RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 LINC00208Q96KT6 92 aa8.98□□□□□ -0.97
CPSF7-202ENST00000394888 A0A1B0GVX0 72 aa8.97□□□□□ -0.97
CPSF7-202ENST00000394888 KRTAP13-2Q52LG2 175 aa8.97□□□□□ -0.97
CPSF7-202ENST00000394888 LINC00336Q6ZUF6 198 aa8.95□□□□□ -0.98
CPSF7-202ENST00000394888 PRR4Q16378 134 aa8.94□□□□□ -0.98
CPSF7-202ENST00000394888 RYR2Q92736 4967 aa8.93□□□□□ -0.98
CPSF7-202ENST00000394888 KRTAP1-4P0C5Y4 121 aa8.93□□□□□ -0.98
CPSF7-202ENST00000394888 H3BPC8 53 aa8.93□□□□□ -0.98
CPSF7-202ENST00000394888 SPANXA2-OT1Q8N9U9 137 aa8.92□□□□□ -0.98
CPSF7-202ENST00000394888 CD164Q04900 197 aa8.9□□□□□ -0.98
CPSF7-202ENST00000394888 KMT2CQ8NEZ4 4911 aaKnown RBP8.9□□□□□ -0.98
CPSF7-202ENST00000394888 IGHV6-1A0A0B4J1U7 121 aa8.89□□□□□ -0.99
CPSF7-202ENST00000394888 MP68P56378 58 aa8.89□□□□□ -0.99
CPSF7-202ENST00000394888 Q5W150 140 aa8.88□□□□□ -0.99
CPSF7-202ENST00000394888 Q1T7F1 81 aa8.88□□□□□ -0.99
CPSF7-202ENST00000394888 FAT1Q14517 4588 aa8.88□□□□□ -0.99
CPSF7-202ENST00000394888 NDUFB1O75438 58 aa8.87□□□□□ -0.99
CPSF7-202ENST00000394888 MPLKIPQ8TAP9 179 aa8.87□□□□□ -0.99
CPSF7-202ENST00000394888 MRPL34Q9BQ48 92 aaKnown RBP8.85□□□□□ -0.99
CPSF7-202ENST00000394888 Q8N9P0 234 aaPredicted RBP8.84□□□□□ -0.99
CPSF7-202ENST00000394888 IGLV7-46A0A075B6I9 117 aa8.84□□□□□ -0.99
CPSF7-202ENST00000394888 TP53AIP1Q9HCN2 124 aa8.83□□□□□ -1
CPSF7-202ENST00000394888 KRTAP16-1A8MUX0 517 aa8.82□□□□□ -1
CPSF7-202ENST00000394888 SSBP3-AS1Q7Z2R9 100 aa8.81□□□□□ -1
CPSF7-202ENST00000394888 KRTAP21-3Q3LHN1 58 aa8.79□□□□□ -1
CPSF7-202ENST00000394888 C1orf195Q5TG92 126 aa8.79□□□□□ -1
CPSF7-202ENST00000394888 SPINK6Q6UWN8 80 aa8.76□□□□□ -1.01
CPSF7-202ENST00000394888 PCOTHQ58A44 107 aa8.75□□□□□ -1.01
CPSF7-202ENST00000394888 TNXBP22105 4242 aa8.74□□□□□ -1.01
CPSF7-202ENST00000394888 KRTAP10-4P60372 401 aaPredicted RBP8.74□□□□□ -1.01
CPSF7-202ENST00000394888 PRO0628Q9UI54 55 aa8.72□□□□□ -1.01
CPSF7-202ENST00000394888 COA5Q86WW8 74 aa8.71□□□□□ -1.02
CPSF7-202ENST00000394888 Q5VV11 94 aa8.7□□□□□ -1.02
CPSF7-202ENST00000394888 A0A1B0GVY2 172 aa8.69□□□□□ -1.02
CPSF7-202ENST00000394888 HRES1P13985 223 aa8.68□□□□□ -1.02
CPSF7-202ENST00000394888 A8MU10 97 aa8.68□□□□□ -1.02
CPSF7-202ENST00000394888 NDUFS5O43920 106 aa8.68□□□□□ -1.02
CPSF7-202ENST00000394888 RYR3Q15413 4870 aa8.67□□□□□ -1.02
CPSF7-202ENST00000394888 PSPHP1O15172 72 aa8.66□□□□□ -1.02
CPSF7-202ENST00000394888 HSPG2P98160 4391 aa8.66□□□□□ -1.02
CPSF7-202ENST00000394888 A8MUN3 132 aa8.66□□□□□ -1.02
CPSF7-202ENST00000394888 C8orf87E5RJ46 101 aa8.66□□□□□ -1.02
CPSF7-202ENST00000394888 CDK2AP2O75956 126 aa8.65□□□□□ -1.02
CPSF7-202ENST00000394888 LOC101927531A0A1B0GV80 90 aa8.61□□□□□ -1.03
CPSF7-202ENST00000394888 LINC00313P59037 77 aa8.61□□□□□ -1.03
CPSF7-202ENST00000394888 LRP1Q07954 4544 aaKnown RBP8.61□□□□□ -1.03
CPSF7-202ENST00000394888 BRK1Q8WUW1 75 aa8.61□□□□□ -1.03
CPSF7-202ENST00000394888 FAT3Q8TDW7 4589 aa8.61□□□□□ -1.03
CPSF7-202ENST00000394888 PLA2G1BP04054 148 aaKnown RBP8.57□□□□□ -1.04
CPSF7-202ENST00000394888 IGKV2-30P06310 120 aa8.57□□□□□ -1.04
CPSF7-202ENST00000394888 PRR26Q8N8Z3 221 aa8.53□□□□□ -1.04
CPSF7-202ENST00000394888 DMAC1Q96GE9 116 aa8.53□□□□□ -1.04
CPSF7-202ENST00000394888 RETNLBQ9BQ08 111 aa8.52□□□□□ -1.05
CPSF7-202ENST00000394888 LINC01558Q9Y6Z2 57 aa8.52□□□□□ -1.05
CPSF7-202ENST00000394888 Q75L30 129 aa8.51□□□□□ -1.05
CPSF7-202ENST00000394888 TYMSOSQ8TAI1 123 aa8.51□□□□□ -1.05
CPSF7-202ENST00000394888 LIMD2Q9BT23 127 aa8.51□□□□□ -1.05
CPSF7-202ENST00000394888 V9GYY9 64 aa8.5□□□□□ -1.05
CPSF7-202ENST00000394888 FAM229AH3BQW9 127 aa8.5□□□□□ -1.05
CPSF7-202ENST00000394888 SPINK1P00995 79 aa8.5□□□□□ -1.05
CPSF7-202ENST00000394888 SMR3BP02814 79 aaPredicted RBP8.48□□□□□ -1.05
CPSF7-202ENST00000394888 RPS29P62273 56 aaKnown RBP8.48□□□□□ -1.05
CPSF7-202ENST00000394888 LCA10Q71F78 164 aa8.48□□□□□ -1.05
CPSF7-202ENST00000394888 PRR15LQ9BU68 103 aa8.47□□□□□ -1.05
CPSF7-202ENST00000394888 SPAG11AQ6PDA7 123 aa8.47□□□□□ -1.05
CPSF7-202ENST00000394888 KRTAP17-1Q9BYP8 105 aa8.47□□□□□ -1.05
CPSF7-202ENST00000394888 RYR1P21817 5038 aa8.44□□□□□ -1.06
CPSF7-202ENST00000394888 LINC00304Q8N9R0 145 aa8.41□□□□□ -1.06
CPSF7-202ENST00000394888 SPINK7P58062 85 aa8.38□□□□□ -1.07
CPSF7-202ENST00000394888 CHKB-CPT1BH3BT56 60 aa8.37□□□□□ -1.07
CPSF7-202ENST00000394888 ACYP2P14621 99 aa8.36□□□□□ -1.07
CPSF7-202ENST00000394888 MYCBP2O75592 4640 aa8.36□□□□□ -1.07
CPSF7-202ENST00000394888 FLG2Q5D862 2391 aaPredicted RBP8.35□□□□□ -1.07
CPSF7-202ENST00000394888 C20orf166-AS1Q96NR2 134 aa8.34□□□□□ -1.07
CPSF7-202ENST00000394888 A8MUU9 505 aa8.33□□□□□ -1.08
CPSF7-202ENST00000394888 IGKV2D-30A0A075B6S6 120 aa8.33□□□□□ -1.08
CPSF7-202ENST00000394888 C4orf48Q5BLP8 95 aa8.31□□□□□ -1.08
CPSF7-202ENST00000394888 KRTAP3-1Q9BYR8 98 aa8.31□□□□□ -1.08
CPSF7-202ENST00000394888 EPPK1P58107 5090 aaKnown RBP8.3□□□□□ -1.08
CPSF7-202ENST00000394888 LPAP08519 4548 aa8.29□□□□□ -1.08
CPSF7-202ENST00000394888 CDC42SE1Q9NRR8 79 aa8.28□□□□□ -1.08
CPSF7-202ENST00000394888 KIAA1109Q2LD37 5005 aa8.27□□□□□ -1.09
CPSF7-202ENST00000394888 C9orf92A6NGG3 77 aa8.25□□□□□ -1.09
CPSF7-202ENST00000394888 A6NED7 52 aa8.23□□□□□ -1.09
CPSF7-202ENST00000394888 A6NN06 94 aa8.23□□□□□ -1.09
CPSF7-202ENST00000394888 Q8N1X5 172 aa8.23□□□□□ -1.09
CPSF7-202ENST00000394888 KRTAP10-8P60410 259 aa8.21□□□□□ -1.09
CPSF7-202ENST00000394888 C7orf65Q6ZTY9 151 aa8.21□□□□□ -1.1
CPSF7-202ENST00000394888 ATP11AUNQ6ZP68 121 aa8.18□□□□□ -1.1
CPSF7-202ENST00000394888 ABCA13Q86UQ4 5058 aa8.16□□□□□ -1.1
CPSF7-202ENST00000394888 PMAIP1Q13794 54 aa8.09□□□□□ -1.11
CPSF7-202ENST00000394888 SPATA8Q6RVD6 105 aa8.09□□□□□ -1.11
CPSF7-202ENST00000394888 A0A1B0GU69 56 aa8.08□□□□□ -1.12
CPSF7-202ENST00000394888 MT1HL1P0DM35 61 aa8.07□□□□□ -1.12
CPSF7-202ENST00000394888 SPTSSBQ8NFR3 76 aa8.07□□□□□ -1.12
CPSF7-202ENST00000394888 LRP2P98164 4655 aa8.06□□□□□ -1.12
CPSF7-202ENST00000394888 Q5VSD8 79 aa8.06□□□□□ -1.12
CPSF7-202ENST00000394888 KTN1-AS1Q86SY8 53 aa7.99□□□□□ -1.13
CPSF7-202ENST00000394888 KRTAP3-3Q9BYR6 98 aa7.98□□□□□ -1.13
CPSF7-202ENST00000394888 XP32Q5T750 250 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms