RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 C1orf64Q8NEQ6 169 aa9.42□□□□□ -0.9
SNX6-202ENST00000396526 DNAH5Q8TE73 4624 aa9.42□□□□□ -0.9
SNX6-202ENST00000396526 KRTAP1-4P0C5Y4 121 aa9.4□□□□□ -0.9
SNX6-202ENST00000396526 SPINK1P00995 79 aa9.37□□□□□ -0.91
SNX6-202ENST00000396526 SMIM26A0A096LP01 95 aa9.36□□□□□ -0.91
SNX6-202ENST00000396526 LINC00313P59037 77 aa9.36□□□□□ -0.91
SNX6-202ENST00000396526 A0A1B0GVY2 172 aa9.35□□□□□ -0.91
SNX6-202ENST00000396526 FRAS1Q86XX4 4008 aa9.35□□□□□ -0.91
SNX6-202ENST00000396526 SMR3BP02814 79 aaPredicted RBP9.35□□□□□ -0.91
SNX6-202ENST00000396526 C1orf195Q5TG92 126 aa9.34□□□□□ -0.91
SNX6-202ENST00000396526 HYDINQ4G0P3 5121 aa9.34□□□□□ -0.91
SNX6-202ENST00000396526 OXTP01178 125 aa9.33□□□□□ -0.92
SNX6-202ENST00000396526 SPAG11AQ6PDA7 123 aa9.33□□□□□ -0.92
SNX6-202ENST00000396526 NOTCH2NLQ7Z3S9 236 aa9.32□□□□□ -0.92
SNX6-202ENST00000396526 FAT2Q9NYQ8 4349 aa9.32□□□□□ -0.92
SNX6-202ENST00000396526 SPANXA2-OT1Q8N9U9 137 aa9.32□□□□□ -0.92
SNX6-202ENST00000396526 CYP4F30PQ9H0H9 118 aa9.3□□□□□ -0.92
SNX6-202ENST00000396526 LINC00304Q8N9R0 145 aa9.29□□□□□ -0.92
SNX6-202ENST00000396526 LRP1BQ9NZR2 4599 aa9.29□□□□□ -0.92
SNX6-202ENST00000396526 PKD1P98161 4303 aa9.29□□□□□ -0.92
SNX6-202ENST00000396526 PRR4Q16378 134 aa9.29□□□□□ -0.92
SNX6-202ENST00000396526 PRR26Q8N8Z3 221 aa9.27□□□□□ -0.92
SNX6-202ENST00000396526 SACSQ9NZJ4 4579 aa9.26□□□□□ -0.93
SNX6-202ENST00000396526 LOC101927531A0A1B0GV80 90 aa9.25□□□□□ -0.93
SNX6-202ENST00000396526 RPS29P62273 56 aaKnown RBP9.25□□□□□ -0.93
SNX6-202ENST00000396526 PCOTHQ58A44 107 aa9.23□□□□□ -0.93
SNX6-202ENST00000396526 FAM229AH3BQW9 127 aa9.23□□□□□ -0.93
SNX6-202ENST00000396526 IGLV7-46A0A075B6I9 117 aa9.2□□□□□ -0.94
SNX6-202ENST00000396526 Q8N9P0 234 aaPredicted RBP9.19□□□□□ -0.94
SNX6-202ENST00000396526 C4orf26Q17RF5 130 aa9.15□□□□□ -0.94
SNX6-202ENST00000396526 FP248Q71RG6 208 aaPredicted RBP9.15□□□□□ -0.95
SNX6-202ENST00000396526 Q5W150 140 aa9.14□□□□□ -0.95
SNX6-202ENST00000396526 VPS13BQ7Z7G8 4022 aa9.14□□□□□ -0.95
SNX6-202ENST00000396526 MPLKIPQ8TAP9 179 aa9.13□□□□□ -0.95
SNX6-202ENST00000396526 DYNC1H1Q14204 4646 aaKnown RBP9.12□□□□□ -0.95
SNX6-202ENST00000396526 KRTAP10-4P60372 401 aaPredicted RBP9.1□□□□□ -0.95
SNX6-202ENST00000396526 V9GYY9 64 aa9.1□□□□□ -0.95
SNX6-202ENST00000396526 KRTAP13-3Q3SY46 172 aa9.09□□□□□ -0.95
SNX6-202ENST00000396526 KRTAP16-1A8MUX0 517 aa9.08□□□□□ -0.96
SNX6-202ENST00000396526 RETNLBQ9BQ08 111 aa9.08□□□□□ -0.96
SNX6-202ENST00000396526 PKHD1P08F94 4074 aa9.07□□□□□ -0.96
SNX6-202ENST00000396526 COA5Q86WW8 74 aa9.05□□□□□ -0.96
SNX6-202ENST00000396526 IGKV2-30P06310 120 aa9.03□□□□□ -0.96
SNX6-202ENST00000396526 Q1T7F1 81 aa9.03□□□□□ -0.96
SNX6-202ENST00000396526 RYR2Q92736 4967 aa9.01□□□□□ -0.97
SNX6-202ENST00000396526 Q5VSD8 79 aa9□□□□□ -0.97
SNX6-202ENST00000396526 ACYP2P14621 99 aa8.99□□□□□ -0.97
SNX6-202ENST00000396526 IGKV2D-30A0A075B6S6 120 aa8.99□□□□□ -0.97
SNX6-202ENST00000396526 HRES1P13985 223 aa8.98□□□□□ -0.97
SNX6-202ENST00000396526 APOBP04114 4563 aaKnown RBP8.96□□□□□ -0.98
SNX6-202ENST00000396526 FAT1Q14517 4588 aa8.95□□□□□ -0.98
SNX6-202ENST00000396526 C9orf92A6NGG3 77 aa8.93□□□□□ -0.98
SNX6-202ENST00000396526 CHKB-CPT1BH3BT56 60 aa8.93□□□□□ -0.98
SNX6-202ENST00000396526 C7orf65Q6ZTY9 151 aa8.92□□□□□ -0.98
SNX6-202ENST00000396526 DMAC1Q96GE9 116 aa8.9□□□□□ -0.99
SNX6-202ENST00000396526 KMT2CQ8NEZ4 4911 aaKnown RBP8.89□□□□□ -0.99
SNX6-202ENST00000396526 PSPHP1O15172 72 aa8.89□□□□□ -0.99
SNX6-202ENST00000396526 C20orf166-AS1Q96NR2 134 aa8.88□□□□□ -0.99
SNX6-202ENST00000396526 A8MUU9 505 aa8.87□□□□□ -0.99
SNX6-202ENST00000396526 KRTAP10-8P60410 259 aa8.87□□□□□ -0.99
SNX6-202ENST00000396526 Q8N1X5 172 aa8.86□□□□□ -0.99
SNX6-202ENST00000396526 BRK1Q8WUW1 75 aa8.84□□□□□ -0.99
SNX6-202ENST00000396526 A8MUN3 132 aa8.84□□□□□ -0.99
SNX6-202ENST00000396526 PRR15LQ9BU68 103 aa8.84□□□□□ -0.99
SNX6-202ENST00000396526 SVIPQ8NHG7 77 aa8.82□□□□□ -1
SNX6-202ENST00000396526 FLG2Q5D862 2391 aaPredicted RBP8.81□□□□□ -1
SNX6-202ENST00000396526 PRO0628Q9UI54 55 aa8.79□□□□□ -1
SNX6-202ENST00000396526 LINC01558Q9Y6Z2 57 aa8.79□□□□□ -1
SNX6-202ENST00000396526 Q75L30 129 aa8.77□□□□□ -1.01
SNX6-202ENST00000396526 DMBT1Q9UGM3 2413 aaPredicted RBP8.77□□□□□ -1.01
SNX6-202ENST00000396526 Q5VV11 94 aa8.74□□□□□ -1.01
SNX6-202ENST00000396526 ATP11AUNQ6ZP68 121 aa8.73□□□□□ -1.01
SNX6-202ENST00000396526 PKHD1L1Q86WI1 4243 aa8.71□□□□□ -1.02
SNX6-202ENST00000396526 SPINK7P58062 85 aa8.7□□□□□ -1.02
SNX6-202ENST00000396526 A6NED7 52 aa8.68□□□□□ -1.02
SNX6-202ENST00000396526 SPTSSBQ8NFR3 76 aa8.68□□□□□ -1.02
SNX6-202ENST00000396526 HSPG2P98160 4391 aa8.65□□□□□ -1.03
SNX6-202ENST00000396526 RYR1P21817 5038 aa8.63□□□□□ -1.03
SNX6-202ENST00000396526 A0A1B0GU69 56 aa8.62□□□□□ -1.03
SNX6-202ENST00000396526 RYR3Q15413 4870 aa8.62□□□□□ -1.03
SNX6-202ENST00000396526 RPL37P61927 97 aaKnown RBP8.61□□□□□ -1.03
SNX6-202ENST00000396526 MT1HL1P0DM35 61 aa8.59□□□□□ -1.03
SNX6-202ENST00000396526 SEC61GP60059 68 aa8.57□□□□□ -1.04
SNX6-202ENST00000396526 XP32Q5T750 250 aa8.56□□□□□ -1.04
SNX6-202ENST00000396526 LRP1Q07954 4544 aaKnown RBP8.56□□□□□ -1.04
SNX6-202ENST00000396526 KRTAP17-1Q9BYP8 105 aa8.55□□□□□ -1.04
SNX6-202ENST00000396526 COX6B2Q6YFQ2 88 aa8.54□□□□□ -1.04
SNX6-202ENST00000396526 KIAA1109Q2LD37 5005 aa8.53□□□□□ -1.04
SNX6-202ENST00000396526 CDC42SE1Q9NRR8 79 aa8.52□□□□□ -1.05
SNX6-202ENST00000396526 TNXBP22105 4242 aa8.5□□□□□ -1.05
SNX6-202ENST00000396526 FAT3Q8TDW7 4589 aa8.5□□□□□ -1.05
SNX6-202ENST00000396526 TPRXLQ17RH7 258 aa8.45□□□□□ -1.06
SNX6-202ENST00000396526 LCA10Q71F78 164 aa8.45□□□□□ -1.06
SNX6-202ENST00000396526 UQCR11O14957 56 aa8.44□□□□□ -1.06
SNX6-202ENST00000396526 KRTAP3-1Q9BYR8 98 aa8.44□□□□□ -1.06
SNX6-202ENST00000396526 J3QL48 77 aa8.4□□□□□ -1.07
SNX6-202ENST00000396526 PMAIP1Q13794 54 aa8.39□□□□□ -1.07
SNX6-202ENST00000396526 A8MU10 97 aa8.37□□□□□ -1.07
SNX6-202ENST00000396526 MIR22HGQ0VDD5 57 aa8.35□□□□□ -1.07
SNX6-202ENST00000396526 KRTAP4-5Q9BYR2 181 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms