0.93
CDC42-203ENST00000400259 PSPHP1O15172 72 aa9.25□□□□□ -0.93
CDC42-203ENST00000400259 C8orf17Q9NRJ1 99 aa9.25□□□□□ -0.93
CDC42-203ENST00000400259 H3BPC8 53 aa9.25□□□□□ -0.93
CDC42-203ENST00000400259 NDUFS5O43920 106 aa9.23□□□□□ -0.93
CDC42-203ENST00000400259 CYP4F30PQ9H0H9 118 aa9.23□□□□□ -0.93
CDC42-203ENST00000400259 CDK2AP2O75956 126 aa9.22□□□□□ -0.93
CDC42-203ENST00000400259 H0Y9P7 68 aa9.21□□□□□ -0.93
CDC42-203ENST00000400259 PRR4Q16378 134 aa9.21□□□□□ -0.94
CDC42-203ENST00000400259 C4orf48Q5BLP8 95 aa9.21□□□□□ -0.94
CDC42-203ENST00000400259 A0A087X002 238 aa9.2□□□□□ -0.94
CDC42-203ENST00000400259 IGHV6-1A0A0B4J1U7 121 aa9.2□□□□□ -0.94
CDC42-203ENST00000400259 LINC00208Q96KT6 92 aa9.2□□□□□ -0.94
CDC42-203ENST00000400259 KRTAP13-2Q52LG2 175 aa9.19□□□□□ -0.94
CDC42-203ENST00000400259 TP53AIP1Q9HCN2 124 aa9.19□□□□□ -0.94
CDC42-203ENST00000400259 LRP1BQ9NZR2 4599 aa9.18□□□□□ -0.94
CDC42-203ENST00000400259 A8MUN3 132 aa9.17□□□□□ -0.94
CDC42-203ENST00000400259 KRTAP1-4P0C5Y4 121 aa9.17□□□□□ -0.94
CDC42-203ENST00000400259 Q5VV11 94 aa9.16□□□□□ -0.94
CDC42-203ENST00000400259 MRPL34Q9BQ48 92 aaKnown RBP9.15□□□□□ -0.95
CDC42-203ENST00000400259 ATP11AUNQ6ZP68 121 aa9.14□□□□□ -0.95
CDC42-203ENST00000400259 NOTCH2NLQ7Z3S9 236 aa9.13□□□□□ -0.95
CDC42-203ENST00000400259 SPINK6Q6UWN8 80 aa9.12□□□□□ -0.95
CDC42-203ENST00000400259 LIMD2Q9BT23 127 aa9.11□□□□□ -0.95
CDC42-203ENST00000400259 SACSQ9NZJ4 4579 aa9.11□□□□□ -0.95
CDC42-203ENST00000400259 SPANXA2-OT1Q8N9U9 137 aa9.11□□□□□ -0.95
CDC42-203ENST00000400259 C8orf87E5RJ46 101 aa9.09□□□□□ -0.95
CDC42-203ENST00000400259 A6NN06 94 aa9.08□□□□□ -0.96
CDC42-203ENST00000400259 A8MU10 97 aa9.08□□□□□ -0.96
CDC42-203ENST00000400259 CHKB-CPT1BH3BT56 60 aa9.08□□□□□ -0.96
CDC42-203ENST00000400259 A0A1B0GVY2 172 aa9.07□□□□□ -0.96
CDC42-203ENST00000400259 VPS13BQ7Z7G8 4022 aa9.07□□□□□ -0.96
CDC42-203ENST00000400259 C7orf65Q6ZTY9 151 aa9.05□□□□□ -0.96
CDC42-203ENST00000400259 PLA2G1BP04054 148 aaKnown RBP9.04□□□□□ -0.96
CDC42-203ENST00000400259 SPTSSBQ8NFR3 76 aa9.03□□□□□ -0.96
CDC42-203ENST00000400259 Q8N9P0 234 aaPredicted RBP9.03□□□□□ -0.96
CDC42-203ENST00000400259 Q75L30 129 aa9.02□□□□□ -0.96
CDC42-203ENST00000400259 PKHD1P08F94 4074 aa9.02□□□□□ -0.97
CDC42-203ENST00000400259 LCA10Q71F78 164 aa9□□□□□ -0.97
CDC42-203ENST00000400259 TYMSOSQ8TAI1 123 aa9□□□□□ -0.97
CDC42-203ENST00000400259 KRTAP13-3Q3SY46 172 aa9□□□□□ -0.97
CDC42-203ENST00000400259 LINC00313P59037 77 aa8.99□□□□□ -0.97
CDC42-203ENST00000400259 PRR15LQ9BU68 103 aa8.99□□□□□ -0.97
CDC42-203ENST00000400259 SPINK1P00995 79 aa8.98□□□□□ -0.97
CDC42-203ENST00000400259 PCOTHQ58A44 107 aa8.98□□□□□ -0.97
CDC42-203ENST00000400259 IGLV7-46A0A075B6I9 117 aa8.98□□□□□ -0.97
CDC42-203ENST00000400259 CDC42SE1Q9NRR8 79 aa8.97□□□□□ -0.97
CDC42-203ENST00000400259 LOC101927531A0A1B0GV80 90 aa8.97□□□□□ -0.97
CDC42-203ENST00000400259 Q5W150 140 aa8.95□□□□□ -0.98
CDC42-203ENST00000400259 A6NED7 52 aa8.94□□□□□ -0.98
CDC42-203ENST00000400259 RPS29P62273 56 aaKnown RBP8.94□□□□□ -0.98
CDC42-203ENST00000400259 KRTAP10-4P60372 401 aaPredicted RBP8.93□□□□□ -0.98
CDC42-203ENST00000400259 DYNC1H1Q14204 4646 aaKnown RBP8.93□□□□□ -0.98
CDC42-203ENST00000400259 KRTAP16-1A8MUX0 517 aa8.93□□□□□ -0.98
CDC42-203ENST00000400259 SMR3BP02814 79 aaPredicted RBP8.92□□□□□ -0.98
CDC42-203ENST00000400259 PRR26Q8N8Z3 221 aa8.91□□□□□ -0.98
CDC42-203ENST00000400259 SPAG11AQ6PDA7 123 aa8.9□□□□□ -0.98
CDC42-203ENST00000400259 LINC00304Q8N9R0 145 aa8.9□□□□□ -0.98
CDC42-203ENST00000400259 FAM229AH3BQW9 127 aa8.89□□□□□ -0.99
CDC42-203ENST00000400259 RYR2Q92736 4967 aa8.88□□□□□ -0.99
CDC42-203ENST00000400259 H3BS24 57 aa8.86□□□□□ -0.99
CDC42-203ENST00000400259 APOBP04114 4563 aaKnown RBP8.86□□□□□ -0.99
CDC42-203ENST00000400259 COA5Q86WW8 74 aa8.84□□□□□ -0.99
CDC42-203ENST00000400259 RETNLBQ9BQ08 111 aa8.79□□□□□ -1
CDC42-203ENST00000400259 IGKV2-30P06310 120 aa8.79□□□□□ -1
CDC42-203ENST00000400259 LINC01558Q9Y6Z2 57 aa8.79□□□□□ -1
CDC42-203ENST00000400259 FAT1Q14517 4588 aa8.77□□□□□ -1.01
CDC42-203ENST00000400259 HRES1P13985 223 aa8.76□□□□□ -1.01
CDC42-203ENST00000400259 PKHD1L1Q86WI1 4243 aa8.76□□□□□ -1.01
CDC42-203ENST00000400259 KMT2CQ8NEZ4 4911 aaKnown RBP8.74□□□□□ -1.01
CDC42-203ENST00000400259 LINC01554Q52M75 96 aa8.72□□□□□ -1.01
CDC42-203ENST00000400259 DMAC1Q96GE9 116 aa8.69□□□□□ -1.02
CDC42-203ENST00000400259 ACYP2P14621 99 aa8.67□□□□□ -1.02
CDC42-203ENST00000400259 SPINK7P58062 85 aa8.65□□□□□ -1.03
CDC42-203ENST00000400259 IGKV2D-30A0A075B6S6 120 aa8.63□□□□□ -1.03
CDC42-203ENST00000400259 C20orf166-AS1Q96NR2 134 aa8.63□□□□□ -1.03
CDC42-203ENST00000400259 A8MUU9 505 aa8.62□□□□□ -1.03
CDC42-203ENST00000400259 PRAC1Q96KF2 57 aa8.61□□□□□ -1.03
CDC42-203ENST00000400259 FLG2Q5D862 2391 aaPredicted RBP8.6□□□□□ -1.03
CDC42-203ENST00000400259 Q5VSD8 79 aa8.59□□□□□ -1.03
CDC42-203ENST00000400259 C9orf92A6NGG3 77 aa8.57□□□□□ -1.04
CDC42-203ENST00000400259 KRTAP10-8P60410 259 aa8.57□□□□□ -1.04
CDC42-203ENST00000400259 Q8N1X5 172 aa8.55□□□□□ -1.04
CDC42-203ENST00000400259 HSPG2P98160 4391 aa8.54□□□□□ -1.04
CDC42-203ENST00000400259 ADM2Q7Z4H4 148 aa8.5□□□□□ -1.05
CDC42-203ENST00000400259 RYR3Q15413 4870 aa8.49□□□□□ -1.05
CDC42-203ENST00000400259 TNXBP22105 4242 aa8.49□□□□□ -1.05
CDC42-203ENST00000400259 RYR1P21817 5038 aa8.46□□□□□ -1.06
CDC42-203ENST00000400259 KRTAP17-1Q9BYP8 105 aa8.46□□□□□ -1.06
CDC42-203ENST00000400259 LRP1Q07954 4544 aaKnown RBP8.45□□□□□ -1.06
CDC42-203ENST00000400259 FAT3Q8TDW7 4589 aa8.41□□□□□ -1.06
CDC42-203ENST00000400259 SPATA8Q6RVD6 105 aa8.38□□□□□ -1.07
CDC42-203ENST00000400259 MT1HL1P0DM35 61 aa8.36□□□□□ -1.07
CDC42-203ENST00000400259 A0A1B0GU69 56 aa8.32□□□□□ -1.08
CDC42-203ENST00000400259 CSAG1Q6PB30 78 aa8.32□□□□□ -1.08
CDC42-203ENST00000400259 KIAA1109Q2LD37 5005 aa8.31□□□□□ -1.08
CDC42-203ENST00000400259 KRTAP3-1Q9BYR8 98 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms