RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 DNAH1Q9P2D7 4330 aa3.75□□□□□ -1.81
TRAPPC13-202ENST00000399438 GVQW2A0A096LPI5 108 aaPredicted RBP3.74□□□□□ -1.81
TRAPPC13-202ENST00000399438 C9orf163Q8N9P6 203 aa3.74□□□□□ -1.81
TRAPPC13-202ENST00000399438 ETDCA0A1B0GVM5 59 aa3.74□□□□□ -1.81
TRAPPC13-202ENST00000399438 TMEM254Q8TBM7 123 aa3.74□□□□□ -1.81
TRAPPC13-202ENST00000399438 FBN3Q75N90 2809 aa3.74□□□□□ -1.81
TRAPPC13-202ENST00000399438 KMT2AQ03164 3969 aa3.74□□□□□ -1.81
TRAPPC13-202ENST00000399438 CSAG1Q6PB30 78 aa3.74□□□□□ -1.81
TRAPPC13-202ENST00000399438 KRTAP11-1Q8IUC1 163 aa3.74□□□□□ -1.81
TRAPPC13-202ENST00000399438 DYNC2H1Q8NCM8 4307 aaKnown RBP3.73□□□□□ -1.81
TRAPPC13-202ENST00000399438 LOC101927531A0A1B0GV80 90 aa3.72□□□□□ -1.81
TRAPPC13-202ENST00000399438 KRTAP25-1Q3LHN0 102 aa3.72□□□□□ -1.81
TRAPPC13-202ENST00000399438 FRAS1Q86XX4 4008 aa3.72□□□□□ -1.81
TRAPPC13-202ENST00000399438 TRBV7-4A0A0J9YYF1 115 aa3.71□□□□□ -1.82
TRAPPC13-202ENST00000399438 NREPQ16612 68 aa3.71□□□□□ -1.82
TRAPPC13-202ENST00000399438 H3BNG1 76 aa3.7□□□□□ -1.82
TRAPPC13-202ENST00000399438 LOC110117498A0A087WWA1 95 aa3.7□□□□□ -1.82
TRAPPC13-202ENST00000399438 Q6ZRX8 168 aa3.7□□□□□ -1.82
TRAPPC13-202ENST00000399438 RPL37AP61513 92 aaKnown RBP3.69□□□□□ -1.82
TRAPPC13-202ENST00000399438 C1orf137Q5JT78 98 aa3.69□□□□□ -1.82
TRAPPC13-202ENST00000399438 KCNQ1DNQ9H478 68 aa3.69□□□□□ -1.82
TRAPPC13-202ENST00000399438 ANAPC11Q9NYG5 84 aa3.69□□□□□ -1.82
TRAPPC13-202ENST00000399438 ZNF861PO60384 105 aa3.69□□□□□ -1.82
TRAPPC13-202ENST00000399438 WFDC13Q8IUB5 93 aa3.67□□□□□ -1.82
TRAPPC13-202ENST00000399438 DNAH2Q9P225 4427 aa3.67□□□□□ -1.82
TRAPPC13-202ENST00000399438 LRCOL1A6NCL2 159 aa3.67□□□□□ -1.82
TRAPPC13-202ENST00000399438 K7EQZ3 153 aa3.66□□□□□ -1.82
TRAPPC13-202ENST00000399438 IGKV4-1P06312 121 aa3.66□□□□□ -1.82
TRAPPC13-202ENST00000399438 VPS13DQ5THJ4 4388 aa3.66□□□□□ -1.82
TRAPPC13-202ENST00000399438 NUPR2A6NF83 97 aa3.65□□□□□ -1.83
TRAPPC13-202ENST00000399438 CNBPP62633 177 aaKnown RBP3.65□□□□□ -1.83
TRAPPC13-202ENST00000399438 ATP5EP2Q5VTU8 51 aa3.65□□□□□ -1.83
TRAPPC13-202ENST00000399438 APLNQ9ULZ1 77 aa3.65□□□□□ -1.83
TRAPPC13-202ENST00000399438 DNAH6Q9C0G6 4158 aa3.65□□□□□ -1.83
TRAPPC13-202ENST00000399438 DNAH11Q96DT5 4516 aa3.64□□□□□ -1.83
TRAPPC13-202ENST00000399438 IGFL1Q6UW32 110 aa3.64□□□□□ -1.83
TRAPPC13-202ENST00000399438 PDE6GP18545 87 aa3.63□□□□□ -1.83
TRAPPC13-202ENST00000399438 DNAH17Q9UFH2 4485 aa3.62□□□□□ -1.83
TRAPPC13-202ENST00000399438 ALMS1Q8TCU4 4167 aa3.62□□□□□ -1.83
TRAPPC13-202ENST00000399438 SPRR1AP35321 89 aa3.62□□□□□ -1.83
TRAPPC13-202ENST00000399438 DNAH8Q96JB1 4490 aa3.62□□□□□ -1.83
TRAPPC13-202ENST00000399438 DSCR10P59022 87 aa3.62□□□□□ -1.83
TRAPPC13-202ENST00000399438 IGLV5-48A0A075B6I7 105 aa3.61□□□□□ -1.83
TRAPPC13-202ENST00000399438 NBDYA0A0U1RRE5 68 aa3.61□□□□□ -1.83
TRAPPC13-202ENST00000399438 KRTAP15-1Q3LI76 137 aa3.61□□□□□ -1.83
TRAPPC13-202ENST00000399438 HYDINQ4G0P3 5121 aa3.61□□□□□ -1.83
TRAPPC13-202ENST00000399438 HECTD4Q9Y4D8 3996 aa3.61□□□□□ -1.83
TRAPPC13-202ENST00000399438 LY6G6CO95867 125 aa3.6□□□□□ -1.83
TRAPPC13-202ENST00000399438 DMAC1Q96GE9 116 aa3.6□□□□□ -1.83
TRAPPC13-202ENST00000399438 PRR15LQ9BU68 103 aa3.59□□□□□ -1.83
TRAPPC13-202ENST00000399438 R4GN34 69 aa3.58□□□□□ -1.84
TRAPPC13-202ENST00000399438 SPINK6Q6UWN8 80 aa3.57□□□□□ -1.84
TRAPPC13-202ENST00000399438 LRP1BQ9NZR2 4599 aa3.57□□□□□ -1.84
TRAPPC13-202ENST00000399438 Q6ZRN7 208 aaPredicted RBP3.57□□□□□ -1.84
TRAPPC13-202ENST00000399438 PRO2289Q9P1D8 64 aa3.57□□□□□ -1.84
TRAPPC13-202ENST00000399438 SACSQ9NZJ4 4579 aa3.56□□□□□ -1.84
TRAPPC13-202ENST00000399438 SPAG11AQ6PDA7 123 aa3.56□□□□□ -1.84
TRAPPC13-202ENST00000399438 A0A087WTM6 91 aa3.55□□□□□ -1.84
TRAPPC13-202ENST00000399438 PSORS1C2Q9UIG4 136 aa3.55□□□□□ -1.84
TRAPPC13-202ENST00000399438 DNAH5Q8TE73 4624 aa3.55□□□□□ -1.84
TRAPPC13-202ENST00000399438 IGKV2-30P06310 120 aa3.55□□□□□ -1.84
TRAPPC13-202ENST00000399438 LINC00208Q96KT6 92 aa3.55□□□□□ -1.84
TRAPPC13-202ENST00000399438 SPRR4Q96PI1 79 aa3.55□□□□□ -1.84
TRAPPC13-202ENST00000399438 PLAC8Q9NZF1 115 aa3.55□□□□□ -1.84
TRAPPC13-202ENST00000399438 PCOTHQ58A44 107 aa3.53□□□□□ -1.84
TRAPPC13-202ENST00000399438 PKHD1P08F94 4074 aa3.53□□□□□ -1.84
TRAPPC13-202ENST00000399438 KRTAP10-2P60368 255 aa3.53□□□□□ -1.84
TRAPPC13-202ENST00000399438 C14orf177Q52M58 125 aa3.52□□□□□ -1.85
TRAPPC13-202ENST00000399438 SPACA4Q8TDM5 124 aa3.52□□□□□ -1.85
TRAPPC13-202ENST00000399438 LCE6AA0A183 80 aa3.52□□□□□ -1.85
TRAPPC13-202ENST00000399438 FAT2Q9NYQ8 4349 aa3.52□□□□□ -1.85
TRAPPC13-202ENST00000399438 FAT1Q14517 4588 aa3.51□□□□□ -1.85
TRAPPC13-202ENST00000399438 LINC01558Q9Y6Z2 57 aa3.51□□□□□ -1.85
TRAPPC13-202ENST00000399438 RYR2Q92736 4967 aa3.5□□□□□ -1.85
TRAPPC13-202ENST00000399438 H0Y9P7 68 aa3.49□□□□□ -1.85
TRAPPC13-202ENST00000399438 LINC00472Q9H8W2 130 aa3.49□□□□□ -1.85
TRAPPC13-202ENST00000399438 KRTAP13-1Q8IUC0 172 aa3.48□□□□□ -1.85
TRAPPC13-202ENST00000399438 VPS13BQ7Z7G8 4022 aa3.48□□□□□ -1.85
TRAPPC13-202ENST00000399438 FLG2Q5D862 2391 aaPredicted RBP3.47□□□□□ -1.85
TRAPPC13-202ENST00000399438 SPINT4Q6UDR6 99 aa3.47□□□□□ -1.85
TRAPPC13-202ENST00000399438 KMT2CQ8NEZ4 4911 aaKnown RBP3.47□□□□□ -1.85
TRAPPC13-202ENST00000399438 MMP24-AS1A0A0U1RRL7 71 aa3.46□□□□□ -1.86
TRAPPC13-202ENST00000399438 TPRXLQ17RH7 258 aa3.46□□□□□ -1.86
TRAPPC13-202ENST00000399438 KRTAP29-1A8MX34 341 aaPredicted RBP3.46□□□□□ -1.86
TRAPPC13-202ENST00000399438 KRTAP10-1P60331 282 aa3.46□□□□□ -1.86
TRAPPC13-202ENST00000399438 Q96NJ1 140 aa3.46□□□□□ -1.86
TRAPPC13-202ENST00000399438 SMR3BP02814 79 aaPredicted RBP3.45□□□□□ -1.86
TRAPPC13-202ENST00000399438 HRES1P13985 223 aa3.45□□□□□ -1.86
TRAPPC13-202ENST00000399438 SPINK7P58062 85 aa3.45□□□□□ -1.86
TRAPPC13-202ENST00000399438 NDUFB1O75438 58 aa3.44□□□□□ -1.86
TRAPPC13-202ENST00000399438 ZCCHC13Q8WW36 166 aaKnown RBP3.44□□□□□ -1.86
TRAPPC13-202ENST00000399438 PKD1P98161 4303 aa3.44□□□□□ -1.86
TRAPPC13-202ENST00000399438 SPRR1BP22528 89 aa3.44□□□□□ -1.86
TRAPPC13-202ENST00000399438 RYR3Q15413 4870 aa3.44□□□□□ -1.86
TRAPPC13-202ENST00000399438 DMBT1Q9UGM3 2413 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC13-202ENST00000399438 DYNC1H1Q14204 4646 aaKnown RBP3.42□□□□□ -1.86
TRAPPC13-202ENST00000399438 MYCBP2O75592 4640 aa3.41□□□□□ -1.86
TRAPPC13-202ENST00000399438 IGKV2D-30A0A075B6S6 120 aa3.41□□□□□ -1.86
TRAPPC13-202ENST00000399438 A0A1B0GVY2 172 aa3.4□□□□□ -1.86
TRAPPC13-202ENST00000399438 UQCR11O14957 56 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms