RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 LRP1BQ9NZR2 4599 aa8.1□□□□□ -1.11
TOP3B-202ENST00000398793 COA5Q86WW8 74 aa8.09□□□□□ -1.11
TOP3B-202ENST00000398793 DNAH5Q8TE73 4624 aa8.09□□□□□ -1.11
TOP3B-202ENST00000398793 H0Y9P7 68 aa8.09□□□□□ -1.11
TOP3B-202ENST00000398793 SPANXA2-OT1Q8N9U9 137 aa8.09□□□□□ -1.11
TOP3B-202ENST00000398793 Q8NBF4 154 aa8.09□□□□□ -1.11
TOP3B-202ENST00000398793 SPACA4Q8TDM5 124 aa8.08□□□□□ -1.12
TOP3B-202ENST00000398793 Q6ZRX8 168 aa8.07□□□□□ -1.12
TOP3B-202ENST00000398793 SPAG11AQ6PDA7 123 aa8.07□□□□□ -1.12
TOP3B-202ENST00000398793 LINC00313P59037 77 aa8.06□□□□□ -1.12
TOP3B-202ENST00000398793 FAT2Q9NYQ8 4349 aa8.06□□□□□ -1.12
TOP3B-202ENST00000398793 A0A1B0GW54 56 aa8.05□□□□□ -1.12
TOP3B-202ENST00000398793 SPINK7P58062 85 aa8.04□□□□□ -1.12
TOP3B-202ENST00000398793 DNAH8Q96JB1 4490 aa8.04□□□□□ -1.12
TOP3B-202ENST00000398793 RYR2Q92736 4967 aa8.03□□□□□ -1.12
TOP3B-202ENST00000398793 RPL37AP61513 92 aaKnown RBP8.01□□□□□ -1.13
TOP3B-202ENST00000398793 SPRR4Q96PI1 79 aa8.01□□□□□ -1.13
TOP3B-202ENST00000398793 ADM2Q7Z4H4 148 aa8□□□□□ -1.13
TOP3B-202ENST00000398793 LINC01554Q52M75 96 aa7.99□□□□□ -1.13
TOP3B-202ENST00000398793 CASC2Q6XLA1 102 aa7.99□□□□□ -1.13
TOP3B-202ENST00000398793 DYNC1H1Q14204 4646 aaKnown RBP7.99□□□□□ -1.13
TOP3B-202ENST00000398793 KIAA1109Q2LD37 5005 aa7.98□□□□□ -1.13
TOP3B-202ENST00000398793 PCOTHQ58A44 107 aa7.98□□□□□ -1.13
TOP3B-202ENST00000398793 LINC01558Q9Y6Z2 57 aa7.98□□□□□ -1.13
TOP3B-202ENST00000398793 KRTAP4-16G5E9R7 235 aaPredicted RBP7.97□□□□□ -1.13
TOP3B-202ENST00000398793 PKD1P98161 4303 aa7.97□□□□□ -1.13
TOP3B-202ENST00000398793 VPS13BQ7Z7G8 4022 aa7.97□□□□□ -1.13
TOP3B-202ENST00000398793 H3BPC8 53 aa7.96□□□□□ -1.13
TOP3B-202ENST00000398793 DHRS4-AS1Q9P1J3 65 aa7.95□□□□□ -1.14
TOP3B-202ENST00000398793 EPPK1P58107 5090 aaKnown RBP7.94□□□□□ -1.14
TOP3B-202ENST00000398793 PRR26Q8N8Z3 221 aa7.94□□□□□ -1.14
TOP3B-202ENST00000398793 PLA2G2DQ9UNK4 145 aa7.94□□□□□ -1.14
TOP3B-202ENST00000398793 IGLV7-46A0A075B6I9 117 aa7.93□□□□□ -1.14
TOP3B-202ENST00000398793 A0A087WSZ3 146 aa7.93□□□□□ -1.14
TOP3B-202ENST00000398793 IGLV5-37A0A075B6J1 123 aa7.92□□□□□ -1.14
TOP3B-202ENST00000398793 KRTAP29-1A8MX34 341 aaPredicted RBP7.92□□□□□ -1.14
TOP3B-202ENST00000398793 SPRR1AP35321 89 aa7.92□□□□□ -1.14
TOP3B-202ENST00000398793 ALMS1Q8TCU4 4167 aa7.92□□□□□ -1.14
TOP3B-202ENST00000398793 SPINK6Q6UWN8 80 aa7.91□□□□□ -1.14
TOP3B-202ENST00000398793 PLAC8Q9NZF1 115 aa7.91□□□□□ -1.14
TOP3B-202ENST00000398793 IGLV7-43P04211 117 aa7.87□□□□□ -1.15
TOP3B-202ENST00000398793 APOBP04114 4563 aaKnown RBP7.87□□□□□ -1.15
TOP3B-202ENST00000398793 IGFL1Q6UW32 110 aa7.87□□□□□ -1.15
TOP3B-202ENST00000398793 ZNF861PO60384 105 aa7.86□□□□□ -1.15
TOP3B-202ENST00000398793 A0A087X002 238 aa7.84□□□□□ -1.15
TOP3B-202ENST00000398793 PLA2G1BP04054 148 aaKnown RBP7.84□□□□□ -1.15
TOP3B-202ENST00000398793 LRP1Q07954 4544 aaKnown RBP7.83□□□□□ -1.16
TOP3B-202ENST00000398793 MYCBP2O75592 4640 aa7.83□□□□□ -1.16
TOP3B-202ENST00000398793 HRES1P13985 223 aa7.82□□□□□ -1.16
TOP3B-202ENST00000398793 H0Y9J4 135 aa7.81□□□□□ -1.16
TOP3B-202ENST00000398793 RETNLBQ9BQ08 111 aa7.79□□□□□ -1.16
TOP3B-202ENST00000398793 A8MWP4 228 aa7.78□□□□□ -1.16
TOP3B-202ENST00000398793 A0A1B0GVY2 172 aa7.78□□□□□ -1.16
TOP3B-202ENST00000398793 Q6ZSA8 131 aa7.76□□□□□ -1.17
TOP3B-202ENST00000398793 KRTAP13-1Q8IUC0 172 aa7.76□□□□□ -1.17
TOP3B-202ENST00000398793 CSAG1Q6PB30 78 aa7.74□□□□□ -1.17
TOP3B-202ENST00000398793 KRTAP17-1Q9BYP8 105 aa7.74□□□□□ -1.17
TOP3B-202ENST00000398793 MMP24-AS1A0A0U1RRL7 71 aa7.73□□□□□ -1.17
TOP3B-202ENST00000398793 RYR1P21817 5038 aa7.7□□□□□ -1.18
TOP3B-202ENST00000398793 FAT3Q8TDW7 4589 aa7.7□□□□□ -1.18
TOP3B-202ENST00000398793 Q5VSD8 79 aa7.69□□□□□ -1.18
TOP3B-202ENST00000398793 LINC00472Q9H8W2 130 aa7.69□□□□□ -1.18
TOP3B-202ENST00000398793 KRTAP13-2Q52LG2 175 aa7.68□□□□□ -1.18
TOP3B-202ENST00000398793 TYMSOSQ8TAI1 123 aa7.68□□□□□ -1.18
TOP3B-202ENST00000398793 ASB16-AS1Q495Z4 193 aa7.67□□□□□ -1.18
TOP3B-202ENST00000398793 ZNF706Q9Y5V0 76 aaPredicted RBP7.67□□□□□ -1.18
TOP3B-202ENST00000398793 FAM229AH3BQW9 127 aa7.66□□□□□ -1.18
TOP3B-202ENST00000398793 TP53AIP1Q9HCN2 124 aa7.66□□□□□ -1.18
TOP3B-202ENST00000398793 HSPG2P98160 4391 aa7.65□□□□□ -1.18
TOP3B-202ENST00000398793 IGHV6-1A0A0B4J1U7 121 aa7.65□□□□□ -1.18
TOP3B-202ENST00000398793 IGLV8-61A0A075B6I0 122 aa7.65□□□□□ -1.19
TOP3B-202ENST00000398793 KRTAP4-5Q9BYR2 181 aa7.64□□□□□ -1.19
TOP3B-202ENST00000398793 A0A1B0GU69 56 aa7.63□□□□□ -1.19
TOP3B-202ENST00000398793 MIR22HGQ0VDD5 57 aa7.61□□□□□ -1.19
TOP3B-202ENST00000398793 KRTAP1-4P0C5Y4 121 aa7.61□□□□□ -1.19
TOP3B-202ENST00000398793 SPATA8Q6RVD6 105 aa7.61□□□□□ -1.19
TOP3B-202ENST00000398793 NOTCH2NLQ7Z3S9 236 aa7.58□□□□□ -1.2
TOP3B-202ENST00000398793 C8orf17Q9NRJ1 99 aa7.58□□□□□ -1.2
TOP3B-202ENST00000398793 CDK2AP2O75956 126 aa7.57□□□□□ -1.2
TOP3B-202ENST00000398793 C9orf92A6NGG3 77 aa7.56□□□□□ -1.2
TOP3B-202ENST00000398793 ACYP2P14621 99 aa7.56□□□□□ -1.2
TOP3B-202ENST00000398793 SPRR1BP22528 89 aa7.55□□□□□ -1.2
TOP3B-202ENST00000398793 UQCR11O14957 56 aa7.55□□□□□ -1.2
TOP3B-202ENST00000398793 LINC00483Q53H64 154 aa7.53□□□□□ -1.2
TOP3B-202ENST00000398793 LINC00304Q8N9R0 145 aa7.51□□□□□ -1.21
TOP3B-202ENST00000398793 MRPL34Q9BQ48 92 aaKnown RBP7.51□□□□□ -1.21
TOP3B-202ENST00000398793 Q8N1X5 172 aa7.48□□□□□ -1.21
TOP3B-202ENST00000398793 Q96NJ1 140 aa7.48□□□□□ -1.21
TOP3B-202ENST00000398793 KRTAP10-4P60372 401 aaPredicted RBP7.47□□□□□ -1.21
TOP3B-202ENST00000398793 A0A1B0GVX0 72 aa7.47□□□□□ -1.21
TOP3B-202ENST00000398793 ROMO1P60602 79 aa7.47□□□□□ -1.21
TOP3B-202ENST00000398793 ABCA13Q86UQ4 5058 aa7.47□□□□□ -1.21
TOP3B-202ENST00000398793 Q5W150 140 aa7.45□□□□□ -1.22
TOP3B-202ENST00000398793 SSBP3-AS1Q7Z2R9 100 aa7.44□□□□□ -1.22
TOP3B-202ENST00000398793 HERC2O95714 4834 aa7.43□□□□□ -1.22
TOP3B-202ENST00000398793 PKHD1L1Q86WI1 4243 aa7.43□□□□□ -1.22
TOP3B-202ENST00000398793 DMAC1Q96GE9 116 aa7.41□□□□□ -1.22
TOP3B-202ENST00000398793 KRTAP25-1Q3LHN0 102 aa7.37□□□□□ -1.23
TOP3B-202ENST00000398793 J3QL48 77 aa7.34□□□□□ -1.23
TOP3B-202ENST00000398793 LPAP08519 4548 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms