RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 CFAP54Q96N23 3096 aa7.48□□□□□ -1.21
GNE-202ENST00000396594 A0A0C4DFX4 3053 aa7.47□□□□□ -1.21
GNE-202ENST00000396594 KRTAP12-2P59991 146 aa7.45□□□□□ -1.22
GNE-202ENST00000396594 PRUNE2Q8WUY3 3088 aa7.44□□□□□ -1.22
GNE-202ENST00000396594 EYSQ5T1H1 3165 aa7.41□□□□□ -1.22
GNE-202ENST00000396594 KRTAP3-1Q9BYR8 98 aa7.41□□□□□ -1.22
GNE-202ENST00000396594 HRNRQ86YZ3 2850 aaPredicted RBP7.41□□□□□ -1.22
GNE-202ENST00000396594 ATMQ13315 3056 aa7.38□□□□□ -1.23
GNE-202ENST00000396594 TNRC18O15417 2968 aaPredicted RBP7.36□□□□□ -1.23
GNE-202ENST00000396594 UTRNP46939 3433 aa7.36□□□□□ -1.23
GNE-202ENST00000396594 UNC80Q8N2C7 3258 aa7.34□□□□□ -1.24
GNE-202ENST00000396594 MT1HL1P0DM35 61 aa7.33□□□□□ -1.24
GNE-202ENST00000396594 COL12A1Q99715 3063 aa7.33□□□□□ -1.24
GNE-202ENST00000396594 MKI67P46013 3256 aaKnown RBP7.31□□□□□ -1.24
GNE-202ENST00000396594 KRTAP23-1A1A580 65 aa7.3□□□□□ -1.24
GNE-202ENST00000396594 TRIOO75962 3097 aa7.28□□□□□ -1.24
GNE-202ENST00000396594 LAMA3Q16787 3333 aa7.28□□□□□ -1.24
GNE-202ENST00000396594 KALRNO60229 2985 aa7.27□□□□□ -1.25
GNE-202ENST00000396594 KRTAP10-6P60371 365 aaPredicted RBP7.27□□□□□ -1.25
GNE-202ENST00000396594 TACC2O95359 2948 aa7.24□□□□□ -1.25
GNE-202ENST00000396594 TENM2Q9NT68 2774 aa7.22□□□□□ -1.25
GNE-202ENST00000396594 VPS13AQ96RL7 3174 aa7.21□□□□□ -1.25
GNE-202ENST00000396594 PDZD2O15018 2839 aa7.21□□□□□ -1.25
GNE-202ENST00000396594 KRTAP10-4P60372 401 aaPredicted RBP7.2□□□□□ -1.26
GNE-202ENST00000396594 ZZEF1O43149 2961 aa7.19□□□□□ -1.26
GNE-202ENST00000396594 DCHS2Q6V1P9 2916 aa7.18□□□□□ -1.26
GNE-202ENST00000396594 FRYLO94915 3013 aa7.18□□□□□ -1.26
GNE-202ENST00000396594 DMXL2Q8TDJ6 3036 aa7.17□□□□□ -1.26
GNE-202ENST00000396594 NBEAQ8NFP9 2946 aa7.17□□□□□ -1.26
GNE-202ENST00000396594 TENM1Q9UKZ4 2725 aa7.17□□□□□ -1.26
GNE-202ENST00000396594 ADGRG4Q8IZF6 3080 aa7.16□□□□□ -1.26
GNE-202ENST00000396594 KRTAP15-1Q3LI76 137 aa7.16□□□□□ -1.26
GNE-202ENST00000396594 CELSR2Q9HCU4 2923 aa7.16□□□□□ -1.26
GNE-202ENST00000396594 MXRA5Q9NR99 2828 aa7.15□□□□□ -1.26
GNE-202ENST00000396594 ZANQ9Y493 2812 aa7.15□□□□□ -1.27
GNE-202ENST00000396594 LCE2DQ5TA82 110 aaPredicted RBP7.14□□□□□ -1.27
GNE-202ENST00000396594 NF1P21359 2839 aa7.12□□□□□ -1.27
GNE-202ENST00000396594 LAMA2P24043 3122 aaKnown RBP7.12□□□□□ -1.27
GNE-202ENST00000396594 TENM3Q9P273 2699 aa7.11□□□□□ -1.27
GNE-202ENST00000396594 TGP01266 2768 aa7.11□□□□□ -1.27
GNE-202ENST00000396594 PCNTO95613 3336 aa7.1□□□□□ -1.27
GNE-202ENST00000396594 ALMS1Q8TCU4 4167 aa7.04□□□□□ -1.28
GNE-202ENST00000396594 HUWE1Q7Z6Z7 4374 aaKnown RBP7.04□□□□□ -1.28
GNE-202ENST00000396594 INE1O15225 51 aa7.03□□□□□ -1.28
GNE-202ENST00000396594 KRTAP3-2Q9BYR7 98 aa7.02□□□□□ -1.29
GNE-202ENST00000396594 CRYBG3Q68DQ2 2970 aa7.01□□□□□ -1.29
GNE-202ENST00000396594 ASH1LQ9NR48 2969 aaKnown RBP7.01□□□□□ -1.29
GNE-202ENST00000396594 KRTAP3-3Q9BYR6 98 aa7□□□□□ -1.29
GNE-202ENST00000396594 KRTAP10-12P60413 245 aa6.99□□□□□ -1.29
GNE-202ENST00000396594 FBN2P35556 2912 aa6.99□□□□□ -1.29
GNE-202ENST00000396594 CELSR1Q9NYQ6 3014 aa6.93□□□□□ -1.3
GNE-202ENST00000396594 ANK3Q12955 4377 aaKnown RBP6.91□□□□□ -1.3
GNE-202ENST00000396594 BOD1L1Q8NFC6 3051 aa6.85□□□□□ -1.31
GNE-202ENST00000396594 CDH23Q9H251 3354 aa6.82□□□□□ -1.32
GNE-202ENST00000396594 BRCA2P51587 3418 aa6.82□□□□□ -1.32
GNE-202ENST00000396594 COL6A3P12111 3177 aa6.81□□□□□ -1.32
GNE-202ENST00000396594 DMXL1Q9Y485 3027 aa6.8□□□□□ -1.32
GNE-202ENST00000396594 OTOGQ6ZRI0 2925 aa6.79□□□□□ -1.32
GNE-202ENST00000396594 USP34Q70CQ2 3546 aa6.78□□□□□ -1.32
GNE-202ENST00000396594 SZT2Q5T011 3432 aa6.78□□□□□ -1.32
GNE-202ENST00000396594 XIRP2A4UGR9 3374 aa6.77□□□□□ -1.33
GNE-202ENST00000396594 KRTAP12-3P60328 96 aa6.75□□□□□ -1.33
GNE-202ENST00000396594 REV3LO60673 3130 aa6.73□□□□□ -1.33
GNE-202ENST00000396594 KRTAP19-4Q3LI73 84 aa6.71□□□□□ -1.33
GNE-202ENST00000396594 KRTAP4-5Q9BYR2 181 aa6.67□□□□□ -1.34
GNE-202ENST00000396594 VWFP04275 2813 aa6.62□□□□□ -1.35
GNE-202ENST00000396594 CELSR3Q9NYQ7 3312 aa6.62□□□□□ -1.35
GNE-202ENST00000396594 DNAH2Q9P225 4427 aa6.62□□□□□ -1.35
GNE-202ENST00000396594 VCANP13611 3396 aa6.59□□□□□ -1.35
GNE-202ENST00000396594 FREM2Q5SZK8 3169 aa6.59□□□□□ -1.35
GNE-202ENST00000396594 DNAH10Q8IVF4 4471 aa6.53□□□□□ -1.36
GNE-202ENST00000396594 LCE3AQ5TA76 89 aa6.52□□□□□ -1.37
GNE-202ENST00000396594 DNAH1Q9P2D7 4330 aa6.5□□□□□ -1.37
GNE-202ENST00000396594 SPTBN5Q9NRC6 3674 aaKnown RBP6.5□□□□□ -1.37
GNE-202ENST00000396594 MEGF8Q7Z7M0 2845 aa6.48□□□□□ -1.37
GNE-202ENST00000396594 FBN1P35555 2871 aaKnown RBP6.47□□□□□ -1.37
GNE-202ENST00000396594 SPRR2GQ9BYE4 73 aa6.46□□□□□ -1.38
GNE-202ENST00000396594 KRTAP8-1Q8IUC2 63 aa6.45□□□□□ -1.38
GNE-202ENST00000396594 PKD1L1Q8TDX9 2849 aa6.45□□□□□ -1.38
GNE-202ENST00000396594 CFAP47Q6ZTR5 3102 aa6.4□□□□□ -1.38
GNE-202ENST00000396594 FBN3Q75N90 2809 aa6.38□□□□□ -1.39
GNE-202ENST00000396594 MT1HP80294 61 aa6.38□□□□□ -1.39
GNE-202ENST00000396594 DNAH11Q96DT5 4516 aa6.37□□□□□ -1.39
GNE-202ENST00000396594 DNAH14Q0VDD8 3507 aa6.35□□□□□ -1.39
GNE-202ENST00000396594 LORP23490 312 aaPredicted RBP6.31□□□□□ -1.4
GNE-202ENST00000396594 LOC400499M0QZD8 3231 aa6.31□□□□□ -1.4
GNE-202ENST00000396594 MT2AP02795 61 aa6.28□□□□□ -1.4
GNE-202ENST00000396594 DNAH9Q9NYC9 4486 aa6.28□□□□□ -1.4
GNE-202ENST00000396594 CRCT1Q9UGL9 99 aa6.22□□□□□ -1.41
GNE-202ENST00000396594 KRTAP4-1Q9BYQ7 146 aa6.2□□□□□ -1.42
GNE-202ENST00000396594 NBPF19A0A087WUL8 3843 aa6.19□□□□□ -1.42
GNE-202ENST00000396594 SPEGQ15772 3267 aa6.18□□□□□ -1.42
GNE-202ENST00000396594 DYNC1H1Q14204 4646 aaKnown RBP6.16□□□□□ -1.42
GNE-202ENST00000396594 DNAH17Q9UFH2 4485 aa6.16□□□□□ -1.42
GNE-202ENST00000396594 DNAH5Q8TE73 4624 aa6.13□□□□□ -1.43
GNE-202ENST00000396594 VPS13DQ5THJ4 4388 aa6.12□□□□□ -1.43
GNE-202ENST00000396594 KRTAP19-8Q3LI54 63 aa6.08□□□□□ -1.44
GNE-202ENST00000396594 HERC1Q15751 4861 aa6.05□□□□□ -1.44
GNE-202ENST00000396594 MT1FP04733 61 aa6.05□□□□□ -1.44
GNE-202ENST00000396594 PLECQ15149 4684 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms