RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 ASB16-AS1Q495Z4 193 aa8.79□□□□□ -1
SCAF11-204ENST00000395454 HRCT1Q6UXD1 115 aa8.78□□□□□ -1
SCAF11-204ENST00000395454 CYSTM1Q9H1C7 97 aa8.78□□□□□ -1
SCAF11-204ENST00000395454 KLKP1Q107X0 134 aa8.78□□□□□ -1
SCAF11-204ENST00000395454 OXTP01178 125 aa8.77□□□□□ -1.01
SCAF11-204ENST00000395454 Q5XG85 94 aa8.77□□□□□ -1.01
SCAF11-204ENST00000395454 C20orf197Q8N268 126 aa8.75□□□□□ -1.01
SCAF11-204ENST00000395454 TYMSOSQ8TAI1 123 aa8.75□□□□□ -1.01
SCAF11-204ENST00000395454 NDUFB1O75438 58 aa8.74□□□□□ -1.01
SCAF11-204ENST00000395454 MMP24-AS1A0A0U1RRL7 71 aa8.73□□□□□ -1.01
SCAF11-204ENST00000395454 J3QL48 77 aa8.72□□□□□ -1.01
SCAF11-204ENST00000395454 MT1HL1P0DM35 61 aa8.71□□□□□ -1.02
SCAF11-204ENST00000395454 KRTAP10-8P60410 259 aa8.71□□□□□ -1.02
SCAF11-204ENST00000395454 CASC2Q6XLA1 102 aa8.71□□□□□ -1.02
SCAF11-204ENST00000395454 WFDC13Q8IUB5 93 aa8.7□□□□□ -1.02
SCAF11-204ENST00000395454 TMEM254Q8TBM7 123 aa8.7□□□□□ -1.02
SCAF11-204ENST00000395454 A0A1B0GVX0 72 aa8.7□□□□□ -1.02
SCAF11-204ENST00000395454 TMEM258P61165 79 aa8.69□□□□□ -1.02
SCAF11-204ENST00000395454 DMBT1Q9UGM3 2413 aaPredicted RBP8.69□□□□□ -1.02
SCAF11-204ENST00000395454 A0A0U1RQV1 116 aa8.68□□□□□ -1.02
SCAF11-204ENST00000395454 H7BZZ5 65 aa8.67□□□□□ -1.02
SCAF11-204ENST00000395454 C8orf17Q9NRJ1 99 aa8.67□□□□□ -1.02
SCAF11-204ENST00000395454 NDUFC1O43677 76 aa8.66□□□□□ -1.02
SCAF11-204ENST00000395454 hDV103S1A0JD37 113 aa8.65□□□□□ -1.02
SCAF11-204ENST00000395454 C5orf47Q569G3 176 aa8.65□□□□□ -1.02
SCAF11-204ENST00000395454 SNURFQ9Y675 71 aa8.64□□□□□ -1.03
SCAF11-204ENST00000395454 LINC00304Q8N9R0 145 aa8.64□□□□□ -1.03
SCAF11-204ENST00000395454 ZCCHC13Q8WW36 166 aaKnown RBP8.63□□□□□ -1.03
SCAF11-204ENST00000395454 LIMD2Q9BT23 127 aa8.63□□□□□ -1.03
SCAF11-204ENST00000395454 RPS29P62273 56 aaKnown RBP8.62□□□□□ -1.03
SCAF11-204ENST00000395454 SPINK1P00995 79 aa8.62□□□□□ -1.03
SCAF11-204ENST00000395454 C4orf48Q5BLP8 95 aa8.62□□□□□ -1.03
SCAF11-204ENST00000395454 C1orf195Q5TG92 126 aa8.62□□□□□ -1.03
SCAF11-204ENST00000395454 IGHV6-1A0A0B4J1U7 121 aa8.61□□□□□ -1.03
SCAF11-204ENST00000395454 HERC1Q15751 4861 aa8.6□□□□□ -1.03
SCAF11-204ENST00000395454 C8orf87E5RJ46 101 aa8.58□□□□□ -1.04
SCAF11-204ENST00000395454 SPAG11AQ6PDA7 123 aa8.58□□□□□ -1.04
SCAF11-204ENST00000395454 NOTCH2NLQ7Z3S9 236 aa8.58□□□□□ -1.04
SCAF11-204ENST00000395454 TP53AIP1Q9HCN2 124 aa8.58□□□□□ -1.04
SCAF11-204ENST00000395454 H3BPC8 53 aa8.56□□□□□ -1.04
SCAF11-204ENST00000395454 MRPL34Q9BQ48 92 aaKnown RBP8.56□□□□□ -1.04
SCAF11-204ENST00000395454 MP68P56378 58 aa8.54□□□□□ -1.04
SCAF11-204ENST00000395454 FAM236DA0A1B0GTK5 79 aa8.53□□□□□ -1.04
SCAF11-204ENST00000395454 FAM236CP0DP71 79 aa8.53□□□□□ -1.04
SCAF11-204ENST00000395454 TRAV22A0A0B4J277 110 aa8.52□□□□□ -1.05
SCAF11-204ENST00000395454 ATP5EP56381 51 aaPredicted RBP8.52□□□□□ -1.05
SCAF11-204ENST00000395454 RPS28P62857 69 aaKnown RBP8.52□□□□□ -1.05
SCAF11-204ENST00000395454 H0Y9P7 68 aa8.51□□□□□ -1.05
SCAF11-204ENST00000395454 LINC00313P59037 77 aa8.48□□□□□ -1.05
SCAF11-204ENST00000395454 Q8N9P0 234 aaPredicted RBP8.46□□□□□ -1.05
SCAF11-204ENST00000395454 LINC00208Q96KT6 92 aa8.46□□□□□ -1.05
SCAF11-204ENST00000395454 RETNLBQ9BQ08 111 aa8.46□□□□□ -1.05
SCAF11-204ENST00000395454 KRTAP16-1A8MUX0 517 aa8.46□□□□□ -1.06
SCAF11-204ENST00000395454 KRTAP13-3Q3SY46 172 aa8.45□□□□□ -1.06
SCAF11-204ENST00000395454 C1orf64Q8NEQ6 169 aa8.43□□□□□ -1.06
SCAF11-204ENST00000395454 NDUFS5O43920 106 aa8.42□□□□□ -1.06
SCAF11-204ENST00000395454 SERP1Q9Y6X1 66 aa8.41□□□□□ -1.06
SCAF11-204ENST00000395454 PRR4Q16378 134 aa8.39□□□□□ -1.07
SCAF11-204ENST00000395454 SPANXA2-OT1Q8N9U9 137 aa8.39□□□□□ -1.07
SCAF11-204ENST00000395454 Q5W150 140 aa8.37□□□□□ -1.07
SCAF11-204ENST00000395454 CYP4F30PQ9H0H9 118 aa8.37□□□□□ -1.07
SCAF11-204ENST00000395454 HMCN2Q8NDA2 5059 aa8.36□□□□□ -1.07
SCAF11-204ENST00000395454 LOC101927531A0A1B0GV80 90 aa8.34□□□□□ -1.07
SCAF11-204ENST00000395454 LPAP08519 4548 aa8.33□□□□□ -1.08
SCAF11-204ENST00000395454 FP248Q71RG6 208 aaPredicted RBP8.33□□□□□ -1.08
SCAF11-204ENST00000395454 IGLV7-46A0A075B6I9 117 aa8.31□□□□□ -1.08
SCAF11-204ENST00000395454 LRP2P98164 4655 aa8.28□□□□□ -1.08
SCAF11-204ENST00000395454 C20orf166-AS1Q96NR2 134 aa8.24□□□□□ -1.09
SCAF11-204ENST00000395454 IGKV2-30P06310 120 aa8.23□□□□□ -1.09
SCAF11-204ENST00000395454 A8MUU9 505 aa8.23□□□□□ -1.09
SCAF11-204ENST00000395454 PCOTHQ58A44 107 aa8.23□□□□□ -1.09
SCAF11-204ENST00000395454 TPRXLQ17RH7 258 aa8.21□□□□□ -1.09
SCAF11-204ENST00000395454 SMIM26A0A096LP01 95 aa8.21□□□□□ -1.1
SCAF11-204ENST00000395454 C9orf92A6NGG3 77 aa8.2□□□□□ -1.1
SCAF11-204ENST00000395454 Q75L30 129 aa8.13□□□□□ -1.11
SCAF11-204ENST00000395454 HRES1P13985 223 aa8.12□□□□□ -1.11
SCAF11-204ENST00000395454 XP32Q5T750 250 aa8.1□□□□□ -1.11
SCAF11-204ENST00000395454 LCE2DQ5TA82 110 aaPredicted RBP8.09□□□□□ -1.11
SCAF11-204ENST00000395454 DMAC1Q96GE9 116 aa8.09□□□□□ -1.11
SCAF11-204ENST00000395454 UBR4Q5T4S7 5183 aa8.08□□□□□ -1.12
SCAF11-204ENST00000395454 C7orf65Q6ZTY9 151 aa8.08□□□□□ -1.12
SCAF11-204ENST00000395454 COA5Q86WW8 74 aa8.08□□□□□ -1.12
SCAF11-204ENST00000395454 IGKV2D-30A0A075B6S6 120 aa8.07□□□□□ -1.12
SCAF11-204ENST00000395454 Q1T7F1 81 aa8.03□□□□□ -1.12
SCAF11-204ENST00000395454 ACYP2P14621 99 aa8.01□□□□□ -1.13
SCAF11-204ENST00000395454 C4orf26Q17RF5 130 aa8.01□□□□□ -1.13
SCAF11-204ENST00000395454 RPL37P61927 97 aaKnown RBP7.99□□□□□ -1.13
SCAF11-204ENST00000395454 MUC2Q02817 5179 aa7.97□□□□□ -1.13
SCAF11-204ENST00000395454 MPLKIPQ8TAP9 179 aa7.96□□□□□ -1.13
SCAF11-204ENST00000395454 SEC61BP60468 96 aaKnown RBP7.95□□□□□ -1.14
SCAF11-204ENST00000395454 V9GYY9 64 aa7.95□□□□□ -1.14
SCAF11-204ENST00000395454 RNF213Q63HN8 5207 aa7.95□□□□□ -1.14
SCAF11-204ENST00000395454 MUC17Q685J3 4493 aa7.94□□□□□ -1.14
SCAF11-204ENST00000395454 A8MUN3 132 aa7.93□□□□□ -1.14
SCAF11-204ENST00000395454 SPINK7P58062 85 aa7.93□□□□□ -1.14
SCAF11-204ENST00000395454 ATP11AUNQ6ZP68 121 aa7.92□□□□□ -1.14
SCAF11-204ENST00000395454 LINC01558Q9Y6Z2 57 aa7.86□□□□□ -1.15
SCAF11-204ENST00000395454 KRTAP3-1Q9BYR8 98 aa7.84□□□□□ -1.16
SCAF11-204ENST00000395454 CHKB-CPT1BH3BT56 60 aa7.83□□□□□ -1.16
SCAF11-204ENST00000395454 Q5VV11 94 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms