RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 ZCCHC13Q8WW36 166 aaKnown RBP3.03□□□□□ -1.92
SMARCAD1-203ENST00000394961 TRACP01848 142 aa3.03□□□□□ -1.92
SMARCAD1-203ENST00000394961 KRTAP4-7Q9BYR0 210 aa3.03□□□□□ -1.92
SMARCAD1-203ENST00000394961 ORMDL1Q9P0S3 153 aa3.03□□□□□ -1.92
SMARCAD1-203ENST00000394961 SCGB1A1P11684 91 aa3.02□□□□□ -1.93
SMARCAD1-203ENST00000394961 ANKRD29Q8N6D5 301 aa3.02□□□□□ -1.93
SMARCAD1-203ENST00000394961 GPR98Q8WXG9 6306 aa3.01□□□□□ -1.93
SMARCAD1-203ENST00000394961 IGKV4-1P06312 121 aa3.01□□□□□ -1.93
SMARCAD1-203ENST00000394961 SMIM6P0DI80 62 aa3.01□□□□□ -1.93
SMARCAD1-203ENST00000394961 WFDC13Q8IUB5 93 aa3.01□□□□□ -1.93
SMARCAD1-203ENST00000394961 TRIAP1O43715 76 aa3.01□□□□□ -1.93
SMARCAD1-203ENST00000394961 C14orf144Q96I85 54 aa3□□□□□ -1.93
SMARCAD1-203ENST00000394961 SIGMAR1Q99720 223 aa3□□□□□ -1.93
SMARCAD1-203ENST00000394961 KRTAP10-10P60014 251 aa3□□□□□ -1.93
SMARCAD1-203ENST00000394961 FAM236DA0A1B0GTK5 79 aa2.99□□□□□ -1.93
SMARCAD1-203ENST00000394961 FAM236CP0DP71 79 aa2.99□□□□□ -1.93
SMARCAD1-203ENST00000394961 HSD52Q0P140 79 aa2.99□□□□□ -1.93
SMARCAD1-203ENST00000394961 LOC110117498A0A087WWA1 95 aa2.98□□□□□ -1.93
SMARCAD1-203ENST00000394961 KRTAP20-1Q3LI63 56 aa2.98□□□□□ -1.93
SMARCAD1-203ENST00000394961 SPATA45Q537H7 98 aa2.98□□□□□ -1.93
SMARCAD1-203ENST00000394961 COX6CP09669 75 aa2.97□□□□□ -1.93
SMARCAD1-203ENST00000394961 PDE6GP18545 87 aa2.97□□□□□ -1.93
SMARCAD1-203ENST00000394961 FCGBPQ9Y6R7 5405 aaPredicted RBP2.97□□□□□ -1.93
SMARCAD1-203ENST00000394961 DNAL4O96015 105 aa2.97□□□□□ -1.93
SMARCAD1-203ENST00000394961 CCKP06307 115 aa2.96□□□□□ -1.94
SMARCAD1-203ENST00000394961 FXYD2P54710 66 aa2.96□□□□□ -1.94
SMARCAD1-203ENST00000394961 C5orf47Q569G3 176 aa2.96□□□□□ -1.94
SMARCAD1-203ENST00000394961 VAMP8Q9BV40 100 aa2.96□□□□□ -1.94
SMARCAD1-203ENST00000394961 FABP2P12104 132 aa2.96□□□□□ -1.94
SMARCAD1-203ENST00000394961 SPINK7P58062 85 aa2.96□□□□□ -1.94
SMARCAD1-203ENST00000394961 A0A1B0GV90 55 aa2.96□□□□□ -1.94
SMARCAD1-203ENST00000394961 Q6ZQT0 140 aa2.96□□□□□ -1.94
SMARCAD1-203ENST00000394961 TMEM254Q8TBM7 123 aa2.96□□□□□ -1.94
SMARCAD1-203ENST00000394961 RBM3P98179 157 aaKnown RBP2.95□□□□□ -1.94
SMARCAD1-203ENST00000394961 DSCR8Q96T75 97 aa2.95□□□□□ -1.94
SMARCAD1-203ENST00000394961 C8orf17Q9NRJ1 99 aa2.95□□□□□ -1.94
SMARCAD1-203ENST00000394961 JMJD7-PLA2G4BH0Y9G9 81 aa2.94□□□□□ -1.94
SMARCAD1-203ENST00000394961 H1FX-AS1Q4G0G2 97 aa2.94□□□□□ -1.94
SMARCAD1-203ENST00000394961 IGHV6-1A0A0B4J1U7 121 aa2.94□□□□□ -1.94
SMARCAD1-203ENST00000394961 LCE1DQ5T752 114 aa2.94□□□□□ -1.94
SMARCAD1-203ENST00000394961 NDUFB1O75438 58 aa2.93□□□□□ -1.94
SMARCAD1-203ENST00000394961 KRTAP9-9Q9BYP9 154 aa2.93□□□□□ -1.94
SMARCAD1-203ENST00000394961 KRTAP9-4Q9BYQ2 154 aa2.93□□□□□ -1.94
SMARCAD1-203ENST00000394961 PAM16Q9Y3D7 125 aa2.92□□□□□ -1.94
SMARCAD1-203ENST00000394961 NEBP20929 6669 aa2.92□□□□□ -1.94
SMARCAD1-203ENST00000394961 KRTAP19-8Q3LI54 63 aa2.92□□□□□ -1.94
SMARCAD1-203ENST00000394961 C9JAW5 83 aa2.91□□□□□ -1.94
SMARCAD1-203ENST00000394961 PRR15Q8IV56 129 aa2.91□□□□□ -1.94
SMARCAD1-203ENST00000394961 IGKV3D-7A0A0C4DH55 119 aa2.91□□□□□ -1.94
SMARCAD1-203ENST00000394961 SEC61GP60059 68 aa2.9□□□□□ -1.94
SMARCAD1-203ENST00000394961 UQCR10Q9UDW1 63 aa2.9□□□□□ -1.94
SMARCAD1-203ENST00000394961 MMP24-AS1A0A0U1RRL7 71 aa2.9□□□□□ -1.94
SMARCAD1-203ENST00000394961 Q6ZVQ6 151 aa2.9□□□□□ -1.94
SMARCAD1-203ENST00000394961 MRPL34Q9BQ48 92 aaKnown RBP2.89□□□□□ -1.95
SMARCAD1-203ENST00000394961 KRTAP4-12Q9BQ66 201 aa2.89□□□□□ -1.95
SMARCAD1-203ENST00000394961 PSMB2P49721 201 aa2.89□□□□□ -1.95
SMARCAD1-203ENST00000394961 KRTAP5-9P26371 169 aa2.89□□□□□ -1.95
SMARCAD1-203ENST00000394961 SPRR2GQ9BYE4 73 aa2.89□□□□□ -1.95
SMARCAD1-203ENST00000394961 BAALC-AS2P0C853 105 aa2.88□□□□□ -1.95
SMARCAD1-203ENST00000394961 KRTAP4-9Q9BYQ8 210 aa2.88□□□□□ -1.95
SMARCAD1-203ENST00000394961 ATXN8Q156A1 80 aa2.87□□□□□ -1.95
SMARCAD1-203ENST00000394961 PYY3Q5JQD4 70 aa2.87□□□□□ -1.95
SMARCAD1-203ENST00000394961 DEFB116Q30KQ4 102 aa2.86□□□□□ -1.95
SMARCAD1-203ENST00000394961 K7ERJ3 54 aa2.86□□□□□ -1.95
SMARCAD1-203ENST00000394961 C7orf65Q6ZTY9 151 aa2.86□□□□□ -1.95
SMARCAD1-203ENST00000394961 MT1BP07438 61 aa2.85□□□□□ -1.95
SMARCAD1-203ENST00000394961 KRTAP5-3Q6L8H2 238 aa2.85□□□□□ -1.95
SMARCAD1-203ENST00000394961 KRTAP10-5P60370 271 aa2.85□□□□□ -1.95
SMARCAD1-203ENST00000394961 LYRM7Q5U5X0 104 aa2.85□□□□□ -1.95
SMARCAD1-203ENST00000394961 SYNE2Q8WXH0 6885 aaKnown RBP2.84□□□□□ -1.95
SMARCAD1-203ENST00000394961 CRIPTQ9P021 101 aa2.84□□□□□ -1.95
SMARCAD1-203ENST00000394961 hDV103S1A0JD37 113 aa2.84□□□□□ -1.96
SMARCAD1-203ENST00000394961 M0R143 59 aa2.84□□□□□ -1.96
SMARCAD1-203ENST00000394961 CXCL6P80162 114 aa2.84□□□□□ -1.96
SMARCAD1-203ENST00000394961 H3BT86 120 aa2.83□□□□□ -1.96
SMARCAD1-203ENST00000394961 K7EQZ3 153 aa2.83□□□□□ -1.96
SMARCAD1-203ENST00000394961 PCP4L1A6NKN8 68 aa2.83□□□□□ -1.96
SMARCAD1-203ENST00000394961 SCGB1C2P0DMR2 95 aa2.82□□□□□ -1.96
SMARCAD1-203ENST00000394961 NREPQ16612 68 aa2.82□□□□□ -1.96
SMARCAD1-203ENST00000394961 Q5VV11 94 aa2.82□□□□□ -1.96
SMARCAD1-203ENST00000394961 A0A1B0GV72 72 aa2.81□□□□□ -1.96
SMARCAD1-203ENST00000394961 MACF1Q9UPN3 7388 aaKnown RBP2.81□□□□□ -1.96
SMARCAD1-203ENST00000394961 VPS25Q9BRG1 176 aa2.81□□□□□ -1.96
SMARCAD1-203ENST00000394961 KRTAP4-2Q9BYR5 136 aa2.8□□□□□ -1.96
SMARCAD1-203ENST00000394961 Q5W150 140 aa2.8□□□□□ -1.96
SMARCAD1-203ENST00000394961 H0YAA0 97 aa2.79□□□□□ -1.96
SMARCAD1-203ENST00000394961 IGKV2-30P06310 120 aa2.79□□□□□ -1.96
SMARCAD1-203ENST00000394961 RPS28P62857 69 aaKnown RBP2.79□□□□□ -1.96
SMARCAD1-203ENST00000394961 KLKP1Q107X0 134 aa2.78□□□□□ -1.96
SMARCAD1-203ENST00000394961 KRTAP3-1Q9BYR8 98 aa2.78□□□□□ -1.96
SMARCAD1-203ENST00000394961 C14orf132Q9NPU4 83 aa2.78□□□□□ -1.96
SMARCAD1-203ENST00000394961 A6NN06 94 aa2.77□□□□□ -1.97
SMARCAD1-203ENST00000394961 SMCPP49901 116 aaPredicted RBP2.77□□□□□ -1.97
SMARCAD1-203ENST00000394961 TP53AIP1Q9HCN2 124 aa2.77□□□□□ -1.97
SMARCAD1-203ENST00000394961 BPY2O14599 106 aa2.76□□□□□ -1.97
SMARCAD1-203ENST00000394961 S4R3F8 94 aa2.76□□□□□ -1.97
SMARCAD1-203ENST00000394961 CSAG1Q6PB30 78 aa2.76□□□□□ -1.97
SMARCAD1-203ENST00000394961 CASC2Q6XLA1 102 aa2.76□□□□□ -1.97
SMARCAD1-203ENST00000394961 C9orf118A6NHY6 69 aa2.74□□□□□ -1.97
SMARCAD1-203ENST00000394961 KRTAP2-3P0C7H8 128 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms