RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 ETDBQ3ZM63 59 aa5.64□□□□□ -1.51
NUP98-205ENST00000397007 LINC00846Q9NV44 126 aa5.64□□□□□ -1.51
NUP98-205ENST00000397007 FAT4Q6V0I7 4981 aa5.64□□□□□ -1.51
NUP98-205ENST00000397007 IGKV3D-7A0A0C4DH55 119 aa5.63□□□□□ -1.51
NUP98-205ENST00000397007 A0A1B0GVX0 72 aa5.63□□□□□ -1.51
NUP98-205ENST00000397007 A8MWP4 228 aa5.63□□□□□ -1.51
NUP98-205ENST00000397007 Q6ZVQ6 151 aa5.63□□□□□ -1.51
NUP98-205ENST00000397007 Q8N9P0 234 aaPredicted RBP5.63□□□□□ -1.51
NUP98-205ENST00000397007 LCE2CQ5TA81 110 aa5.61□□□□□ -1.51
NUP98-205ENST00000397007 MMP24-AS1A0A0U1RRL7 71 aa5.6□□□□□ -1.51
NUP98-205ENST00000397007 PRR15Q8IV56 129 aa5.6□□□□□ -1.51
NUP98-205ENST00000397007 C8orf87E5RJ46 101 aa5.6□□□□□ -1.51
NUP98-205ENST00000397007 IGKV4-1P06312 121 aa5.6□□□□□ -1.51
NUP98-205ENST00000397007 C9orf92A6NGG3 77 aa5.58□□□□□ -1.52
NUP98-205ENST00000397007 DEFB116Q30KQ4 102 aa5.58□□□□□ -1.52
NUP98-205ENST00000397007 LCE2AQ5TA79 106 aaPredicted RBP5.56□□□□□ -1.52
NUP98-205ENST00000397007 ACYP1P07311 99 aa5.56□□□□□ -1.52
NUP98-205ENST00000397007 K7EQZ3 153 aa5.56□□□□□ -1.52
NUP98-205ENST00000397007 CXCL6P80162 114 aa5.56□□□□□ -1.52
NUP98-205ENST00000397007 VPS25Q9BRG1 176 aa5.55□□□□□ -1.52
NUP98-205ENST00000397007 MPLKIPQ8TAP9 179 aa5.55□□□□□ -1.52
NUP98-205ENST00000397007 CDIP1Q9H305 208 aa5.55□□□□□ -1.52
NUP98-205ENST00000397007 C8orf17Q9NRJ1 99 aa5.55□□□□□ -1.52
NUP98-205ENST00000397007 LINC00313P59037 77 aa5.54□□□□□ -1.52
NUP98-205ENST00000397007 SEC61BP60468 96 aaKnown RBP5.54□□□□□ -1.52
NUP98-205ENST00000397007 NREPQ16612 68 aa5.54□□□□□ -1.52
NUP98-205ENST00000397007 SIGMAR1Q99720 223 aa5.54□□□□□ -1.52
NUP98-205ENST00000397007 TMEM254Q8TBM7 123 aa5.52□□□□□ -1.53
NUP98-205ENST00000397007 PCOTHQ58A44 107 aa5.51□□□□□ -1.53
NUP98-205ENST00000397007 IGHV6-1A0A0B4J1U7 121 aa5.49□□□□□ -1.53
NUP98-205ENST00000397007 BPY2O14599 106 aa5.48□□□□□ -1.53
NUP98-205ENST00000397007 UBL5Q9BZL1 73 aa5.47□□□□□ -1.53
NUP98-205ENST00000397007 ATP5EP2Q5VTU8 51 aa5.47□□□□□ -1.53
NUP98-205ENST00000397007 HRES1P13985 223 aa5.46□□□□□ -1.54
NUP98-205ENST00000397007 Q8N9L7 120 aa5.45□□□□□ -1.54
NUP98-205ENST00000397007 MRPL34Q9BQ48 92 aaKnown RBP5.45□□□□□ -1.54
NUP98-205ENST00000397007 ZCCHC13Q8WW36 166 aaKnown RBP5.44□□□□□ -1.54
NUP98-205ENST00000397007 hDV103S1A0JD37 113 aa5.43□□□□□ -1.54
NUP98-205ENST00000397007 NDUFB1O75438 58 aa5.43□□□□□ -1.54
NUP98-205ENST00000397007 LINC00643Q86TS7 51 aa5.43□□□□□ -1.54
NUP98-205ENST00000397007 Q5W150 140 aa5.42□□□□□ -1.54
NUP98-205ENST00000397007 HCG22E2RYF7 251 aa5.41□□□□□ -1.54
NUP98-205ENST00000397007 MT1HP80294 61 aa5.4□□□□□ -1.55
NUP98-205ENST00000397007 HIST1H4AP62805 103 aaKnown RBP5.38□□□□□ -1.55
NUP98-205ENST00000397007 ATP11AUNQ6ZP68 121 aa5.37□□□□□ -1.55
NUP98-205ENST00000397007 CASC2Q6XLA1 102 aa5.37□□□□□ -1.55
NUP98-205ENST00000397007 IMUPQ9GZP8 106 aa5.32□□□□□ -1.56
NUP98-205ENST00000397007 OCR1Q9BZK8 76 aa5.32□□□□□ -1.56
NUP98-205ENST00000397007 TP53AIP1Q9HCN2 124 aa5.3□□□□□ -1.56
NUP98-205ENST00000397007 J3QR89 54 aa5.3□□□□□ -1.56
NUP98-205ENST00000397007 WFDC13Q8IUB5 93 aa5.3□□□□□ -1.56
NUP98-205ENST00000397007 LORP23490 312 aaPredicted RBP5.3□□□□□ -1.56
NUP98-205ENST00000397007 A0A087WVE0 104 aa5.29□□□□□ -1.56
NUP98-205ENST00000397007 IGKV2-30P06310 120 aa5.29□□□□□ -1.56
NUP98-205ENST00000397007 SPINK7P58062 85 aa5.29□□□□□ -1.56
NUP98-205ENST00000397007 K7ERU9 68 aa5.28□□□□□ -1.56
NUP98-205ENST00000397007 MT-ATP8P03928 68 aa5.27□□□□□ -1.57
NUP98-205ENST00000397007 KRTAP3-1Q9BYR8 98 aa5.27□□□□□ -1.57
NUP98-205ENST00000397007 A0A0U1RQV1 116 aa5.25□□□□□ -1.57
NUP98-205ENST00000397007 KRTAP10-6P60371 365 aaPredicted RBP5.23□□□□□ -1.57
NUP98-205ENST00000397007 UQCRQO14949 82 aa5.23□□□□□ -1.57
NUP98-205ENST00000397007 KRTAP9-8Q9BYQ0 159 aa5.22□□□□□ -1.57
NUP98-205ENST00000397007 C7orf65Q6ZTY9 151 aa5.21□□□□□ -1.58
NUP98-205ENST00000397007 CYP4F30PQ9H0H9 118 aa5.2□□□□□ -1.58
NUP98-205ENST00000397007 TRAV22A0A0B4J277 110 aa5.19□□□□□ -1.58
NUP98-205ENST00000397007 LCE2DQ5TA82 110 aaPredicted RBP5.16□□□□□ -1.58
NUP98-205ENST00000397007 LOC101927531A0A1B0GV80 90 aa5.15□□□□□ -1.58
NUP98-205ENST00000397007 NDUFS5O43920 106 aa5.15□□□□□ -1.59
NUP98-205ENST00000397007 COX6B2Q6YFQ2 88 aa5.15□□□□□ -1.59
NUP98-205ENST00000397007 KLKP1Q107X0 134 aa5.15□□□□□ -1.59
NUP98-205ENST00000397007 KRTAP3-3Q9BYR6 98 aa5.13□□□□□ -1.59
NUP98-205ENST00000397007 ATOX1O00244 68 aa5.13□□□□□ -1.59
NUP98-205ENST00000397007 H3BPC8 53 aa5.13□□□□□ -1.59
NUP98-205ENST00000397007 RBM12B-AS1Q9P1G2 102 aa5.12□□□□□ -1.59
NUP98-205ENST00000397007 C5orf47Q569G3 176 aa5.12□□□□□ -1.59
NUP98-205ENST00000397007 H1FX-AS1Q4G0G2 97 aa5.11□□□□□ -1.59
NUP98-205ENST00000397007 H0Y9P7 68 aa5.11□□□□□ -1.59
NUP98-205ENST00000397007 IGKV2D-30A0A075B6S6 120 aa5.09□□□□□ -1.59
NUP98-205ENST00000397007 MT2AP02795 61 aa5.09□□□□□ -1.59
NUP98-205ENST00000397007 TRAV7A0A075B6U4 112 aa5.09□□□□□ -1.6
NUP98-205ENST00000397007 FAM236AA0A1B0GUQ0 79 aa5.08□□□□□ -1.6
NUP98-205ENST00000397007 FAM236BA0A1B0GV22 79 aa5.08□□□□□ -1.6
NUP98-205ENST00000397007 SMIM20Q8N5G0 67 aa5.07□□□□□ -1.6
NUP98-205ENST00000397007 MT1FP04733 61 aa5.06□□□□□ -1.6
NUP98-205ENST00000397007 C4orf26Q17RF5 130 aa5.06□□□□□ -1.6
NUP98-205ENST00000397007 C1orf64Q8NEQ6 169 aa5.05□□□□□ -1.6
NUP98-205ENST00000397007 KRTAP9-3Q9BYQ3 159 aa5.05□□□□□ -1.6
NUP98-205ENST00000397007 LCA10Q71F78 164 aa5.01□□□□□ -1.61
NUP98-205ENST00000397007 DMAC1Q96GE9 116 aa5□□□□□ -1.61
NUP98-205ENST00000397007 A8MUN3 132 aa5□□□□□ -1.61
NUP98-205ENST00000397007 LINC00208Q96KT6 92 aa5□□□□□ -1.61
NUP98-205ENST00000397007 SERP2Q8N6R1 65 aa5□□□□□ -1.61
NUP98-205ENST00000397007 KRTAP9-2Q9BYQ4 174 aa4.99□□□□□ -1.61
NUP98-205ENST00000397007 SCGB1A1P11684 91 aa4.98□□□□□ -1.61
NUP98-205ENST00000397007 MP68P56378 58 aa4.97□□□□□ -1.61
NUP98-205ENST00000397007 USH2AO75445 5202 aa4.95□□□□□ -1.62
NUP98-205ENST00000397007 FAM236DA0A1B0GTK5 79 aa4.95□□□□□ -1.62
NUP98-205ENST00000397007 FAM236CP0DP71 79 aa4.95□□□□□ -1.62
NUP98-205ENST00000397007 H0YAA0 97 aa4.94□□□□□ -1.62
NUP98-205ENST00000397007 CYSTM1Q9H1C7 97 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms