RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 DMBT1Q9UGM3 2413 aaPredicted RBP8.47□□□□□ -1.05
RTFDC1-203ENST00000395881 LRP1Q07954 4544 aaKnown RBP8.46□□□□□ -1.05
RTFDC1-203ENST00000395881 FAT3Q8TDW7 4589 aa8.46□□□□□ -1.06
RTFDC1-203ENST00000395881 HRCT1Q6UXD1 115 aa8.46□□□□□ -1.06
RTFDC1-203ENST00000395881 NDUFC1O43677 76 aa8.45□□□□□ -1.06
RTFDC1-203ENST00000395881 CYSTM1Q9H1C7 97 aa8.45□□□□□ -1.06
RTFDC1-203ENST00000395881 HERC1Q15751 4861 aa8.45□□□□□ -1.06
RTFDC1-203ENST00000395881 KRTAP1-4P0C5Y4 121 aa8.44□□□□□ -1.06
RTFDC1-203ENST00000395881 SPINK6Q6UWN8 80 aa8.44□□□□□ -1.06
RTFDC1-203ENST00000395881 Q5XG85 94 aa8.44□□□□□ -1.06
RTFDC1-203ENST00000395881 CASC2Q6XLA1 102 aa8.44□□□□□ -1.06
RTFDC1-203ENST00000395881 TMEM254Q8TBM7 123 aa8.44□□□□□ -1.06
RTFDC1-203ENST00000395881 A0A087X002 238 aa8.43□□□□□ -1.06
RTFDC1-203ENST00000395881 KRTAP13-2Q52LG2 175 aa8.42□□□□□ -1.06
RTFDC1-203ENST00000395881 C5orf47Q569G3 176 aa8.42□□□□□ -1.06
RTFDC1-203ENST00000395881 WFDC13Q8IUB5 93 aa8.41□□□□□ -1.06
RTFDC1-203ENST00000395881 A0A0U1RQV1 116 aa8.4□□□□□ -1.06
RTFDC1-203ENST00000395881 MMP24-AS1A0A0U1RRL7 71 aa8.4□□□□□ -1.06
RTFDC1-203ENST00000395881 A0A1B0GVX0 72 aa8.39□□□□□ -1.07
RTFDC1-203ENST00000395881 H7BZZ5 65 aa8.39□□□□□ -1.07
RTFDC1-203ENST00000395881 SNURFQ9Y675 71 aa8.37□□□□□ -1.07
RTFDC1-203ENST00000395881 hDV103S1A0JD37 113 aa8.36□□□□□ -1.07
RTFDC1-203ENST00000395881 C8orf17Q9NRJ1 99 aa8.36□□□□□ -1.07
RTFDC1-203ENST00000395881 J3QL48 77 aa8.35□□□□□ -1.07
RTFDC1-203ENST00000395881 LIMD2Q9BT23 127 aa8.35□□□□□ -1.07
RTFDC1-203ENST00000395881 OXTP01178 125 aa8.34□□□□□ -1.07
RTFDC1-203ENST00000395881 C4orf48Q5BLP8 95 aa8.34□□□□□ -1.07
RTFDC1-203ENST00000395881 H3BPC8 53 aa8.33□□□□□ -1.08
RTFDC1-203ENST00000395881 RPS28P62857 69 aaKnown RBP8.33□□□□□ -1.08
RTFDC1-203ENST00000395881 ZCCHC13Q8WW36 166 aaKnown RBP8.33□□□□□ -1.08
RTFDC1-203ENST00000395881 TP53AIP1Q9HCN2 124 aa8.33□□□□□ -1.08
RTFDC1-203ENST00000395881 ATP5EP56381 51 aaPredicted RBP8.32□□□□□ -1.08
RTFDC1-203ENST00000395881 IGHV6-1A0A0B4J1U7 121 aa8.31□□□□□ -1.08
RTFDC1-203ENST00000395881 MP68P56378 58 aa8.31□□□□□ -1.08
RTFDC1-203ENST00000395881 TYMSOSQ8TAI1 123 aa8.31□□□□□ -1.08
RTFDC1-203ENST00000395881 FAM236DA0A1B0GTK5 79 aa8.31□□□□□ -1.08
RTFDC1-203ENST00000395881 C8orf87E5RJ46 101 aa8.31□□□□□ -1.08
RTFDC1-203ENST00000395881 SPINK1P00995 79 aa8.31□□□□□ -1.08
RTFDC1-203ENST00000395881 FAM236CP0DP71 79 aa8.31□□□□□ -1.08
RTFDC1-203ENST00000395881 RPS29P62273 56 aaKnown RBP8.31□□□□□ -1.08
RTFDC1-203ENST00000395881 SPAG11AQ6PDA7 123 aa8.28□□□□□ -1.08
RTFDC1-203ENST00000395881 MRPL34Q9BQ48 92 aaKnown RBP8.28□□□□□ -1.08
RTFDC1-203ENST00000395881 MT1HL1P0DM35 61 aa8.27□□□□□ -1.09
RTFDC1-203ENST00000395881 C1orf195Q5TG92 126 aa8.27□□□□□ -1.09
RTFDC1-203ENST00000395881 TNXBP22105 4242 aa8.26□□□□□ -1.09
RTFDC1-203ENST00000395881 TRAV22A0A0B4J277 110 aa8.25□□□□□ -1.09
RTFDC1-203ENST00000395881 H0Y9P7 68 aa8.24□□□□□ -1.09
RTFDC1-203ENST00000395881 LINC00304Q8N9R0 145 aa8.22□□□□□ -1.09
RTFDC1-203ENST00000395881 NOTCH2NLQ7Z3S9 236 aa8.22□□□□□ -1.09
RTFDC1-203ENST00000395881 PRR26Q8N8Z3 221 aa8.22□□□□□ -1.09
RTFDC1-203ENST00000395881 LINC00208Q96KT6 92 aa8.2□□□□□ -1.1
RTFDC1-203ENST00000395881 SERP1Q9Y6X1 66 aa8.2□□□□□ -1.1
RTFDC1-203ENST00000395881 LINC00313P59037 77 aa8.19□□□□□ -1.1
RTFDC1-203ENST00000395881 KRTAP10-8P60410 259 aa8.18□□□□□ -1.1
RTFDC1-203ENST00000395881 HMCN2Q8NDA2 5059 aa8.18□□□□□ -1.1
RTFDC1-203ENST00000395881 C1orf64Q8NEQ6 169 aa8.18□□□□□ -1.1
RTFDC1-203ENST00000395881 NDUFS5O43920 106 aa8.17□□□□□ -1.1
RTFDC1-203ENST00000395881 Q8N9P0 234 aaPredicted RBP8.15□□□□□ -1.1
RTFDC1-203ENST00000395881 SPANXA2-OT1Q8N9U9 137 aa8.14□□□□□ -1.11
RTFDC1-203ENST00000395881 CYP4F30PQ9H0H9 118 aa8.12□□□□□ -1.11
RTFDC1-203ENST00000395881 KRTAP16-1A8MUX0 517 aa8.11□□□□□ -1.11
RTFDC1-203ENST00000395881 KRTAP13-3Q3SY46 172 aa8.1□□□□□ -1.11
RTFDC1-203ENST00000395881 LOC101927531A0A1B0GV80 90 aa8.09□□□□□ -1.11
RTFDC1-203ENST00000395881 LCE2BO14633 110 aa8.05□□□□□ -1.12
RTFDC1-203ENST00000395881 Q5W150 140 aa8.04□□□□□ -1.12
RTFDC1-203ENST00000395881 IGLV7-46A0A075B6I9 117 aa8.02□□□□□ -1.13
RTFDC1-203ENST00000395881 SMIM26A0A096LP01 95 aa8.02□□□□□ -1.13
RTFDC1-203ENST00000395881 UBR4Q5T4S7 5183 aa7.97□□□□□ -1.13
RTFDC1-203ENST00000395881 PCOTHQ58A44 107 aa7.96□□□□□ -1.14
RTFDC1-203ENST00000395881 IGKV2-30P06310 120 aa7.94□□□□□ -1.14
RTFDC1-203ENST00000395881 PRR4Q16378 134 aa7.94□□□□□ -1.14
RTFDC1-203ENST00000395881 LRP2P98164 4655 aa7.94□□□□□ -1.14
RTFDC1-203ENST00000395881 C20orf166-AS1Q96NR2 134 aa7.92□□□□□ -1.14
RTFDC1-203ENST00000395881 A8MUU9 505 aa7.91□□□□□ -1.14
RTFDC1-203ENST00000395881 FP248Q71RG6 208 aaPredicted RBP7.9□□□□□ -1.14
RTFDC1-203ENST00000395881 LPAP08519 4548 aa7.85□□□□□ -1.15
RTFDC1-203ENST00000395881 HRES1P13985 223 aa7.84□□□□□ -1.15
RTFDC1-203ENST00000395881 RETNLBQ9BQ08 111 aa7.84□□□□□ -1.15
RTFDC1-203ENST00000395881 C9orf92A6NGG3 77 aa7.83□□□□□ -1.16
RTFDC1-203ENST00000395881 COA5Q86WW8 74 aa7.83□□□□□ -1.16
RTFDC1-203ENST00000395881 Q1T7F1 81 aa7.82□□□□□ -1.16
RTFDC1-203ENST00000395881 C7orf65Q6ZTY9 151 aa7.81□□□□□ -1.16
RTFDC1-203ENST00000395881 Q75L30 129 aa7.81□□□□□ -1.16
RTFDC1-203ENST00000395881 DMAC1Q96GE9 116 aa7.81□□□□□ -1.16
RTFDC1-203ENST00000395881 V9GYY9 64 aa7.8□□□□□ -1.16
RTFDC1-203ENST00000395881 IGKV2D-30A0A075B6S6 120 aa7.8□□□□□ -1.16
RTFDC1-203ENST00000395881 ACYP2P14621 99 aa7.8□□□□□ -1.16
RTFDC1-203ENST00000395881 C4orf26Q17RF5 130 aa7.79□□□□□ -1.16
RTFDC1-203ENST00000395881 RNF213Q63HN8 5207 aa7.77□□□□□ -1.17
RTFDC1-203ENST00000395881 MPLKIPQ8TAP9 179 aa7.76□□□□□ -1.17
RTFDC1-203ENST00000395881 A8MUN3 132 aa7.71□□□□□ -1.18
RTFDC1-203ENST00000395881 RPL37P61927 97 aaKnown RBP7.67□□□□□ -1.18
RTFDC1-203ENST00000395881 ATP11AUNQ6ZP68 121 aa7.66□□□□□ -1.18
RTFDC1-203ENST00000395881 SPINK7P58062 85 aa7.65□□□□□ -1.18
RTFDC1-203ENST00000395881 CHKB-CPT1BH3BT56 60 aa7.64□□□□□ -1.19
RTFDC1-203ENST00000395881 XP32Q5T750 250 aa7.64□□□□□ -1.19
RTFDC1-203ENST00000395881 LINC01558Q9Y6Z2 57 aa7.63□□□□□ -1.19
RTFDC1-203ENST00000395881 TPRXLQ17RH7 258 aa7.62□□□□□ -1.19
RTFDC1-203ENST00000395881 LCE2CQ5TA81 110 aa7.61□□□□□ -1.19
RTFDC1-203ENST00000395881 PSPHP1O15172 72 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms