RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 LCE6AA0A183 80 aa6.32□□□□□ -1.4
HIF1A-203ENST00000394997 CHTF8P0CG12 524 aa6.31□□□□□ -1.4
HIF1A-203ENST00000394997 SPRR1BP22528 89 aa6.31□□□□□ -1.4
HIF1A-203ENST00000394997 RYR2Q92736 4967 aa6.3□□□□□ -1.4
HIF1A-203ENST00000394997 C1orf134Q5TEV5 83 aa6.3□□□□□ -1.4
HIF1A-203ENST00000394997 Q6ZR54 194 aa6.3□□□□□ -1.4
HIF1A-203ENST00000394997 PHF5AQ7RTV0 110 aaKnown RBP6.3□□□□□ -1.4
HIF1A-203ENST00000394997 A8MWP4 228 aa6.29□□□□□ -1.4
HIF1A-203ENST00000394997 C9orf163Q8N9P6 203 aa6.29□□□□□ -1.4
HIF1A-203ENST00000394997 C7orf65Q6ZTY9 151 aa6.28□□□□□ -1.4
HIF1A-203ENST00000394997 H3BPC8 53 aa6.28□□□□□ -1.4
HIF1A-203ENST00000394997 DYNC1H1Q14204 4646 aaKnown RBP6.27□□□□□ -1.41
HIF1A-203ENST00000394997 PRAC1Q96KF2 57 aa6.27□□□□□ -1.41
HIF1A-203ENST00000394997 KMT2CQ8NEZ4 4911 aaKnown RBP6.27□□□□□ -1.41
HIF1A-203ENST00000394997 PRR26Q8N8Z3 221 aa6.26□□□□□ -1.41
HIF1A-203ENST00000394997 SPACA4Q8TDM5 124 aa6.26□□□□□ -1.41
HIF1A-203ENST00000394997 NBDYA0A0U1RRE5 68 aa6.26□□□□□ -1.41
HIF1A-203ENST00000394997 ZCCHC13Q8WW36 166 aaKnown RBP6.25□□□□□ -1.41
HIF1A-203ENST00000394997 CDC42SE1Q9NRR8 79 aa6.25□□□□□ -1.41
HIF1A-203ENST00000394997 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.25□□□□□ -1.41
HIF1A-203ENST00000394997 LCA10Q71F78 164 aa6.24□□□□□ -1.41
HIF1A-203ENST00000394997 SPANXA2-OT1Q8N9U9 137 aa6.24□□□□□ -1.41
HIF1A-203ENST00000394997 SPINK1P00995 79 aa6.23□□□□□ -1.41
HIF1A-203ENST00000394997 A0A1B0GU69 56 aa6.22□□□□□ -1.41
HIF1A-203ENST00000394997 SPINK7P58062 85 aa6.22□□□□□ -1.41
HIF1A-203ENST00000394997 Q96NJ1 140 aa6.22□□□□□ -1.41
HIF1A-203ENST00000394997 LINC00483Q53H64 154 aa6.21□□□□□ -1.42
HIF1A-203ENST00000394997 Q75L30 129 aa6.21□□□□□ -1.42
HIF1A-203ENST00000394997 MOBPQ13875 183 aa6.2□□□□□ -1.42
HIF1A-203ENST00000394997 CIRBP-AS1Q8TBR5 109 aa6.2□□□□□ -1.42
HIF1A-203ENST00000394997 TP53AIP1Q9HCN2 124 aa6.2□□□□□ -1.42
HIF1A-203ENST00000394997 IGLV5-52A0A0A0MRZ9 124 aa6.2□□□□□ -1.42
HIF1A-203ENST00000394997 TNXBP22105 4242 aa6.2□□□□□ -1.42
HIF1A-203ENST00000394997 ASB16-AS1Q495Z4 193 aa6.19□□□□□ -1.42
HIF1A-203ENST00000394997 HSPG2P98160 4391 aa6.19□□□□□ -1.42
HIF1A-203ENST00000394997 KRTAP29-1A8MX34 341 aaPredicted RBP6.19□□□□□ -1.42
HIF1A-203ENST00000394997 FAT3Q8TDW7 4589 aa6.18□□□□□ -1.42
HIF1A-203ENST00000394997 SMR3BP02814 79 aaPredicted RBP6.18□□□□□ -1.42
HIF1A-203ENST00000394997 C14orf177Q52M58 125 aa6.18□□□□□ -1.42
HIF1A-203ENST00000394997 ANAPC11Q9NYG5 84 aa6.18□□□□□ -1.42
HIF1A-203ENST00000394997 C8orf17Q9NRJ1 99 aa6.17□□□□□ -1.42
HIF1A-203ENST00000394997 IGLV7-46A0A075B6I9 117 aa6.17□□□□□ -1.42
HIF1A-203ENST00000394997 A0A087WTM6 91 aa6.17□□□□□ -1.42
HIF1A-203ENST00000394997 J3QL48 77 aa6.17□□□□□ -1.42
HIF1A-203ENST00000394997 LINC00472Q9H8W2 130 aa6.17□□□□□ -1.42
HIF1A-203ENST00000394997 C8orf87E5RJ46 101 aa6.17□□□□□ -1.42
HIF1A-203ENST00000394997 ACYP2P14621 99 aa6.16□□□□□ -1.42
HIF1A-203ENST00000394997 RYR3Q15413 4870 aa6.16□□□□□ -1.42
HIF1A-203ENST00000394997 C4orf48Q5BLP8 95 aa6.15□□□□□ -1.42
HIF1A-203ENST00000394997 LINC00313P59037 77 aa6.15□□□□□ -1.43
HIF1A-203ENST00000394997 IGKV2D-30A0A075B6S6 120 aa6.15□□□□□ -1.43
HIF1A-203ENST00000394997 IGKV2-30P06310 120 aa6.15□□□□□ -1.43
HIF1A-203ENST00000394997 MRPL34Q9BQ48 92 aaKnown RBP6.15□□□□□ -1.43
HIF1A-203ENST00000394997 PLAC8Q9NZF1 115 aa6.15□□□□□ -1.43
HIF1A-203ENST00000394997 FAT1Q14517 4588 aa6.13□□□□□ -1.43
HIF1A-203ENST00000394997 MMP24-AS1A0A0U1RRL7 71 aa6.13□□□□□ -1.43
HIF1A-203ENST00000394997 HRES1P13985 223 aa6.13□□□□□ -1.43
HIF1A-203ENST00000394997 LINC01558Q9Y6Z2 57 aa6.12□□□□□ -1.43
HIF1A-203ENST00000394997 H3BS24 57 aa6.11□□□□□ -1.43
HIF1A-203ENST00000394997 A0A1B0GVX0 72 aa6.1□□□□□ -1.43
HIF1A-203ENST00000394997 Q6ZSA8 131 aa6.1□□□□□ -1.43
HIF1A-203ENST00000394997 FAM229AH3BQW9 127 aa6.09□□□□□ -1.43
HIF1A-203ENST00000394997 A6NN06 94 aa6.09□□□□□ -1.43
HIF1A-203ENST00000394997 ZNF706Q9Y5V0 76 aaPredicted RBP6.09□□□□□ -1.43
HIF1A-203ENST00000394997 ADM2Q7Z4H4 148 aa6.09□□□□□ -1.43
HIF1A-203ENST00000394997 MIR22HGQ0VDD5 57 aa6.08□□□□□ -1.44
HIF1A-203ENST00000394997 LINC01554Q52M75 96 aa6.07□□□□□ -1.44
HIF1A-203ENST00000394997 UQCR11O14957 56 aa6.06□□□□□ -1.44
HIF1A-203ENST00000394997 PSORS1C2Q9UIG4 136 aa6.06□□□□□ -1.44
HIF1A-203ENST00000394997 RTL8CO15255 209 aa6.06□□□□□ -1.44
HIF1A-203ENST00000394997 KRTAP10-2P60368 255 aa6.06□□□□□ -1.44
HIF1A-203ENST00000394997 KRTAP13-3Q3SY46 172 aa6.03□□□□□ -1.44
HIF1A-203ENST00000394997 KRTAP21-3Q3LHN1 58 aa6.02□□□□□ -1.45
HIF1A-203ENST00000394997 CSAG1Q6PB30 78 aa6□□□□□ -1.45
HIF1A-203ENST00000394997 A0A087X002 238 aa5.99□□□□□ -1.45
HIF1A-203ENST00000394997 NOTCH2NLQ7Z3S9 236 aa5.99□□□□□ -1.45
HIF1A-203ENST00000394997 KRTAP1-4P0C5Y4 121 aa5.98□□□□□ -1.45
HIF1A-203ENST00000394997 ZNF861PO60384 105 aa5.98□□□□□ -1.45
HIF1A-203ENST00000394997 KRTAP10-4P60372 401 aaPredicted RBP5.97□□□□□ -1.45
HIF1A-203ENST00000394997 LRP1Q07954 4544 aaKnown RBP5.96□□□□□ -1.46
HIF1A-203ENST00000394997 K7ERS5 55 aa5.96□□□□□ -1.46
HIF1A-203ENST00000394997 KRTAP13-2Q52LG2 175 aa5.96□□□□□ -1.46
HIF1A-203ENST00000394997 KRTAP10-1P60331 282 aa5.95□□□□□ -1.46
HIF1A-203ENST00000394997 IGLV7-43P04211 117 aa5.94□□□□□ -1.46
HIF1A-203ENST00000394997 Q5W150 140 aa5.93□□□□□ -1.46
HIF1A-203ENST00000394997 Q8N1X5 172 aa5.93□□□□□ -1.46
HIF1A-203ENST00000394997 CRIPTQ9P021 101 aa5.92□□□□□ -1.46
HIF1A-203ENST00000394997 SSBP3-AS1Q7Z2R9 100 aa5.91□□□□□ -1.46
HIF1A-203ENST00000394997 RYR1P21817 5038 aa5.9□□□□□ -1.46
HIF1A-203ENST00000394997 A0A1B0GVY2 172 aa5.9□□□□□ -1.47
HIF1A-203ENST00000394997 KRTAP16-1A8MUX0 517 aa5.9□□□□□ -1.47
HIF1A-203ENST00000394997 PLA2G1BP04054 148 aaKnown RBP5.88□□□□□ -1.47
HIF1A-203ENST00000394997 EPPK1P58107 5090 aaKnown RBP5.85□□□□□ -1.47
HIF1A-203ENST00000394997 KRTAP17-1Q9BYP8 105 aa5.84□□□□□ -1.47
HIF1A-203ENST00000394997 MYCBP2O75592 4640 aa5.83□□□□□ -1.48
HIF1A-203ENST00000394997 SPINT4Q6UDR6 99 aa5.82□□□□□ -1.48
HIF1A-203ENST00000394997 LPAP08519 4548 aa5.82□□□□□ -1.48
HIF1A-203ENST00000394997 DMAC1Q96GE9 116 aa5.81□□□□□ -1.48
HIF1A-203ENST00000394997 SPATA8Q6RVD6 105 aa5.8□□□□□ -1.48
HIF1A-203ENST00000394997 C9orf92A6NGG3 77 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms